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Sed0018197 (gene) of Chayote v1 genome

Gene IDSed0018197
OrganismSechium edule (Chayote v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationLG08:5564986..5566617
RNA-Seq ExpressionSed0018197
SyntenySed0018197
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587944.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6388.89Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL IPTHK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

XP_008463373.1 PREDICTED: uncharacterized protein LOC103501543 [Cucumis melo]2.3e-5378.23Show/hide
Query:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI
        MGKL KK+ K  DCFS+S +SCSS SCFCINS  IED++DE  DK PLI   +K  +Q LTLKDVVNGNQTLAFQLKPKMVTL+VSMHC+GCARKVEKHI
Subjt:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI

Query:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        SKMEGVSSYTIDLE KMVIIIGDILPFEVV+S+SKVKNA+LWQS +A
Subjt:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

XP_022933309.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita moschata]2.1e-6288.19Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL I THK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

XP_022973748.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita maxima]2.1e-6288.19Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL I THK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

XP_023531514.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita pepo subsp. pepo]9.5e-6387.5Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL IP+HK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGD+LPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

TrEMBL top hitse value%identityAlignment
A0A0A0LZH7 HMA domain-containing protein5.6e-5377.55Show/hide
Query:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI
        MGKL KK+ K  DCFS+S +SCSS SCFCINS  IED++DE  DK PLI   ++  +Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHC+GCARKVEKHI
Subjt:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI

Query:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        SKMEGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS +A
Subjt:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

A0A1S3CJJ6 uncharacterized protein LOC1035015431.1e-5378.23Show/hide
Query:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI
        MGKL KK+ K  DCFS+S +SCSS SCFCINS  IED++DE  DK PLI   +K  +Q LTLKDVVNGNQTLAFQLKPKMVTL+VSMHC+GCARKVEKHI
Subjt:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINS--IEDQDDE-LDKLPLIIPTHK--HQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHI

Query:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        SKMEGVSSYTIDLE KMVIIIGDILPFEVV+S+SKVKNA+LWQS +A
Subjt:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

A0A6J1CUT7 protein SODIUM POTASSIUM ROOT DEFECTIVE 12.1e-5280.14Show/hide
Query:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINSIED-QDDELDKLPLI-IPTH--KHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHIS
        MGK  KKI+  LDCFS S SSCS  SCFCINS+ED Q+DE DK PL+ +PTH  K Q L LKD+VNGNQTLAFQLKPKMV L+VSMHCRGCARKVEKHIS
Subjt:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINSIED-QDDELDKLPLI-IPTH--KHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHIS

Query:  KMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        KMEGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  KMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

A0A6J1EZE4 heavy metal-associated isoprenylated plant protein 45-like1.0e-6288.19Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL I THK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

A0A6J1IE28 heavy metal-associated isoprenylated plant protein 45-like1.0e-6288.19Show/hide
Query:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM
        MGKLHKKISKALDCFS S  PSSCSSGSCFCINS+E+Q+DE DKLPL I THK Q  TLKDVVNGNQTLAFQLKPKMVTL+VSMHCRGCARKVEKHISKM
Subjt:  MGKLHKKISKALDCFSFS--PSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKM

Query:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA
        EGVSSYTIDLETKMVIIIGDILPFEVV+S+SKVKNA+LWQS LA
Subjt:  EGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQSELA

SwissProt top hitse value%identityAlignment
Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 23.1e-1657.81Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V LKVS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E++DSISKVKNA+ W
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW

Q84J88 Heavy metal-associated isoprenylated plant protein 361.2e-0740Show/hide
Query:  LKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKV-KNAELWQSEL
        L+VS+HC GC RK++K +SK++GV +  ID++ + V +IG++ P  ++  I K  ++AELW + +
Subjt:  LKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKV-KNAELWQSEL

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 12.6e-1556.25Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V L+VS+HC+GCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ SISKVKNA+ W
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 38.4e-1454.55Show/hide
Query:  KMVTLKVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V L+VS+  HCRGC  KV+KH+SKM+GV+S+ ID  +K V + GDI P EV+  +SKVKNA+ W
Subjt:  KMVTLKVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW

Q9C7J6 Heavy metal-associated isoprenylated plant protein 351.7e-0646.03Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKV-KNAE
        K  TLKVS+HC GC RKV+K ++ +EGV    ID++   V +IG I P  ++  ++K  KNAE
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKV-KNAE

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein4.4e-1863.64Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQS
        ++V L+VS+HC+GC  KV KHISKMEGV+SYTIDL TK V ++G I P  +V+SISKVK A+LW S
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQS

AT2G37390.1 Chloroplast-targeted copper chaperone protein2.2e-1757.81Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V LKVS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E++DSISKVKNA+ W
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW

AT2G37390.2 Chloroplast-targeted copper chaperone protein2.2e-1757.81Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V LKVS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E++DSISKVKNA+ W
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein2.0e-3453.85Show/hide
Query:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINSIEDQDDELDKLPLI-IPTHKH-QFLTLKDVV--NGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHIS
        MGKL +KI +  DC     + C   SCFC+N++ D+++E +K PLI   T K  + + LKDVV  +  QTLAF LKPK+V LKVSMHC GCA+KVEKHIS
Subjt:  MGKLHKKISKALDCFSFSPSSCSSGSCFCINSIEDQDDELDKLPLI-IPTHKH-QFLTLKDVV--NGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHIS

Query:  KMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQS
        K++GV+ Y ++LE+K V++ G+ILP +V++SI KVKNA+LW S
Subjt:  KMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELWQS

AT5G02600.2 Heavy metal transport/detoxification superfamily protein1.9e-1656.25Show/hide
Query:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW
        ++V L+VS+HC+GCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ SISKVKNA+ W
Subjt:  KMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVDSISKVKNAELW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCTGCACAAGAAAATTTCAAAGGCTTTGGATTGTTTTAGTTTTAGTCCTTCATCTTGTAGCTCTGGCTCTTGTTTTTGCATAAACTCCATTGAAGATCAAGA
TGATGAGCTTGATAAACTGCCACTCATCATCCCCACTCACAAACATCAGTTCCTCACTTTGAAGGATGTTGTCAATGGAAACCAAACCTTGGCCTTTCAACTCAAGCCCA
AGATGGTGACTCTGAAAGTATCCATGCACTGTAGAGGATGTGCAAGAAAAGTAGAGAAACACATTTCAAAGATGGAAGGAGTGAGCTCTTACACAATAGACTTGGAGACT
AAGATGGTGATAATTATTGGAGATATTCTACCATTTGAAGTGGTGGACAGTATTTCTAAAGTAAAAAATGCAGAGCTCTGGCAATCTGAACTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
TGCATTTTCAAACTTCAAATATATTTTTGGGCACTTTACCTGCCCTCTCAATTTCCAAACCCAAAAAAAAGTGTCCTTTATTTACTTTACTCTGTCTCTTTCTTGCTTTT
ATTTATAGATATTCACTTGATTTTTGCAGTTGAGAAATTGGTGAGGCAGTTGTGGAATAATGGAGCTACTTAAAGGGTATTTGTAAAAATTACCCAAATTATTTTTGTAA
GTAAAATTTTGTTGAGCTGATTTCTGTGATGGGGAAGCTGCACAAGAAAATTTCAAAGGCTTTGGATTGTTTTAGTTTTAGTCCTTCATCTTGTAGCTCTGGCTCTTGTT
TTTGCATAAACTCCATTGAAGATCAAGATGATGAGCTTGATAAACTGCCACTCATCATCCCCACTCACAAACATCAGTTCCTCACTTTGAAGGATGTTGTCAATGGAAAC
CAAACCTTGGCCTTTCAACTCAAGCCCAAGATGGTGACTCTGAAAGTATCCATGCACTGTAGAGGATGTGCAAGAAAAGTAGAGAAACACATTTCAAAGATGGAAGGAGT
GAGCTCTTACACAATAGACTTGGAGACTAAGATGGTGATAATTATTGGAGATATTCTACCATTTGAAGTGGTGGACAGTATTTCTAAAGTAAAAAATGCAGAGCTCTGGC
AATCTGAACTAGCTTAGCTTGACTATATTTGCATATGAAGAAAACAATTATTAATTAATAAAAAAT
Protein sequenceShow/hide protein sequence
MGKLHKKISKALDCFSFSPSSCSSGSCFCINSIEDQDDELDKLPLIIPTHKHQFLTLKDVVNGNQTLAFQLKPKMVTLKVSMHCRGCARKVEKHISKMEGVSSYTIDLET
KMVIIIGDILPFEVVDSISKVKNAELWQSELA