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Sed0018144 (gene) of Chayote v1 genome

Gene IDSed0018144
OrganismSechium edule (Chayote v1)
DescriptionNACHT, LRR and PYD domains-containing protein 5 isoform X3
Genome locationLG07:1616035..1618401
RNA-Seq ExpressionSed0018144
SyntenySed0018144
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07805.1 NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa]1.7e-0687.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYI
        SCLDEAAEIASLP FSKCIGEIEMSGDND ++
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYI

XP_004139728.1 protein NLRC3 isoform X2 [Cucumis sativus]8.1e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

XP_031744906.1 NACHT, LRR and PYD domains-containing protein 5 isoform X1 [Cucumis sativus]8.1e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

TrEMBL top hitse value%identityAlignment
A0A0A0K4G5 Uncharacterized protein3.9e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

A0A1S3CFT7 uncharacterized protein LOC103500467 isoform X18.7e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

A0A1S3CFV1 uncharacterized protein LOC103500467 isoform X38.7e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

A0A5A7U5S5 Protein NLRC3 isoform X18.7e-0467.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF
        SCLDEAAEIASLP FSKCIGEIEMS     YI   +   F
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADF

A0A5D3C8J8 NACHT, LRR and PYD domains-containing protein 5 isoform X38.4e-0787.5Show/hide
Query:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYI
        SCLDEAAEIASLP FSKCIGEIEMSGDND ++
Subjt:  SCLDEAAEIASLPYFSKCIGEIEMSGDNDAYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTATTTTTTTGCATAACAGTTGCCTCGATGAAGCAGCCGAAATAGCCTCACTACCATACTTTTCTAAATGTATCGGAGAAATAGAGATGTCAGGTGAT
AATGATGCATATATTAAGGAGCTGCAAGGTGCAGACTTTGGTATTAAGGTGGATCAGATTCCAGGAGCAAGTCAATGGATTATGCAAACTCCTAAACCAGAGCAG
AGAAACTTTAACATCAATCGAACTCATTCATTGCAAGCTATCTTCAACTTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTATTTTTTTGCATAACAGTTGCCTCGATGAAGCAGCCGAAATAGCCTCACTACCATACTTTTCTAAATGTATCGGAGAAATAGAGATGTCAGGTGAT
AATGATGCATATATTAAGGAGCTGCAAGGTGCAGACTTTGGTATTAAGGTGGATCAGATTCCAGGAGCAAGTCAATGGATTATGCAAACTCCTAAACCAGAGCAG
AGAAACTTTAACATCAATCGAACTCATTCATTGCAAGCTATCTTCAACTTCTATTAA
Protein sequenceShow/hide protein sequence
MFCIFLHNSCLDEAAEIASLPYFSKCIGEIEMSGDNDAYIKELQGADFGIKVDQIPGASQWIMQTPKPEQRNFNINRTHSLQAIFNFY