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Sed0018150 (gene) of Chayote v1 genome

Gene IDSed0018150
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG12:29880827..29881069
RNA-Seq ExpressionSed0018150
SyntenySed0018150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44710.1 TPA_asm: hypothetical protein HUJ06_002940 [Nelumbo nucifera]1.1e-0750Show/hide
Query:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKS----AAAAHLSPKSVES
        ++++ S+ K GG+G+ +SG   S    G CLCSPTTH GSFRC+ HRS S  WT  SKS    ++   +SPKSVES
Subjt:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKS----AAAAHLSPKSVES

KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]5.1e-2171.26Show/hide
Query:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA
        M +Q KMS+SIPS AKS GDGDG   AGHSCS K  CLCSPTTHPGSFRCRLHRSNSLPW+  SKS AA       + LSPKSVESA
Subjt:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA

KAE7998752.1 hypothetical protein FH972_003263 [Carpinus fangiana]1.4e-0751.95Show/hide
Query:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-----AHLSPKSVES
        S+++ ++ KSG +   E   G S S KG CLCSPTTH GSFRCR HRS+S  W   SKS  A     A +SPKS+ES
Subjt:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-----AHLSPKSVES

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]1.5e-2071.08Show/hide
Query:  AKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA
        AKMS+ IPS AKS G+GDG  G  HSCS KG CLCSPTTHPGSFRCRLHRSNSLPW+  SKS AA       + LSPKSVESA
Subjt:  AKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2070.11Show/hide
Query:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSK-----SAAAAH---LSPKSVES
        M+A  K+ +SIPS+AKS GDGDG   A H+CS KG CLCSPTTHPGSFRCRLHRSNSLPWT HSK     SA A+H   LSPKSVES
Subjt:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSK-----SAAAAH---LSPKSVES

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein6.4e-2270.11Show/hide
Query:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA
        M +QAKMS+ IPS AKS G+GDG  G  HSCS KG CLCSPTTHPGSFRCRLHRSNSLPW+  SKS AA       + LSPKSVESA
Subjt:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA

A0A2P2P8K4 Uncharacterized protein1.4e-0853.95Show/hide
Query:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSA----AAAHLSPKSVES
        S+S+ + +  GG+G+G S A  S S KG CLCSPTTH GSFRC+ HRS S  WT  SKS         LSPKSV+S
Subjt:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSA----AAAHLSPKSVES

A0A5D3BJV5 Uncharacterized protein2.4e-2171.26Show/hide
Query:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA
        M +Q KMS+SIPS AKS GDGDG   AGHSCS K  CLCSPTTHPGSFRCRLHRSNSLPW+  SKS AA       + LSPKSVESA
Subjt:  MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-------AHLSPKSVESA

A0A5N6QHE2 Uncharacterized protein6.9e-0851.95Show/hide
Query:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-----AHLSPKSVES
        S+++ ++ KSG +   E   G S S KG CLCSPTTH GSFRCR HRS+S  W   SKS  A     A +SPKS+ES
Subjt:  SMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAA-----AHLSPKSVES

A0A6A1UK22 Uncharacterized protein6.9e-0856.58Show/hide
Query:  MSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSK----SAAAAHLSPKSVESA
        +S+ +  KS   G GE+  G S S KG CLCSPTTH GSFRCRLHRS+S  W   SK    S++ A LSPKSVES+
Subjt:  MSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSK----SAAAAHLSPKSVESA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein3.7e-0672Show/hide
Query:  KGLCLCSPTTHPGSFRCRLHRSNSL
        K +C+CSPTTHPGSF+C+LHR+ SL
Subjt:  KGLCLCSPTTHPGSFRCRLHRSNSL

AT1G67910.1 unknown protein2.0e-0758.14Show/hide
Query:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKSVES
        CLCSPTTHPGSFRCR+HRS SL  T   ++A+     PK  +S
Subjt:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKSVES

AT1G67910.2 unknown protein2.0e-0758.14Show/hide
Query:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKSVES
        CLCSPTTHPGSFRCR+HRS SL  T   ++A+     PK  +S
Subjt:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKSVES

AT3G13227.1 serine-rich protein-related8.9e-0854.35Show/hide
Query:  PSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNS
        P   + GG G G  G   S S +  CLC+PTTHPGSFRCR HR N+
Subjt:  PSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNS

AT5G55980.1 serine-rich protein-related5.4e-0560Show/hide
Query:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKS
        CLCSPTTH GSFRCR HR +SL       S  A  LS KS
Subjt:  CLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCAAGCCAAAATGAGTATGAGCATCCCATCGGCCGCAAAAAGCGGCGGCGACGGCGACGGCGAATCGGGGGCCGGTCACTCATGTTCATGGAAAGGCCTATG
CCTCTGCTCCCCCACCACTCATCCCGGTTCCTTCCGGTGTCGCCTTCACCGCTCCAATTCCCTGCCATGGACCACCCACTCCAAGTCCGCCGCCGCCGCCCATCTTTCCC
CCAAGTCTGTTGAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCAAGCCAAAATGAGTATGAGCATCCCATCGGCCGCAAAAAGCGGCGGCGACGGCGACGGCGAATCGGGGGCCGGTCACTCATGTTCATGGAAAGGCCTATG
CCTCTGCTCCCCCACCACTCATCCCGGTTCCTTCCGGTGTCGCCTTCACCGCTCCAATTCCCTGCCATGGACCACCCACTCCAAGTCCGCCGCCGCCGCCCATCTTTCCC
CCAAGTCTGTTGAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MAAQAKMSMSIPSAAKSGGDGDGESGAGHSCSWKGLCLCSPTTHPGSFRCRLHRSNSLPWTTHSKSAAAAHLSPKSVESA