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Sed0018131 (gene) of Chayote v1 genome

Gene IDSed0018131
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:384186..385152
RNA-Seq ExpressionSed0018131
SyntenySed0018131
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594423.1 hypothetical protein SDJN03_10976, partial [Cucurbita argyrosperma subsp. sororia]8.6e-5383.85Show/hide
Query:  LAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVCGITGV
        +AA A+YL  I+AIAAALE+RPSEHGLEFQS P AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA CGITGV
Subjt:  LAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVCGITGV

Query:  ALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
         LLVGSTL+YI+KVKNQRSLPLSSNN+NHK
Subjt:  ALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

XP_022925668.1 uncharacterized protein LOC111433017 [Cucurbita moschata]1.5e-5280Show/hide
Query:  MKIPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATA
        M IPIK +AA  ++LPLI+A+A+ALE+RPSEHGLEFQSPPPAG +SSPEMRSFF GTSSP P+  LPLPK M+S EAPGWWTHRDGGNKR+RNALLVATA
Subjt:  MKIPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATA

Query:  VCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN
         CGITGV LLVGSTLFYIYKVKNQ  LPLSSNNN+
Subjt:  VCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN

XP_022926736.1 uncharacterized protein LOC111433768 [Cucurbita moschata]1.0e-5382.96Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        I IK +AA A+YL  I+AIAAALE+RPSEHGLEFQS P AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
        GITGV LLVGSTL+YI+KVKNQRSLPLSSNN+NHK
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

XP_023003567.1 uncharacterized protein LOC111497130 [Cucurbita maxima]1.6e-5482.96Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        I IK +AA A+YL  I+AI AALE+RPSEHGLEFQSPP AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
        G+TGV LLVGSTL+YI+KVKNQRSLPLSSNNNNHK
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

XP_023518243.1 uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]7.0e-5583.7Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        I IK +AA A+YL  I+AIAAALE+RPSEHGLEFQSPP AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
        GITGV LLVGSTL+YI+KVKNQRSLPLSSNN+NHK
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

TrEMBL top hitse value%identityAlignment
A0A0A0KM65 Uncharacterized protein1.8e-4874.44Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        IPIK  AA   +  LI +IAA  E+RPSEHGLEFQSPPP G +SSPEMRSFFGG +SPTPEV LP+PKT++S E+PGWW H DGGNKRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN
        GITGV LLVGSTLFYI+K KN+RS+PLS NNN+
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN

A0A6J1CZN3 uncharacterized protein LOC1110157291.4e-4876.64Show/hide
Query:  IPIKFLAAAALYLPLIIAIAA----ALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVA
        IPIK  AA A+ LPLI+A+ A    ALE+RPSEHGLEFQSPPPAG +SSPEM SFFGG SSPTP+  LPLPK M+S EAPGWWT RDGG+ RLRNALLVA
Subjt:  IPIKFLAAAALYLPLIIAIAA----ALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVA

Query:  TAVCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN
        TA  GITGV LLVGS LFY+YKVKNQRSLPLSSNNN+
Subjt:  TAVCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN

A0A6J1EFQ9 uncharacterized protein LOC1114337684.9e-5482.96Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        I IK +AA A+YL  I+AIAAALE+RPSEHGLEFQS P AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
        GITGV LLVGSTL+YI+KVKNQRSLPLSSNN+NHK
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

A0A6J1EFW4 uncharacterized protein LOC1114330177.1e-5380Show/hide
Query:  MKIPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATA
        M IPIK +AA  ++LPLI+A+A+ALE+RPSEHGLEFQSPPPAG +SSPEMRSFF GTSSP P+  LPLPK M+S EAPGWWTHRDGGNKR+RNALLVATA
Subjt:  MKIPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATA

Query:  VCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN
         CGITGV LLVGSTLFYIYKVKNQ  LPLSSNNN+
Subjt:  VCGITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN

A0A6J1KMY3 uncharacterized protein LOC1114971307.6e-5582.96Show/hide
Query:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC
        I IK +AA A+YL  I+AI AALE+RPSEHGLEFQSPP AG +SSPEMRSFFGGTSSPTPEV LPLPK M+S EAPGWWTHRDGG+KRLRNALLVATA C
Subjt:  IPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVC

Query:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK
        G+TGV LLVGSTL+YI+KVKNQRSLPLSSNNNNHK
Subjt:  GITGVALLVGSTLFYIYKVKNQRSLPLSSNNNNHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein1.2e-0737.7Show/hide
Query:  IAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSS-PTPEVELPLPKTMDSG-EAPGWWTHRDGGNKRLRN-ALLVATAVCGITGVALLVGSTLFY
        I  A E+RPS+HGLE+   P   G+SS EM SFFG  SS     +  P    + S  ++P     +D  + R+ N  L+V + VCG++GVAL+V S L Y
Subjt:  IAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSS-PTPEVELPLPKTMDSG-EAPGWWTHRDGGNKRLRN-ALLVATAVCGITGVALLVGSTLFY

Query:  I--YKVKNQRSLPLSSNNNNHK
           Y      S+     +NN K
Subjt:  I--YKVKNQRSLPLSSNNNNHK

AT4G21740.1 unknown protein3.2e-1337.88Show/hide
Query:  YLPLIIAIAAALEVRPSEHGLEFQ-SPPPAGGQSSP-EMRSFFGG--TSSPTPEVELPLPK--TMDSGEAPGWWTHRDGGNKR----LRNALLVATAVCG
        +L +    + A E+RPS+HGL++Q S PP    S P +M+SFFG   +SSP P     LPK    D G+   WW  RDG   R    +R+  L A+ +CG
Subjt:  YLPLIIAIAAALEVRPSEHGLEFQ-SPPPAGGQSSP-EMRSFFGG--TSSPTPEVELPLPK--TMDSGEAPGWWTHRDGGNKR----LRNALLVATAVCG

Query:  ITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN
        ++GVALLV  TL Y ++ +        + N++
Subjt:  ITGVALLVGSTLFYIYKVKNQRSLPLSSNNNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTCCGATCAAATTCCTGGCGGCAGCGGCCCTGTACTTGCCACTGATCATCGCGATCGCGGCGGCGCTGGAGGTCCGGCCCTCGGAGCACGGGCTCGAGTTTCA
GAGCCCTCCGCCGGCGGGAGGCCAATCGTCGCCGGAGATGCGATCGTTCTTCGGAGGAACGTCGTCGCCGACGCCGGAAGTGGAATTGCCGCTGCCGAAGACGATGGATT
CGGGCGAGGCGCCGGGATGGTGGACCCACCGCGACGGCGGAAATAAGCGGCTGAGAAATGCATTGTTGGTGGCGACGGCGGTTTGTGGAATTACAGGTGTCGCTTTATTA
GTGGGTTCTACGTTATTCTACATTTATAAGGTCAAAAATCAAAGATCATTACCACTTTCTTCCAATAATAATAATCACAAATAA
mRNA sequenceShow/hide mRNA sequence
GATAGAAATGCGATGCTTGAGCTTCTGCACAAACTTTTTTCCAAAGTACCAAACAGACAGAGATAAAGGCTTTAACGAAAAAAGAGATTTCAAAGCGCTTTGGTTTGCTT
CCCCTTTACGCCAAAATCCAATCTTCCTTCCATCATTGTTCTTAACAACTCTCAATCCCTAATTCCCAACTTTCTTTTATAATCCTCCCAACACAATCCACCACCACAAG
ATCCAACCAAATCGATGAAGATTCCGATCAAATTCCTGGCGGCAGCGGCCCTGTACTTGCCACTGATCATCGCGATCGCGGCGGCGCTGGAGGTCCGGCCCTCGGAGCAC
GGGCTCGAGTTTCAGAGCCCTCCGCCGGCGGGAGGCCAATCGTCGCCGGAGATGCGATCGTTCTTCGGAGGAACGTCGTCGCCGACGCCGGAAGTGGAATTGCCGCTGCC
GAAGACGATGGATTCGGGCGAGGCGCCGGGATGGTGGACCCACCGCGACGGCGGAAATAAGCGGCTGAGAAATGCATTGTTGGTGGCGACGGCGGTTTGTGGAATTACAG
GTGTCGCTTTATTAGTGGGTTCTACGTTATTCTACATTTATAAGGTCAAAAATCAAAGATCATTACCACTTTCTTCCAATAATAATAATCACAAATAATAATTAAAAAAA
AACTACATTATCTGTATGGTTTACACCATGAATTTAGCTGTCTTAGCTTTTGAATTAGTTATATTTCCCACTTCCAATTTTTTCTTACTATATGAGATGTGATTTTAATT
ATTGAATTAGACGATTTTATTGCGATTTATTGCAAGTTGGGAATTTGTATTCTCATGTACCAATAATTTGTTTATATCAATCAAAAAACAGAAGAAATTCGTTGAAGTTT
GGATTGTGGTATTTCTTTGTATTTTGCCCATTCTGTAAGAAAATAATATTCTCGTCTTATATTTATGAAAGCGTGTGGGGCCCGGAG
Protein sequenceShow/hide protein sequence
MKIPIKFLAAAALYLPLIIAIAAALEVRPSEHGLEFQSPPPAGGQSSPEMRSFFGGTSSPTPEVELPLPKTMDSGEAPGWWTHRDGGNKRLRNALLVATAVCGITGVALL
VGSTLFYIYKVKNQRSLPLSSNNNNHK