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Sed0018192 (gene) of Chayote v1 genome

Gene IDSed0018192
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:30888171..30888515
RNA-Seq ExpressionSed0018192
SyntenySed0018192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3968219.1 hypothetical protein CMV_007858 [Castanea mollissima]3.2e-0440Show/hide
Query:  SNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCG-------------------SRMVSNLSTG---WNLWKKIKQGFMGI
        S LYD  EL+AI   LNKA   S N  S  Y   L NSPFYRQ+L  IYKE+                     S   +N  +G     LWKK+KQG +  
Subjt:  SNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCG-------------------SRMVSNLSTG---WNLWKKIKQGFMGI

Query:  LPKKD
          KKD
Subjt:  LPKKD
KGN53885.1 hypothetical protein Csa_011823 [Cucumis sativus]1.1e-2052.8Show/hide
Query:  MEEQQSRSASKDHKSMSNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCGSR--------------------------MV
        MEEQQS +    H   SNLYDY+E +A+IGHLNKATHFSP+ L    SN LINSPFYRQRLN+IYK S GS                           M+
Subjt:  MEEQQSRSASKDHKSMSNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCGSR--------------------------MV

Query:  SNLSTGWNLWKKIKQGFMGILPKKD
        SN S    LWK+IK G MGILPKKD
Subjt:  SNLSTGWNLWKKIKQGFMGILPKKD
TrEMBL top hitse value%identityAlignment
A0A0A0KW83 Uncharacterized protein5.3e-2152.8Show/hide
Query:  MEEQQSRSASKDHKSMSNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCGSR--------------------------MV
        MEEQQS +    H   SNLYDY+E +A+IGHLNKATHFSP+ L    SN LINSPFYRQRLN+IYK S GS                           M+
Subjt:  MEEQQSRSASKDHKSMSNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCGSR--------------------------MV

Query:  SNLSTGWNLWKKIKQGFMGILPKKD
        SN S    LWK+IK G MGILPKKD
Subjt:  SNLSTGWNLWKKIKQGFMGILPKKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAACAATCAAGATCAGCTTCAAAGGATCATAAAAGCATGAGCAATCTTTATGATTATGAAGAACTTCAAGCCATAATCGGTCACCTCAACAAAGCCACTCA
TTTCAGTCCCAATGCTTTGAGTTCATCGTATTCGAATCGTTTGATAAATTCGCCATTTTATAGACAACGTTTGAACCAAATTTATAAAGAGAGTTGTGGTTCAAGAATGG
TTTCAAATCTATCAACTGGTTGGAACCTATGGAAGAAAATTAAGCAAGGCTTCATGGGAATTCTTCCTAAGAAAGATTGGGTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAACAATCAAGATCAGCTTCAAAGGATCATAAAAGCATGAGCAATCTTTATGATTATGAAGAACTTCAAGCCATAATCGGTCACCTCAACAAAGCCACTCA
TTTCAGTCCCAATGCTTTGAGTTCATCGTATTCGAATCGTTTGATAAATTCGCCATTTTATAGACAACGTTTGAACCAAATTTATAAAGAGAGTTGTGGTTCAAGAATGG
TTTCAAATCTATCAACTGGTTGGAACCTATGGAAGAAAATTAAGCAAGGCTTCATGGGAATTCTTCCTAAGAAAGATTGGGTCAATTAA
Protein sequenceShow/hide protein sequence
MEEQQSRSASKDHKSMSNLYDYEELQAIIGHLNKATHFSPNALSSSYSNRLINSPFYRQRLNQIYKESCGSRMVSNLSTGWNLWKKIKQGFMGILPKKDWVN