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Sed0018176 (gene) of Chayote v1 genome

Gene IDSed0018176
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:48305884..48306346
RNA-Seq ExpressionSed0018176
SyntenySed0018176
Gene Ontology termsGO:0006897 - endocytosis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582136.1 hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2877.53Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPM-GGRD-EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRSKS+KCFSIC+ILKSCCFPM GGRD ++ Y   DESAEIRRRMWPSD+D   RWVAEPGIDRKAS FI RFYESRVSD +RQT +
Subjt:  MGGRSKSMKCFSICNILKSCCFPM-GGRD-EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
KAG6597601.1 hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2782.05Show/hide
Query:  MKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MKCFSIC+I KSCCF  GGRDE GY   DES EIRRRMWPSDED RWVAEPGIDRKASAFI RFY++RVSDP+RQTLS
Subjt:  MKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
KAG7029045.1 hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3183.53Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRSKSMKCFSIC+I KSCCF  GGRDE GY   DES EIRRRMWPSDED RWVAEPGIDRKASAFI RFY++RVSDP+RQTLS
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
XP_022138231.1 uncharacterized protein LOC111009454 [Momordica charantia]2.9e-3081.4Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGR KS KCFSIC+ILKSCCFPMGGR  +     DESAEIRRRMWPSDEDR RWVAEPGIDRKASAFI RFYE+RVSDPQRQT +
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
XP_022935735.1 uncharacterized protein LOC111442555 [Cucurbita moschata]4.5e-3182.35Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRSKSMKCFSIC+I KSCCF  GGRDE GY   DES EIRRRMWPSDED RWVAEPGIDRKASAFI RFY++RVSDP+RQTL+
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
TrEMBL top hitse value%identityAlignment
A0A0A0LAW1 Uncharacterized protein1.8e-1775Show/hide
Query:  MGGR----DEQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGR    D +G+   D+S EIRRRMWPSDEDR  RWVAEPGIDRKASAFI RFYE+RVSDP+RQTLS
Subjt:  MGGR----DEQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
A0A5A7U8R2 Uncharacterized protein8.9e-1774.63Show/hide
Query:  MGGRD---EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRD   + G    D+S E+RRRMWPSDEDR  RWVAEPGIDRKASAFI RFYE+RVSDP+RQTLS
Subjt:  MGGRD---EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
A0A6J1C955 uncharacterized protein LOC1110094541.4e-3081.4Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGR KS KCFSIC+ILKSCCFPMGGR  +     DESAEIRRRMWPSDEDR RWVAEPGIDRKASAFI RFYE+RVSDPQRQT +
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
A0A6J1FBH6 uncharacterized protein LOC1114425552.2e-3182.35Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRSKSMKCFSIC+I KSCCF  GGRDE GY   DES EIRRRMWPSDED RWVAEPGIDRKASAFI RFY++RVSDP+RQTL+
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
E5GC50 Uncharacterized protein8.9e-1774.63Show/hide
Query:  MGGRD---EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGGRD   + G    D+S E+RRRMWPSDEDR  RWVAEPGIDRKASAFI RFYE+RVSDP+RQTLS
Subjt:  MGGRD---EQGYNNLDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein1.2e-0532.93Show/hide
Query:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RW-VAEPGIDRKASAFIQRFYESRVSDPQ
        MGG  +  K  S  +++KS  F    +++  +N  +    +R R+  +D+D   W +AEP IDR+A+AFI +F+E+ + D +
Subjt:  MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDR-RW-VAEPGIDRKASAFIQRFYESRVSDPQ
AT3G05858.1 unknown protein3.2e-1147.83Show/hide
Query:  MGG--RSKSMKCFSICNILKS----CCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
        MGG  RS S K FS+ +  K+         G  D+ GY          R+   SDED+R WVAEPGIDRKASAFI +F+ +RVS+ +RQTLS
Subjt:  MGG--RSKSMKCFSICNILKS----CCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIQRFYESRVSDPQRQTLS
AT5G26620.1 unknown protein3.2e-1172.09Show/hide
Query:  RRMWPSDEDRR-WVAEPGIDRKASAFIQRFYESRVSDPQRQTL
        R+ W SDED+R WVAEPGIDRKASAFI +F+ SRVS+ +RQTL
Subjt:  RRMWPSDEDRR-WVAEPGIDRKASAFIQRFYESRVSDPQRQTL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAAGATCAAAGTCAATGAAGTGTTTTTCCATTTGCAACATATTGAAAAGTTGCTGTTTTCCAATGGGAGGAAGGGATGAACAAGGCTACAATAATTTGGATGA
AAGTGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATCGAAGATGGGTTGCCGAGCCCGGAATTGATCGCAAAGCTTCTGCTTTCATTCAAAGATTTTACGAGT
CTCGGGTTTCGGATCCTCAACGCCAAACCCTTTCTTCGGTTTGA
mRNA sequenceShow/hide mRNA sequence
TACACAGCCTCCAATAATCCCACTCTCTTTTAGCAGCTTTAGAGGCCAAAAAAAAAAAAAGAAAAGAGAGAGCATAATTGGGAGTGATTAATTAGAGACAAAGTGGGGTT
TAATTAGTTCAAATAAGTTTATTTATGGGTGGAAGATCAAAGTCAATGAAGTGTTTTTCCATTTGCAACATATTGAAAAGTTGCTGTTTTCCAATGGGAGGAAGGGATGA
ACAAGGCTACAATAATTTGGATGAAAGTGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATCGAAGATGGGTTGCCGAGCCCGGAATTGATCGCAAAGCTTCTG
CTTTCATTCAAAGATTTTACGAGTCTCGGGTTTCGGATCCTCAACGCCAAACCCTTTCTTCGGTTTGAGTAGTACTCCTTTAATCCTTTTCGTGGTTCGGTCGAGTTGAG
TTGAGTTGGGTTTTGGCAGAGCT
Protein sequenceShow/hide protein sequence
MGGRSKSMKCFSICNILKSCCFPMGGRDEQGYNNLDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIQRFYESRVSDPQRQTLSSV