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Sed0018216 (gene) of Chayote v1 genome

Gene IDSed0018216
OrganismSechium edule (Chayote v1)
DescriptionEthylene-responsive transcription factor
Genome locationLG08:36177158..36177564
RNA-Seq ExpressionSed0018216
SyntenySed0018216
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573284.1 Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3557.32Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVF------------------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C        T SP                    
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVF------------------

Query:  ---RDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
            D CN D        SPVL+DSSA  PP +      HV R LPFDLNEPPP+WL
Subjt:  ---RDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

KAG7012449.1 Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-3557.32Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVF------------------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C        T SP                    
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVF------------------

Query:  ---RDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
            D CN D        SPVL+DSSA  PP +      HV R LPFDLNEPPP+WL
Subjt:  ---RDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

XP_022954651.1 ethylene-responsive transcription factor 12-like [Cucurbita moschata]1.5e-3558.67Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADTPPLAKLF----------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C  L+ V R + +  +   A+L           
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADTPPLAKLF----------

Query:  -----------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
                   SPVL+DSSA  PP +      HV R LPFDLNEPPP+WL
Subjt:  -----------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

XP_022994485.1 ethylene-responsive transcription factor 12-like [Cucurbita maxima]1.2e-3558.17Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLS---PVFRDSCNADTPPLAKLF-------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C  L+   P    S  + +   A+L        
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLS---PVFRDSCNADTPPLAKLF-------

Query:  --------------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
                      SPVL+DSSA  PP S      HV R LPFDLNEPPP+WL
Subjt:  --------------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

XP_023542410.1 ethylene-responsive transcription factor 12-like [Cucurbita pepo subsp. pepo]1.5e-3557.23Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVFRDS---------------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C        T SP    S               
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCL-------TLSPVFRDS---------------

Query:  --------CNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
                CN D        SPVL+DSSA  PPP+      HV R LPFDLNEPPP+WL
Subjt:  --------CNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

TrEMBL top hitse value%identityAlignment
A0A0A0LSE4 AP2/ERF domain-containing protein2.6e-3355.83Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFP       LDLN+S           C+  + SP         
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------

Query:  -------VFRDSCNADTPPLAKLFSPVLLDSSA----TLPPPSANHVHRPLPFDLNEPPPLWL
               V  D CN +        SPVL+DSSA    T       HV R LPFDLNEPPP+WL
Subjt:  -------VFRDSCNADTPPLAKLFSPVLLDSSA----TLPPPSANHVHRPLPFDLNEPPPLWL

A0A1S3B631 ethylene-responsive transcription factor 122.2e-3254.66Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFP       LDLN+S           C+  + S          
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------

Query:  -----VFRDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
             V  D CN +        SPVL+D+SA+    ++     HV R LPFDLNEPPP+WL
Subjt:  -----VFRDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

A0A5D3DSV2 Ethylene-responsive transcription factor 122.2e-3254.66Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFP       LDLN+S           C+  + S          
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFP-------LDLNLS-----------CNCLTLSP---------

Query:  -----VFRDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
             V  D CN +        SPVL+D+SA+    ++     HV R LPFDLNEPPP+WL
Subjt:  -----VFRDSCNADTPPLAKLFSPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

A0A6J1GRG6 ethylene-responsive transcription factor 12-like7.3e-3658.67Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADTPPLAKLF----------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C  L+ V R + +  +   A+L           
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADTPPLAKLF----------

Query:  -----------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
                   SPVL+DSSA  PP +      HV R LPFDLNEPPP+WL
Subjt:  -----------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

A0A6J1K1B3 ethylene-responsive transcription factor 12-like5.6e-3658.17Show/hide
Query:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLS---PVFRDSCNADTPPLAKLF-------
        G YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AARSLRGSKAKTNFPL L+ +  C  L+   P    S  + +   A+L        
Subjt:  GQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLS---PVFRDSCNADTPPLAKLF-------

Query:  --------------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL
                      SPVL+DSSA  PP S      HV R LPFDLNEPPP+WL
Subjt:  --------------SPVLLDSSATLPPPSA----NHVHRPLPFDLNEPPPLWL

SwissProt top hitse value%identityAlignment
O80339 Ethylene-responsive transcription factor 39.0e-2378.33Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLD
        ++RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ ++AA AYD AAR+LRG KAKTNFP+D
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLD

O80340 Ethylene-responsive transcription factor 46.9e-2379.69Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLS
        +YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT ++AA AYD AAR  RG+KAKTNFP  L LS
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLS

Q94ID6 Ethylene-responsive transcription factor 124.6e-2744.94Show/hide
Query:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSC-----------------------
        YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AAR LRG KAKTNFP  L+L  N L  +P    +                        
Subjt:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSC-----------------------

Query:  ----------------NADTPPLAKLFSPVLLDSS---ATLPP-------------PSANHVHRPLPFDLNEPPPLWL
                        N  T   +   +P+   SS   AT  P             PS   V R L  DLNEPPPLWL
Subjt:  ----------------NADTPPLAKLFSPVLLDSS---ATLPP-------------PSANHVHRPLPFDLNEPPPLWL

Q9C5I3 Ethylene-responsive transcription factor 111.4e-2362.2Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADT
        +YRGVRKRPWGRYAAEIRDP+KK+RVWLGTFDTP++AA AYD+ A   RG+KAKTNFP   N++ +CL+L+     S   ++
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADT

Q9SXS8 Ethylene-responsive transcription factor 31.2e-2281.36Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPL
        ++RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ + AA AYD AAR+LRG KAKTNFPL
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPL

Arabidopsis top hitse value%identityAlignment
AT1G28360.1 ERF domain protein 123.3e-2844.94Show/hide
Query:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSC-----------------------
        YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTP++AALAYD AAR LRG KAKTNFP  L+L  N L  +P    +                        
Subjt:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSC-----------------------

Query:  ----------------NADTPPLAKLFSPVLLDSS---ATLPP-------------PSANHVHRPLPFDLNEPPPLWL
                        N  T   +   +P+   SS   AT  P             PS   V R L  DLNEPPPLWL
Subjt:  ----------------NADTPPLAKLFSPVLLDSS---ATLPP-------------PSANHVHRPLPFDLNEPPPLWL

AT1G28370.1 ERF domain protein 119.8e-2562.2Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADT
        +YRGVRKRPWGRYAAEIRDP+KK+RVWLGTFDTP++AA AYD+ A   RG+KAKTNFP   N++ +CL+L+     S   ++
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADT

AT1G50640.1 ethylene responsive element binding factor 36.4e-2478.33Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLD
        ++RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ ++AA AYD AAR+LRG KAKTNFP+D
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLD

AT3G15210.1 ethylene responsive element binding factor 44.9e-2479.69Show/hide
Query:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLS
        +YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT ++AA AYD AAR  RG+KAKTNFP  L LS
Subjt:  QYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLS

AT5G44210.1 erf domain protein 92.4e-2384.48Show/hide
Query:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPL
        +RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT ++AA AYD AAR  RGSKAKTNFPL
Subjt:  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTGGGCAGTACAGAGGAGTGAGAAAGCGTCCATGGGGTCGGTACGCGGCGGAGATACGCGACCCATGGAAGAAAACCCGTGTGTGGTTGGGCACTTTCGATAC
GCCTAAACAAGCCGCCCTTGCCTACGACCGCGCCGCCAGGTCCCTCCGAGGCTCCAAGGCCAAGACCAACTTCCCTCTCGACCTCAACCTCTCCTGCAACTGCCTCACTC
TTTCGCCCGTCTTTCGCGATTCATGCAATGCTGACACGCCTCCACTGGCCAAACTCTTTTCTCCTGTGCTGCTGGACTCGAGCGCCACTCTGCCACCGCCCTCCGCTAAC
CACGTCCATCGCCCCCTCCCATTTGATCTCAACGAGCCTCCCCCGCTCTGGCTATAA
mRNA sequenceShow/hide mRNA sequence
TTTTGGACTGATGGGTTGTGGGCAGTACAGAGGAGTGAGAAAGCGTCCATGGGGTCGGTACGCGGCGGAGATACGCGACCCATGGAAGAAAACCCGTGTGTGGTTGGGCA
CTTTCGATACGCCTAAACAAGCCGCCCTTGCCTACGACCGCGCCGCCAGGTCCCTCCGAGGCTCCAAGGCCAAGACCAACTTCCCTCTCGACCTCAACCTCTCCTGCAAC
TGCCTCACTCTTTCGCCCGTCTTTCGCGATTCATGCAATGCTGACACGCCTCCACTGGCCAAACTCTTTTCTCCTGTGCTGCTGGACTCGAGCGCCACTCTGCCACCGCC
CTCCGCTAACCACGTCCATCGCCCCCTCCCATTTGATCTCAACGAGCCTCCCCCGCTCTGGCTATAATACATTCACC
Protein sequenceShow/hide protein sequence
MGCGQYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPKQAALAYDRAARSLRGSKAKTNFPLDLNLSCNCLTLSPVFRDSCNADTPPLAKLFSPVLLDSSATLPPPSAN
HVHRPLPFDLNEPPPLWL