CuGenDBv2

Gene ID	Sed0018191
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Genome location	LG01:21710980..21711980
RNA-Seq Expression	Sed0018191
Synteny	Sed0018191
Gene Ontology terms	GO:0010468 - regulation of gene expression (biological process)
InterPro domains	IPR004883 - Lateral organ boundaries, LOB

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7024296.1 LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-70

71.43

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSC+GCRVLRKGC+E CVLRSSL WIHSPEAQ NATLFLAKFFGRSDLLSF+++VP+HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+ AAET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVW--THQNL------PADH----------GRGKEQPLENQRSFDSEESVMTSFGSGDHGVGDRKLLN
        VLSGGVL PIPGI++SGN + NV+D+SL+ N DVW  T QNL      P+D           GR K   LEN+RS DSE+S+MTSFGSGD     RKLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVW--THQNL------PADH----------GRGKEQPLENQRSFDSEESVMTSFGSGDHGVGDRKLLN

Query:  LFI
        LFI
Subjt:  LFI

XP_004141401.1 LOB domain-containing protein 39 [Cucumis sativus]

3.6e-70

70.24

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRSSL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLS+GNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT---------HQNLPADH--------GRGK-EQPLENQRSFDSEESVMTSFGSGDHG--VGDRKL
        +L+GGVL PIPGI+IS N + N++D+SL+FN DVWT         + + P+D         GR K   PLEN+RS DSEESVMTSFGSGD G    + KL
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT---------HQNLPADH--------GRGK-EQPLENQRSFDSEESVMTSFGSGDHG--VGDRKL

Query:  LNLFI
        LNLF+
Subjt:  LNLFI

XP_008452637.1 PREDICTED: LOB domain-containing protein 39-like [Cucumis melo]

2.9e-72

71.43

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRSSL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN
        +L+GGVL PIPGI+ISGN + N++D+S +FNNDVWT        + + P+D          R K+ PLEN+RS DSEESVMTSFGSGD G    + KLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN

Query:  LFI
        LF+
Subjt:  LFI

XP_022137491.1 LOB domain-containing protein 39-like [Momordica charantia]

3.8e-72

72.41

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRS L WI SPE+QGNATLFLAKFFGRSDLLSF+S+VP+HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAAET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQNLP------------ADHGRGKEQ--PLENQRSFDSEESVMTSFGSGDHGVGD----RKLLN
        VL GGVL PIPGI +SGN + +V+++S+SF+ DVWT QNL             +D G GK     +EN+RS DSEESVMTSFGSGD G GD    RKLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQNLP------------ADHGRGKEQ--PLENQRSFDSEESVMTSFGSGDHGVGD----RKLLN

Query:  LFI
        LFI
Subjt:  LFI

XP_038899091.1 LOB domain-containing protein 39-like [Benincasa hispida]

2.7e-73

72.2

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLR SL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGVGDR----KL
        VL+GGVL PIPG +ISGNL+ N++++ L+FN DVWT        + + P+D         GRGK  PLEN+RS DSEESVMTSFGSGD  VGDR    KL
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGVGDR----KL

Query:  LNLFI
        LNLF+
Subjt:  LNLFI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3S5 LOB domain-containing protein

1.7e-70

70.24

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRSSL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLS+GNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT---------HQNLPADH--------GRGK-EQPLENQRSFDSEESVMTSFGSGDHG--VGDRKL
        +L+GGVL PIPGI+IS N + N++D+SL+FN DVWT         + + P+D         GR K   PLEN+RS DSEESVMTSFGSGD G    + KL
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT---------HQNLPADH--------GRGK-EQPLENQRSFDSEESVMTSFGSGDHG--VGDRKL

Query:  LNLFI
        LNLF+
Subjt:  LNLFI

A0A1S3BVG9 LOB domain-containing protein 39-like

1.4e-72

71.43

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRSSL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN
        +L+GGVL PIPGI+ISGN + N++D+S +FNNDVWT        + + P+D          R K+ PLEN+RS DSEESVMTSFGSGD G    + KLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN

Query:  LFI
        LF+
Subjt:  LFI

A0A5A7VDI5 LOB domain-containing protein 39-like

1.4e-72

71.43

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRSSL WI SPEAQGNATLFLAKFFGRSDLLSF+S+VP HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAA+T
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN
        +L+GGVL PIPGI+ISGN + N++D+S +FNNDVWT        + + P+D          R K+ PLEN+RS DSEESVMTSFGSGD G    + KLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWT--------HQNLPADH--------GRGKEQPLENQRSFDSEESVMTSFGSGDHGV--GDRKLLN

Query:  LFI
        LF+
Subjt:  LFI

A0A6J1C6S3 LOB domain-containing protein 39-like

1.9e-72

72.41

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE CVLRS L WI SPE+QGNATLFLAKFFGRSDLLSF+S+VP+HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+AAAET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQNLP------------ADHGRGKEQ--PLENQRSFDSEESVMTSFGSGDHGVGD----RKLLN
        VL GGVL PIPGI +SGN + +V+++S+SF+ DVWT QNL             +D G GK     +EN+RS DSEESVMTSFGSGD G GD    RKLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQNLP------------ADHGRGKEQ--PLENQRSFDSEESVMTSFGSGDHGVGD----RKLLN

Query:  LFI
        LFI
Subjt:  LFI

A0A6J1FEE1 LOB domain-containing protein 38-like

5.6e-69

70.44

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSC+GCRVLRKGC+E CVLRSSL WIHSPEAQ NATLFLAKFFGRSDLLSF+++VP+HQR ALFQSLLFEACGRTVNPVSGAVGLLSSGNWH C+ AAET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVW--THQNL------PADHG----------RGKEQPLENQRSFDSEESVMTSFGSGDHGVGDRKLLN
        VLSGGVL PIPGI++SGN + NV+D+SL+ N DVW  T QNL      P+D            R K    EN+RS DSE+S+MTSFGSGD     RKLLN
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVW--THQNL------PADHG----------RGKEQPLENQRSFDSEESVMTSFGSGDHGVGDRKLLN

Query:  LFI
        LFI
Subjt:  LFI

SwissProt top hits

e value

%identity

Alignment

Q9FN11 LOB domain-containing protein 37

8.6e-43

67.52

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C+LR  +QWI + +AQG+AT+F+AKFFGR+ L+SF+S+VP+ QR ALFQSLL+EACGRTVNPV+GA+G+L +GNW+ C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISG
        VL GG L PIP +   G
Subjt:  VLSGGVLWPIPGIQISG

Q9M886 LOB domain-containing protein 41

3.0e-35

64.42

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSEDC +R  L WI SPEAQ NAT+FLAKF+GR+ L++ +++ PNH R  +F+SLL EACGR VNP+ G+VGLL SGNW  C+ A E 
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSG
        V+ G
Subjt:  VLSG

Q9SN23 LOB domain-containing protein 38

6.0e-44

69.17

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C+LR  +QWI SPEAQG+AT+F+AKFFGR+ L+SF+S+VP  Q  ALFQSLL+EACGRTVNPV+GAVGLL +GNW+ C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLS
        VL GG L PIP +   G  +
Subjt:  VLSGGVLWPIPGIQISGNLS

Q9SZE8 LOB domain-containing protein 39

1.9e-45

63.77

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE C+LR  LQWI S E+QG+AT+F+AKFFGR+ L+SF+SSVP  QR ALFQSLLFEACGRTVNPV+GAVG+L + NWH C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQ
        VL GG L PI  +  S +L ++ +++S  ++ DV  +Q
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQ

Q9ZW96 LOB domain-containing protein 40

4.2e-37

63.64

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C +R  LQWI S E+Q NAT+FLAKF+GR+ L++ L++ P+H R A+F+SLL+EACGR VNP+ G+VGLL SGNWH C+AA E 
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPI
        V+ G  + PI
Subjt:  VLSGGVLWPI

Arabidopsis top hits

e value

%identity

Alignment

AT1G67100.1 LOB domain-containing protein 40

3.0e-38

63.64

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C +R  LQWI S E+Q NAT+FLAKF+GR+ L++ L++ P+H R A+F+SLL+EACGR VNP+ G+VGLL SGNWH C+AA E 
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPI
        V+ G  + PI
Subjt:  VLSGGVLWPI

AT3G02550.1 LOB domain-containing protein 41

2.1e-36

64.42

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSEDC +R  L WI SPEAQ NAT+FLAKF+GR+ L++ +++ PNH R  +F+SLL EACGR VNP+ G+VGLL SGNW  C+ A E 
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSG
        V+ G
Subjt:  VLSG

AT3G49940.1 LOB domain-containing protein 38

4.3e-45

69.17

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C+LR  +QWI SPEAQG+AT+F+AKFFGR+ L+SF+S+VP  Q  ALFQSLL+EACGRTVNPV+GAVGLL +GNW+ C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLS
        VL GG L PIP +   G  +
Subjt:  VLSGGVLWPIPGIQISGNLS

AT4G37540.1 LOB domain-containing protein 39

1.3e-46

63.77

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE C+LR  LQWI S E+QG+AT+F+AKFFGR+ L+SF+SSVP  QR ALFQSLLFEACGRTVNPV+GAVG+L + NWH C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQ
        VL GG L PI  +  S +L ++ +++S  ++ DV  +Q
Subjt:  VLSGGVLWPIPGIQISGNLSVNVEDASLSFNNDVWTHQ

AT5G67420.1 LOB domain-containing protein 37

6.1e-44

67.52

Show/hide

Query:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET
        MSCNGCRVLRKGCSE+C+LR  +QWI + +AQG+AT+F+AKFFGR+ L+SF+S+VP+ QR ALFQSLL+EACGRTVNPV+GA+G+L +GNW+ C+AA ET
Subjt:  MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAET

Query:  VLSGGVLWPIPGIQISG
        VL GG L PIP +   G
Subjt:  VLSGGVLWPIPGIQISG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTTGCAATGGTTGCAGGGTTCTTCGAAAGGGTTGCAGCGAAGACTGTGTATTAAGGTCAAGTCTCCAATGGATTCACTCCCCGGAAGCTCAAGGCAACGCCACTTT
ATTTCTCGCTAAGTTCTTCGGCCGGAGTGATCTCTTGTCCTTCCTCTCCTCCGTTCCTAATCATCAAAGACATGCTCTGTTTCAGTCTCTGTTATTTGAAGCCTGTGGCC
GCACGGTGAACCCGGTGAGCGGCGCCGTTGGGCTGTTGTCGAGTGGGAACTGGCACGCGTGTCGGGCGGCGGCGGAGACGGTTCTCAGCGGCGGAGTTCTCTGGCCGATT
CCCGGAATTCAAATTTCTGGGAATCTCTCTGTTAACGTCGAGGATGCTTCTCTTAGTTTCAATAATGATGTTTGGACCCATCAGAATCTTCCGGCCGATCACGGAAGAGG
GAAGGAACAGCCGTTGGAGAATCAGCGGTCGTTTGATTCAGAGGAATCGGTGATGACGAGCTTTGGAAGCGGCGATCATGGCGTCGGCGACCGGAAGCTTTTGAACTTGT
TCATCTGA

mRNA sequence

Show/hide mRNA sequence

TTATTATTAACTTTTACTACCCATTCAAATTCGTCAATCACTCTCTCTTTCTCTTTTCTCCATTGCTATTTCTTCAATCTAAAGTAACCTCTGTTCTTCATTATTTCAAA
CCGATCAAAACAGAGCGCTTTGAAATTTGGGGATTTTGTGTTTGTTTGTAAACCTCACAATCGGAGAAAATGAGTTGCAATGGTTGCAGGGTTCTTCGAAAGGGTTGCAG
CGAAGACTGTGTATTAAGGTCAAGTCTCCAATGGATTCACTCCCCGGAAGCTCAAGGCAACGCCACTTTATTTCTCGCTAAGTTCTTCGGCCGGAGTGATCTCTTGTCCT
TCCTCTCCTCCGTTCCTAATCATCAAAGACATGCTCTGTTTCAGTCTCTGTTATTTGAAGCCTGTGGCCGCACGGTGAACCCGGTGAGCGGCGCCGTTGGGCTGTTGTCG
AGTGGGAACTGGCACGCGTGTCGGGCGGCGGCGGAGACGGTTCTCAGCGGCGGAGTTCTCTGGCCGATTCCCGGAATTCAAATTTCTGGGAATCTCTCTGTTAACGTCGA
GGATGCTTCTCTTAGTTTCAATAATGATGTTTGGACCCATCAGAATCTTCCGGCCGATCACGGAAGAGGGAAGGAACAGCCGTTGGAGAATCAGCGGTCGTTTGATTCAG
AGGAATCGGTGATGACGAGCTTTGGAAGCGGCGATCATGGCGTCGGCGACCGGAAGCTTTTGAACTTGTTCATCTGAAAAACAAATAAGAAAACAGAGTTATATATGTTG
GAATTTTGGTTTTTGAGTTTAGTATTGGAAATGGCGACGTAGAAGTACCGAAAGTGAATAATCCAATGAGATTTGATAAATAGTTCGTCGGAACAGAACTTTCACAGTCT
ATTTTCTTTCGCCGGCG

Protein sequence

Show/hide protein sequence

MSCNGCRVLRKGCSEDCVLRSSLQWIHSPEAQGNATLFLAKFFGRSDLLSFLSSVPNHQRHALFQSLLFEACGRTVNPVSGAVGLLSSGNWHACRAAAETVLSGGVLWPI
PGIQISGNLSVNVEDASLSFNNDVWTHQNLPADHGRGKEQPLENQRSFDSEESVMTSFGSGDHGVGDRKLLNLFI

Sed0018191 (gene) of Chayote v1 genome