CuGenDBv2

Gene ID	Sed0018292
Organism	Sechium edule (Chayote v1)
Description	SnoaL-like domain-containing protein
Genome location	LG03:614549..616386
RNA-Seq Expression	Sed0018292
Synteny	Sed0018292
Gene Ontology terms	NA
InterPro domains	IPR032710 - NTF2-like domain superfamily IPR037401 - SnoaL-like domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602392.1 hypothetical protein SDJN03_07625, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-72

71.04

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH
        M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH

Query:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA
        +CVYEDLIFS PFVGRK+IL FF K  DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGEMA
Subjt:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA

Query:  LTAIRGVTWLLEKFPQLADRI
        LT IRGVTWLLE+FPQLADRI
Subjt:  LTAIRGVTWLLEKFPQLADRI

XP_022133956.1 uncharacterized protein LOC111006367 isoform X1 [Momordica charantia]

3.1e-73

72.52

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIA
        M S+LS PS+   +IF+NP  S+PP   S F  S   T TP +S LRL SS    P+ AV SP TN PLDA   SASDVV+DFY GINRRDL SV  LIA
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIA

Query:  HSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEM
         +CVYEDLIFS PFVGR++IL FF KF DSIS DLQFVIDDIST+DSSAVGVLWHLEWKGKEFPFSKGCSFYRLV+ ADG RQIIY RDSVEPA KPGEM
Subjt:  HSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEM

Query:  ALTAIRGVTWLLEKFPQLADRI
        ALTAI+GVTWLLE+FPQLADR+
Subjt:  ALTAIRGVTWLLEKFPQLADRI

XP_022955016.1 uncharacterized protein LOC111457092 isoform X2 [Cucurbita moschata]

7.0e-73

71.04

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH
        M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SS       S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH

Query:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA
        +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGEMA
Subjt:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA

Query:  LTAIRGVTWLLEKFPQLADRI
        LT IRGVTWLLE+FPQLADRI
Subjt:  LTAIRGVTWLLEKFPQLADRI

XP_022991155.1 uncharacterized protein LOC111487838 isoform X2 [Cucurbita maxima]

2.4e-73

71.49

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH
        M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH

Query:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA
        +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGEMA
Subjt:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA

Query:  LTAIRGVTWLLEKFPQLADRI
        LT IRGVTWLLE+FPQLADRI
Subjt:  LTAIRGVTWLLEKFPQLADRI

XP_023518153.1 uncharacterized protein LOC111781680 isoform X3 [Cucurbita pepo subsp. pepo]

2.4e-73

71.75

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Query:  MKSILSQPSQECCSIFINPTNSS--PPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLI
        M S+ S PS     +  N   S+  PP LIS   QSFTLT TP+T+   PLR SSS      S ++N P+D    SASDVV+ FYDG+NR DLASVEDLI
Subjt:  MKSILSQPSQECCSIFINPTNSS--PPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLI

Query:  AHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGE
        A +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGE
Subjt:  AHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGE

Query:  MALTAIRGVTWLLEKFPQLADRI
        MALT IRGVTWLLE+FPQLADRI
Subjt:  MALTAIRGVTWLLEKFPQLADRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQZ4 SnoaL-like domain-containing protein

3.7e-72

71.56

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVED
        M SILS  S     IF N   S  PF   P   SFT    PK    SPLR+SSS    P   VPSP T+ PLD    SAS+VV+DFYDG+NR DLASVE 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVED

Query:  LIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKP
        LIA +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDIST+DSSA+GVLWHLEWKGKEFPFSKGCSFYRL    DGK+QIIYARDSVEPAFKP
Subjt:  LIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKP

Query:  GEMALTAIRGVTWLLEKFPQLADRI
        GEMALTAIRGVTWLLE+FPQLADRI
Subjt:  GEMALTAIRGVTWLLEKFPQLADRI

A0A1S3C8U3 uncharacterized protein LOC103498136 isoform X1

6.4e-72

70.67

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVED
        M SILS  S     IF N   S PPF   P   SFT    P+    SPLR+SSS    P   VPSP T+ PLD    SAS VV++FYDG+NR DLASVE 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVED

Query:  LIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKP
        LIA +CVYEDL+FS PFVGRK+IL FF KF DSIS DLQFVIDDIST+DSSA+GVLWHLEWKGKEFPFSKGCSFYRL    DGK+QIIYARDSVEPAFKP
Subjt:  LIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKP

Query:  GEMALTAIRGVTWLLEKFPQLADRI
        GEMALTAIRGVTWLLE+FPQLADRI
Subjt:  GEMALTAIRGVTWLLEKFPQLADRI

A0A6J1BWM3 uncharacterized protein LOC111006367 isoform X1

1.5e-73

72.52

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIA
        M S+LS PS+   +IF+NP  S+PP   S F  S   T TP +S LRL SS    P+ AV SP TN PLDA   SASDVV+DFY GINRRDL SV  LIA
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIA

Query:  HSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEM
         +CVYEDLIFS PFVGR++IL FF KF DSIS DLQFVIDDIST+DSSAVGVLWHLEWKGKEFPFSKGCSFYRLV+ ADG RQIIY RDSVEPA KPGEM
Subjt:  HSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEM

Query:  ALTAIRGVTWLLEKFPQLADRI
        ALTAI+GVTWLLE+FPQLADR+
Subjt:  ALTAIRGVTWLLEKFPQLADRI

A0A6J1GSJ5 uncharacterized protein LOC111457092 isoform X2

3.4e-73

71.04

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH
        M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SS       S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH

Query:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA
        +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGEMA
Subjt:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA

Query:  LTAIRGVTWLLEKFPQLADRI
        LT IRGVTWLLE+FPQLADRI
Subjt:  LTAIRGVTWLLEKFPQLADRI

A0A6J1JS34 uncharacterized protein LOC111487838 isoform X2

1.2e-73

71.49

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Query:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH
        M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA 
Subjt:  MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAH

Query:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA
        +CVYEDLIFS PFVGRK+IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    KRQIIYARDSVEPA KPGEMA
Subjt:  SCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA

Query:  LTAIRGVTWLLEKFPQLADRI
        LT IRGVTWLLE+FPQLADRI
Subjt:  LTAIRGVTWLLEKFPQLADRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein

2.2e-61

63.5

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Query:  NSSPPFLISPFPQSFTLTPTPKT--SPLRLSSSPVAAVPSPATNPPL-DAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL
        N  PP    P   +  + PT  T   P RLS+S   A  +   N  + + AP SAS+VV  FY  +N  DL+SV DLIA  CVYEDL+FSSPFVGRK IL
Subjt:  NSSPPFLISPFPQSFTLTPTPKT--SPLRLSSSPVAAVPSPATNPPL-DAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL

Query:  GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADR
         FF KF++S S DLQFVIDDIST+DSSAVGV WHLEWKGK FPFSKGCSFYRL V  DGKRQI+Y RD VEPA KPGE  L AI+GVTWLL+KFPQLAD+
Subjt:  GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADR

AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein

5.2e-26

34.25

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Query:  SASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRL
        S  D V  FY  IN ++   +   I+  C  +D  F  PF G++E + FF + V S+  +++F ++++   D  +  V WHLEWKG++ PF++GCSFY  
Subjt:  SASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRL

Query:  VVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLAD
         +   G+  I  AR  +E   KPG + L+ ++ +T+L ++FP+ A+
Subjt:  VVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLAD

Sequences

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CDS sequence

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ATGAAGTCCATCTTGTCACAGCCATCTCAAGAATGTTGTTCCATCTTCATCAACCCCACAAATTCATCTCCTCCGTTTCTAATCTCTCCATTTCCCCAATCTTTCACTCT
CACTCCAACACCCAAAACATCTCCTCTTCGCCTCTCCTCTTCTCCGGTCGCCGCCGTTCCATCTCCGGCCACCAATCCCCCTCTCGACGCCGCCCCTCCATCCGCTTCCG
ATGTCGTCAAGGACTTCTACGACGGAATCAACCGCCGCGACCTCGCCTCCGTCGAGGACCTCATTGCCCACAGTTGCGTTTACGAGGACCTTATCTTTTCCAGCCCTTTT
GTTGGCCGCAAGGAAATTCTGGGTTTCTTCCACAAGTTTGTCGATTCCATCAGTATGGATCTTCAGTTCGTGATTGACGATATATCCACCCAAGACTCCTCTGCTGTTGG
TGTTCTTTGGCATTTGGAATGGAAAGGGAAAGAGTTTCCTTTTAGCAAGGGATGCAGTTTTTATCGCTTGGTTGTTGCTGCTGATGGAAAGAGGCAAATAATTTATGCTC
GAGACAGTGTTGAGCCTGCATTCAAGCCTGGAGAGATGGCTCTGACAGCCATTAGAGGTGTGACCTGGCTTCTGGAAAAATTCCCTCAGCTAGCAGATCGGATATAA

mRNA sequence

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Protein sequence

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MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPF
VGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI

Sed0018292 (gene) of Chayote v1 genome