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Sed0018286 (gene) of Chayote v1 genome

Gene IDSed0018286
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG08:5683550..5684104
RNA-Seq ExpressionSed0018286
SyntenySed0018286
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]1.8e-1864.71Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA
        M    KM I+ PS+AK +GDGDGV+GH+CS +  CLCSPTTHPGSFRCRLHRS SLP S+ S    +SA +S TSDLSPKS +SA
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]1.7e-1665.85Show/hide
Query:  KMRITFPSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA
        KM I  PS+AK +G+GDGV G  H+CS +G CLCSPTTHPGSFRCRLHRS SLP S+ S    +SA +S TSDLSPKS +SA
Subjt:  KMRITFPSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA

KAF9662512.1 hypothetical protein SADUNF_Sadunf18G0060900 [Salix dunnii]1.1e-0755.29Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSES--LPCSKLSSS--AVSSPTSDLSPKSDDS
        MA HG + I   S++  SG+G+GV   A  SP+G CLCSPTTH GSFRCRLHRS S   P  K S+S    ++PTS LSPKS +S
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSES--LPCSKLSSS--AVSSPTSDLSPKSDDS

KAG5225644.1 Set1 complex component ash2 [Salix suchowensis]8.5e-0851.19Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSP---TSDLSPKSDDS
        MA HG + I   S++  SG+G+GV   A  SP+G CLCSPTTH GSFRCRLHRS S   S +  S    P    + LSPKS +S
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSP---TSDLSPKSDDS

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2067.06Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSK-----LSSSAVSSPTSDLSPKSDDS
        M+ HGK+RI+ PSSAK  GDGDGV+ H CS +G CLCSPTTHPGSFRCRLHRS SLP ++      SSSA +S TSDLSPKS +S
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSK-----LSSSAVSSPTSDLSPKSDDS

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein3.7e-1763.22Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA
        M    KM I  PS+AK +G+GDGV G  H+CS +G CLCSPTTHPGSFRCRLHRS SLP S+ S    +SA +S TSDLSPKS +SA
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA

A0A5D3BJV5 Uncharacterized protein8.8e-1964.71Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA
        M    KM I+ PS+AK +GDGDGV+GH+CS +  CLCSPTTHPGSFRCRLHRS SLP S+ S    +SA +S TSDLSPKS +SA
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLS----SSAVSSPTSDLSPKSDDSA

A0A5N6QHE2 Uncharacterized protein1.6e-0748.78Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSS--AVSSPTSDLSPKSDDS
        MA HG + +   S++  SG  + V G + SP+G CLCSPTTH GSFRCR HRS S    K S S  A +S  + +SPKS +S
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSS--AVSSPTSDLSPKSDDS

A0A6A1UK22 Uncharacterized protein5.4e-0853.62Show/hide
Query:  SSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDSA
        S+   SG G+ V+G + SP+G CLCSPTTH GSFRCRLHRS S    +  S   SS  + LSPKS +S+
Subjt:  SSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDSA

A0A6N2KNM0 Uncharacterized protein5.4e-0851.19Show/hide
Query:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSP---TSDLSPKSDDS
        MA HG + I   S++  SG+G+GV   A  SP+G CLCSPTTH GSFRCRLHRS S   S +  S    P    + LSPKS +S
Subjt:  MAGHGKMRITFPSSAKISGDGDGVSGHAC-SPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSP---TSDLSPKSDDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein1.6e-0443.1Show/hide
Query:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS
        G+S      +  C+CSPTTHPGSF+C+LHR+ SL  +K   S  ++    L  K D S
Subjt:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS

AT1G67910.1 unknown protein2.9e-0650Show/hide
Query:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS
        G+S      +  CLCSPTTHPGSFRCR+HRS SL  +K   S  ++   D  PK  DS
Subjt:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS

AT1G67910.2 unknown protein2.9e-0650Show/hide
Query:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS
        G+S      +  CLCSPTTHPGSFRCR+HRS SL  +K   S  ++   D  PK  DS
Subjt:  GVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDS

AT3G13227.1 serine-rich protein-related2.1e-0444.62Show/hide
Query:  PSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLS
        P   +  G G G  G   + S R  CLC+PTTHPGSFRCR HR      + L  S  +S  S+LS
Subjt:  PSSAKISGDGDGVSG--HACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLS

AT5G11090.1 serine-rich protein-related1.6e-0443.48Show/hide
Query:  PSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLP
        P++  IS   +    H       C+CSPTTHPGSFRC LH++ + P
Subjt:  PSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCCACGGCAAGATGAGAATCACTTTCCCGTCCTCCGCCAAAATTTCCGGCGACGGCGACGGCGTGTCCGGGCACGCATGCTCGCCCAGAGGCACGTGCCTGTG
CTCTCCGACCACCCATCCCGGCTCCTTCCGGTGCCGGCTCCACCGCTCCGAATCGCTGCCGTGTTCCAAGCTCTCCTCCTCCGCCGTTTCCTCCCCCACCTCCGATCTCT
CGCCCAAGTCCGATGATTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAAATGGCAGGCCACGGCAAGATGAGAATCACTTTCCCGTCCTCCGCCAAAATTTCCGGCGACGGCGACGGCGTGTCCGGGCACGCATGCTCGCCCAGAGGCACGT
GCCTGTGCTCTCCGACCACCCATCCCGGCTCCTTCCGGTGCCGGCTCCACCGCTCCGAATCGCTGCCGTGTTCCAAGCTCTCCTCCTCCGCCGTTTCCTCCCCCACCTCC
GATCTCTCGCCCAAGTCCGATGATTCTGCTTGATTTCTATTTAAACCACAGAAATAAATGATTCAAATCCTGATGATCTGTAGATATCGGTGATGTCTTTGTGGTTTTTC
GGTGTTTTGATTTCGATTTCGGATATCCAGTCTTGTTGTCTTGTAATTTCTGGATAATTCTCGTTTTTTTTTGTTTTGTTTTATTTTGAAGCTCTTTTTGCTGTAAATTT
GGATGATGGGAATGGAATTACCAAATGTTTATTACTGTGTGTTTGGGTGTTGTAAATTTGAAGCTATTTACGCTCCGCTCTTTCCGATATTTAAATCTGCTTCGCTCCTA
CGAAC
Protein sequenceShow/hide protein sequence
MAGHGKMRITFPSSAKISGDGDGVSGHACSPRGTCLCSPTTHPGSFRCRLHRSESLPCSKLSSSAVSSPTSDLSPKSDDSA