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Sed0018210 (gene) of Chayote v1 genome

Gene IDSed0018210
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:4817871..4819440
RNA-Seq ExpressionSed0018210
SyntenySed0018210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605612.1 Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2080.26Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETL
        MKG+CTLLAS LAAST+AF    SSS+GDRDLAL PPS EGSVSDSRA R C SDSSS KEKFAPRFDGL+FIETL
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETL

KAG7035524.1 hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2280.25Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKG+CTLLAS LAAST+AF    SSS+GDRDLAL PPS EGSVSDS A R C SDSSS KEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

XP_008437456.1 PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]1.4e-2076.25Show/hide
Query:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AFSSS+   GDRDL L PPS +G V +S A R C +DSSS KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

XP_022929045.1 uncharacterized protein LOC111435756 [Cucurbita moschata]4.4e-2279.01Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AF    SSSN DRDLAL PPSREG VS+S + R C SDSS+ KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

XP_023520500.1 uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]9.8e-2277.78Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AF    SSSN DRDLAL PPSREG VS+S + R C SD+S+ KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

TrEMBL top hitse value%identityAlignment
A0A0A0KQK5 Uncharacterized protein6.4e-1971.43Show/hide
Query:  MKGSCTLLASALAASTVAFSSSN-------GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AFSSS+       GDRDL L   S +G VS+S A R C +DSSS KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAFSSSN-------GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

A0A1S3AU25 uncharacterized protein LOC1034828716.9e-2176.25Show/hide
Query:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AFSSS+   GDRDL L PPS +G V +S A R C +DSSS KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

A0A5A7TMP9 Uncharacterized protein4.9e-1968.89Show/hide
Query:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSRE----------GSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AFSSS+   GDRDL L PPS +          G VS+S A R C +DSSS KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAFSSSN---GDRDLALRPPSRE----------GSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

A0A6J1ET49 uncharacterized protein LOC1114357562.1e-2279.01Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AF    SSSN DRDLAL PPSREG VS+S + R C SDSS+ KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

A0A6J1HZR1 uncharacterized protein LOC1114691102.1e-2279.01Show/hide
Query:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLAS LAAST+AF    SSSN DRDLAL PPSREG VS+S + R C SDSS+ KEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAF----SSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein7.3e-0743.9Show/hide
Query:  MKGSCTLLAS-ALAASTVAFSSSNGDRDLALRPP----SREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MK +  + AS ++AAS  A S+ + +  ++   P    SR+ +    R K+    D     EKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLAS-ALAASTVAFSSSNGDRDLALRPP----SREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR

AT5G42110.1 unknown protein8.0e-0642.86Show/hide
Query:  MKGSCTLLASALAASTVAFSSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR
        MK S  ++AS +A ST A SSS      ++ PP          + +  +S  ++  + F PRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASALAASTVAFSSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGCCCTCGCCGCCTCCACCGTGGCTTTCTCCTCCTCTAATGGAGATCGCGACCTCGCTCTTCGTCCTCCTTCTCGAGAGGG
CTCCGTTTCGGATTCTCGTGCGAAGAGAGATTGCGATTCGGATTCTTCGTCCGTGAAGGAGAAATTCGCCCCGAGATTTGATGGATTGAGATTCATTGAGACTTTGGTAA
CTGCTCATAGATAA
mRNA sequenceShow/hide mRNA sequence
CCCCCCCCAAATTTCCTCGCCGCGCCGCGTTCATCATTTCCTCGCCGATCTTTTCTCCATCCCGTAAATCGGCCGAGATCCGGCGACCGCCGTCGGATTTCGTCACCGCT
CGCCGCGCCGCCCGCTCCGACGAATCATGAAAGGCTCCTGCACGTTGCTCGCCTCCGCCCTCGCCGCCTCCACCGTGGCTTTCTCCTCCTCTAATGGAGATCGCGACCTC
GCTCTTCGTCCTCCTTCTCGAGAGGGCTCCGTTTCGGATTCTCGTGCGAAGAGAGATTGCGATTCGGATTCTTCGTCCGTGAAGGAGAAATTCGCCCCGAGATTTGATGG
ATTGAGATTCATTGAGACTTTGGTAACTGCTCATAGATAATAAAACCCCGCTCCTCGTTTTCGTATCTATAATCTTCTGTTTTTTTGTGTTATCAACATTTTGCGGATCG
TAATCTGTTTCATATGATTGTTAGGAAGAGAAATTTTGTTTTTACATTATGTGAAGTGAGTGATTTATTTAGACTTCGATAAATTATGAAGAAAAAAAAAAAGGAAAATC
AAGAGATTTTGTGAGAGTTCCTCTTGTTTGTAATGGAGTTTGAATTGAAATTAAATGTTGAACGATTTGTTCTGTCTGTGTGAAAATTTGAAGAACATTCTTTTGAACCT
TTTGTTTTTGGAGTAAATCTTTGGATTGTGGAGTTTTATTAAGCATTTGGTGGGGTAAATCAAGAGGGTTTGCTCTCTTTAAGGTCTCAACTCGAAGGCCGGACTCTGGA
GATTAATTTTCGAGACGATCCTATATTTTTCCTTCGGCTCGGCTCGATATTTTACCTTGTTTGTTGGTGACTGGCCTAGTGATGGACATGATTTACACACCTAATATAGG
AAAGCATAAAGTTTTGAGTTCTCTGTTTTATTTATTATTATTTTTTTGAGTACATATTAGGACATGGAGAATGATATTGGAAGATGACGGACAAATACCGATTCTTAAAA
GCTAGTGTTGAACTGCTACACAGCTAAACAATGAAATCATTGTGCCGTTACCTTATTTCTCTGTTTTCAAAATTTAAGAAAAAAAGAAAAAGAAAAAAAAAGCACCAACT
GGTTTGATGAGCTCTTTATTTTTTCTTCTTAATTTATCTGTTTTCAAAAAAAGAAAGGTAAAGCATAAGCATGAGGAATCATCAAACCAGTTGGTGCCTTTTTTTAACAA
CTCATTGTTGGTGTGTGCATGATGTAGATGATGAGTTCACAAGTTCTTTTTGTTTTTTTTTTGGTTGTACAGACCATTTTGTAGTTTTTTTTTGTGATTGATATCTATGT
ACAATGAATCATTAGGAATTCATTTCAATTCAATGAAATGTTCGAATCCAATTACATATGTACTACACGTTCATGAAAAACGCTTGTAAATACTTTTTCTAATGAAAATG
GTTAGGGGAGAATGAACTCATTATCGATAATCATTCCTCA
Protein sequenceShow/hide protein sequence
MKGSCTLLASALAASTVAFSSSNGDRDLALRPPSREGSVSDSRAKRDCDSDSSSVKEKFAPRFDGLRFIETLVTAHR