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Sed0018234 (gene) of Chayote v1 genome

Gene IDSed0018234
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:9703083..9703436
RNA-Seq ExpressionSed0018234
SyntenySed0018234
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646857.1 hypothetical protein Csa_020829, partial [Cucumis sativus]5.0e-1757.66Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+R+EVAL N    +     EGVENE+ EDN  LLA  N RG RVLG+G R  RR GR ++  
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP

Query:  RRVERENQYER
        RRVERE Q ER
Subjt:  RRVERENQYER

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]4.1e-1964.52Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG GR  RR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]2.0e-1866.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGR

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]8.2e-2865.77Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP
        MNQDG +G EI+EARWREAQ G I RL QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG    RR GR+I+AP
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP

Query:  RRVERENQYER
        +R+ERE QYER
Subjt:  RRVERENQYER

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]5.0e-1759.46Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP
        M+Q   D  E SEAR+REAQ GVI RLT+VV SL DR+ERMEVAL NPQ  E   N E  +NE+ +DN  LL G N RG  VLGRG   GRR  R I+ P
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP

Query:  RRVERENQYER
        R VERE Q ER
Subjt:  RRVERENQYER

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein3.5e-1654.95Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP
        MN+  ++  +ISEA+  EAQ G I RLTQV+N L++RL+RMEVAL N    E     EGVENE+ EDN   LAG NPRG RVLG+G R  RR  R ++  
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAP

Query:  RRVERENQYER
        RRVE E+Q ER
Subjt:  RRVERENQYER

A0A0A0L0S3 Uncharacterized protein8.3e-1057.32Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRV
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N + + +  N EGVENE  EDN  LLA  NP   RV
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRV

A0A5A7UDQ9 Uncharacterized protein6.8e-0448.65Show/hide
Query:  MEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAPRRVERENQYERSRG
        M+VAL N    E     EGVEN++ EDN  +L G NP+G RVLG+  R  RR G  ++  RRVERE + ER  G
Subjt:  MEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAPRRVERENQYERSRG

A0A6J1EHL9 uncharacterized protein LOC1114326152.0e-1964.52Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG GR  RR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR

A0A6J1ETN1 uncharacterized protein LOC1114364109.7e-1966.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTGGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATTACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGACTGGGTAGGAAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGGAGTAGGGGGAGTAAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTGGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATTACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGACTGGGTAGGAAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGGAGTAGGGGGAGTAAAGCTTAA
Protein sequenceShow/hide protein sequence
MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDYFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRLGRKIIAPRRVERENQYE
RSRGSKA