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Sed0018312 (gene) of Chayote v1 genome

Gene IDSed0018312
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:71353961..71354613
RNA-Seq ExpressionSed0018312
SyntenySed0018312
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606390.1 hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2875Show/hide
Query:  ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGG--GFVHAPPAIPDSARVASAAQSS
        ILL NPMEA RV+ GEKW K K+D  FVL IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAGG   FV APPAI D A +ASAAQSS
Subjt:  ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGG--GFVHAPPAIPDSARVASAAQSS

KAG6738307.1 hypothetical protein POTOM_057918 [Populus tomentosa]2.8e-1143Show/hide
Query:  MGISKRG-CL---VFFVLMFILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPDS
        MG  +R  CL   +F  ++F   ++ + A R ++GE+W K+      +  IQ L+RAPVPPSG +PC + PG+G+G C L  MN AG    HAPPA PD+
Subjt:  MGISKRG-CL---VFFVLMFILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPDS

TXG63783.1 hypothetical protein EZV62_010777 [Acer yangbiense]5.7e-1243.27Show/hide
Query:  LVFFVLMFILLANP----MEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPD---SARVAS
        +V  + M +L+A+     + ATR ++G++WT ++++    L  Q LQ+ P+PPSGRNPC N+PGQG+G CTL   N AGG     PPA P       VAS
Subjt:  LVFFVLMFILLANP----MEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPD---SARVAS

Query:  AAQS
         A+S
Subjt:  AAQS

XP_022931191.1 uncharacterized protein LOC111437447 [Cucurbita moschata]3.8e-3273.39Show/hide
Query:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA
        MG+SKR  LVFFVLM  ILL NPMEA RV+ G KW K K+D  FVL IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAG  G FV APPAI D A
Subjt:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA

Query:  RVASAAQSS
         +ASAAQSS
Subjt:  RVASAAQSS

XP_022995941.1 uncharacterized protein LOC111491306 [Cucurbita maxima]4.5e-3374.31Show/hide
Query:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA
        MG+SKR  LVFFVL+F ILL NPMEA RV+ GEKW K K+D  FVL IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAG  G FV APPAI D A
Subjt:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA

Query:  RVASAAQSS
         +ASAAQSS
Subjt:  RVASAAQSS

TrEMBL top hitse value%identityAlignment
A0A0A0LCX8 Uncharacterized protein7.7e-2361.26Show/hide
Query:  MGISKRGCLVFFVLMFILLANPMEATRVIKGEKWTKEKED--TPFVLG-IQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHA-PPAIPDS
        MGIS++  L+FF+++ +  +  M   RV+K EKW KE+++  + FVL  IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAG  FVHA PP IPDS
Subjt:  MGISKRGCLVFFVLMFILLANPMEATRVIKGEKWTKEKED--TPFVLG-IQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHA-PPAIPDS

Query:  A-RVASAAQSS
        A  V S AQSS
Subjt:  A-RVASAAQSS

A0A5C7I2P2 Uncharacterized protein2.8e-1243.27Show/hide
Query:  LVFFVLMFILLANP----MEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPD---SARVAS
        +V  + M +L+A+     + ATR ++G++WT ++++    L  Q LQ+ P+PPSGRNPC N+PGQG+G CTL   N AGG     PPA P       VAS
Subjt:  LVFFVLMFILLANP----MEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPD---SARVAS

Query:  AAQS
         A+S
Subjt:  AAQS

A0A6J1ET04 uncharacterized protein LOC1114374471.8e-3273.39Show/hide
Query:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA
        MG+SKR  LVFFVLM  ILL NPMEA RV+ G KW K K+D  FVL IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAG  G FV APPAI D A
Subjt:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA

Query:  RVASAAQSS
         +ASAAQSS
Subjt:  RVASAAQSS

A0A6J1K3A7 uncharacterized protein LOC1114913062.2e-3374.31Show/hide
Query:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA
        MG+SKR  LVFFVL+F ILL NPMEA RV+ GEKW K K+D  FVL IQVLQRAPVPPSGRNPC  +PGQ NGRCTLQ MNVAG  G FV APPAI D A
Subjt:  MGISKRGCLVFFVLMF-ILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAG--GGFVHAPPAIPDSA

Query:  RVASAAQSS
         +ASAAQSS
Subjt:  RVASAAQSS

B9I5L3 Uncharacterized protein2.3e-1140.91Show/hide
Query:  MGISKRG-CLVFFVLMFILLANPME---ATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPDS
        MG  +R  CL   + + I+L +  +   A R ++GE+W+++      V  IQ LQR PVPPSG +PC ++PG+G+G+C+L  MN AG     APPA PD+
Subjt:  MGISKRG-CLVFFVLMFILLANPME---ATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPDS

Query:  ARVASAAQSS
             AA S+
Subjt:  ARVASAAQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATCTCTAAAAGAGGTTGCTTGGTGTTCTTTGTGTTGATGTTCATTTTGTTGGCTAATCCTATGGAGGCAACCAGGGTTATCAAAGGAGAGAAATGGACGAAGGA
AAAGGAAGATACGCCTTTCGTGTTGGGTATTCAAGTCCTGCAGCGTGCCCCAGTGCCACCGTCCGGTCGCAACCCCTGCGGTAATGTTCCCGGCCAAGGCAATGGCCGAT
GCACACTCCAGGCGATGAATGTTGCAGGTGGTGGTTTCGTCCATGCGCCACCTGCTATCCCCGACTCGGCTCGGGTCGCCTCAGCTGCTCAAAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTACAAACTCCTTCACCTACTTGTAACAAACACAAAAGTTGGTTTAAAGGCCTCTCTTTCTCGCTAACCCGTCCTGTTGGATCCGTTTATTCTTTCTCGTTATCCCGGT
CGAGTCTCAAACATTTATAACGAAAAGAAAAAAGCTTAAGCTTGTTCGATAATATTTTCGAGATATGGGGATCTCTAAAAGAGGTTGCTTGGTGTTCTTTGTGTTGATGT
TCATTTTGTTGGCTAATCCTATGGAGGCAACCAGGGTTATCAAAGGAGAGAAATGGACGAAGGAAAAGGAAGATACGCCTTTCGTGTTGGGTATTCAAGTCCTGCAGCGT
GCCCCAGTGCCACCGTCCGGTCGCAACCCCTGCGGTAATGTTCCCGGCCAAGGCAATGGCCGATGCACACTCCAGGCGATGAATGTTGCAGGTGGTGGTTTCGTCCATGC
GCCACCTGCTATCCCCGACTCGGCTCGGGTCGCCTCAGCTGCTCAAAGCTCTTGATGTTTGTTTCATAAGGGTGGAACCATGGAGAGGCTGTGATCAGTTTCATGAAGAA
ATTGAAATATTCTTTTGATTTTTACCTTTATTGTAATTTTCATTTTTTAATTTAATTATTTTTTTTAATGGGATGCATAAAAAAAGAACTGGCTGCAACCCAC
Protein sequenceShow/hide protein sequence
MGISKRGCLVFFVLMFILLANPMEATRVIKGEKWTKEKEDTPFVLGIQVLQRAPVPPSGRNPCGNVPGQGNGRCTLQAMNVAGGGFVHAPPAIPDSARVASAAQSS