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Sed0018252 (gene) of Chayote v1 genome

Gene IDSed0018252
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L31
Genome locationLG04:38297033..38300874
RNA-Seq ExpressionSed0018252
SyntenySed0018252
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015888290.1 60S ribosomal protein L31 [Ziziphus jujuba]1.3e-5288.43Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        M DK++K RK EVVTREYTVNLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK++WSRGIR VPRRVRVRIARKRND+ED K+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

XP_022152572.1 60S ribosomal protein L31 [Momordica charantia]4.7e-5593.39Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVKLNK+IWSRGIR VPRRVRVRIA+KRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

XP_023525745.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]4.7e-5593.39Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK+IWSRGIR VPRRVRVRIARKRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EG KGL TKVIDEE+
Subjt:  VAEVPGEGLKGLGTKVIDEED

XP_031401093.1 60S ribosomal protein L31 [Punica granatum]4.4e-5386.78Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK++WSRGIR VPRRVRVR+ARKRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAE+P EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

XP_038903425.1 60S ribosomal protein L31 [Benincasa hispida]1.5e-5695.04Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQ AMGTTDVRVDVKLNKNIWSRGIR VPRRVRVRIARKRND+EDAK+EFYSL+T
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

TrEMBL top hitse value%identityAlignment
A0A218X1Y2 60S ribosomal protein L312.1e-5386.78Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK++WSRGIR VPRRVRVR+ARKRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAE+P EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

A0A6J1A352 60S ribosomal protein L316.3e-5386.78Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        M DK++K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK +WSRGIR VPRRVRVRIARKRND+EDAK+EF+SLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAE+P EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

A0A6J1DGM1 60S ribosomal protein L312.3e-5593.39Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVKLNK+IWSRGIR VPRRVRVRIA+KRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

A0A6P4A0Q9 60S ribosomal protein L316.3e-5388.43Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        M DK++K RK EVVTREYTVNLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK++WSRGIR VPRRVRVRIARKRND+ED K+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAEVP EGLKGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

I3NMM3 60S ribosomal protein L31A6.3e-5387.6Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        M +K+AK RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK+IWSRGIR VPRRVRVRIARKRND+EDAK+EFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        V EVP EG KGLGTKVIDEED
Subjt:  VAEVPGEGLKGLGTKVIDEED

SwissProt top hitse value%identityAlignment
O65071 60S ribosomal protein L313.1e-4977.97Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAE
        +  K+R++EV TREYT+NLH+RLHGCTFKK APKA+KE+RKFAQ AMGTTDVR+DVKLNK +WSRGIR VPRR+RVRI+RKRND+EDAKDE YS+VTVAE
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAE

Query:  VPGEGLKGLGTKVIDEED
        VP EGL GLGTK+I+EED
Subjt:  VPGEGLKGLGTKVIDEED

P46290 60S ribosomal protein L313.3e-5182.64Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        M+DK+ K RK EVVTREYT+NLHKRLH CTFKKKAP AIKE+RKFAQ AMGT DVRVDVKLNK IWSRGIR VPRRVRVRIARKRNDDEDAK+E YSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAE+P +GLKGLGTK+I++ED
Subjt:  VAEVPGEGLKGLGTKVIDEED

P51420 60S ribosomal protein L31-33.7e-5081.74Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IWS+GIRG PRR+RVR+ARKRNDDEDAK+EF+SLVTVAE+P 
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG

Query:  EGLKGLGTKVIDEED
        EGL GLGTKVI+EED
Subjt:  EGLKGLGTKVIDEED

Q9M573 60S ribosomal protein L317.1e-5485.12Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT
        MADK +K RK EVV+REYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNK+IWSRGIR VPRR+RVRIARKRNDDEDAK+E YSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVT

Query:  VAEVPGEGLKGLGTKVIDEED
        VAE+P  GLKGLGT+VIDEE+
Subjt:  VAEVPGEGLKGLGTKVIDEED

Q9STR1 60S ribosomal protein L31-28.1e-5080.87Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG
        K RK EVVTREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IWS+GIRG PRR+RVR+ARKRNDDEDAK+EF+SLVTVAE+P 
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG

Query:  EGLKGLGTKVIDEED
        EGL GLGTK+I+EED
Subjt:  EGLKGLGTKVIDEED

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein3.7e-5078.81Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAE
        +  K RK EVVTREYT+NLH+RLH CTFKKKAP AIKE+RKFA  AMGT DVRVDVKLNK IWS+GIRG PRR+RVR+ARKRNDDEDAK+EF+SLVTVAE
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAE

Query:  VPGEGLKGLGTKVIDEED
        +P EGL GLGTKVI+EE+
Subjt:  VPGEGLKGLGTKVIDEED

AT4G26230.1 Ribosomal protein L31e family protein5.8e-5180.87Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG
        K RK EVVTREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IWS+GIRG PRR+RVR+ARKRNDDEDAK+EF+SLVTVAE+P 
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG

Query:  EGLKGLGTKVIDEED
        EGL GLGTK+I+EED
Subjt:  EGLKGLGTKVIDEED

AT5G56710.1 Ribosomal protein L31e family protein2.6e-5181.74Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IWS+GIRG PRR+RVR+ARKRNDDEDAK+EF+SLVTVAE+P 
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG

Query:  EGLKGLGTKVIDEED
        EGL GLGTKVI+EED
Subjt:  EGLKGLGTKVIDEED

AT5G56710.2 Ribosomal protein L31e family protein3.1e-2856.52Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVD                                  +EF+SLVTVAE+P 
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPG

Query:  EGLKGLGTKVIDEED
        EGL GLGTKVI+EED
Subjt:  EGLKGLGTKVIDEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATAAATCGGCCAAGGCAAGAAAGAGCGAGGTCGTCACCAGGGAGTACACCGTCAATCTCCACAAGCGCTTGCACGGATGCACATTCAAGAAGAAAGCACCCAA
GGCCATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTCGAGTGGACGTGAAACTTAACAAGAATATATGGAGTCGTGGAATTAGGGGCGTGC
CAAGGAGGGTCCGAGTTCGCATTGCCCGAAAACGTAACGACGACGAAGATGCCAAGGATGAATTCTATTCCTTAGTAACTGTTGCAGAGGTACCTGGTGAGGGATTGAAG
GGTTTGGGTACCAAGGTCATTGATGAAGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
TTGAAGTAAATTTATAAAATTCAGCCACTGTCCTCTTCGTTGGGTTGCTAGGGTTTCAGCTTCAGTTTGCAAGGCCGCGAGTAAAAATGGCGGATAAATCGGCCAAGGCA
AGAAAGAGCGAGGTCGTCACCAGGGAGTACACCGTCAATCTCCACAAGCGCTTGCACGGATGCACATTCAAGAAGAAAGCACCCAAGGCCATCAAGGAACTCAGAAAGTT
TGCTCAGAATGCTATGGGTACCACTGATGTTCGAGTGGACGTGAAACTTAACAAGAATATATGGAGTCGTGGAATTAGGGGCGTGCCAAGGAGGGTCCGAGTTCGCATTG
CCCGAAAACGTAACGACGACGAAGATGCCAAGGATGAATTCTATTCCTTAGTAACTGTTGCAGAGGTACCTGGTGAGGGATTGAAGGGTTTGGGTACCAAGGTCATTGAT
GAAGAGGACTAGATTGCTTATACTAGGTCAGTTTTTGGTATGTTATAGCTAACAGATCCATTTTGACTTGAGGGTTTTGCAACTTTAGTGTAGAAATTGTTTATTTCAAT
AATTGATGAGTTTTGCATTAACATTTCTTAGTGATTTCGTACTTTATGACTTTGATTCTGACGGACCAATATTCTGATATCTATTATGAATTAACCATCTTATTACTTAG
CATCAAAATTATGGCTCTATTTAT
Protein sequenceShow/hide protein sequence
MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKNIWSRGIRGVPRRVRVRIARKRNDDEDAKDEFYSLVTVAEVPGEGLK
GLGTKVIDEED