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Sed0018329 (gene) of Chayote v1 genome

Gene IDSed0018329
OrganismSechium edule (Chayote v1)
DescriptionGRIP and coiled-coil domain-containing protein
Genome locationLG03:5719278..5722879
RNA-Seq ExpressionSed0018329
SyntenySed0018329
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2584.93Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+ NE S GGFLK +FR LK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]2.4e-2584.93Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARA GRSRN ++SS GGFLK  FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]4.0e-2583.56Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+ NE S GGFLK +FR LK+ EFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
XP_022993749.1 uncharacterized protein LOC111489659 [Cucurbita maxima]4.8e-2686.3Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MA AGGRSR+ NE S GGFLKT+FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
XP_023549700.1 uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]3.6e-2686.3Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+ NE S GGFLK +FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
TrEMBL top hitse value%identityAlignment
A0A0A0KPT8 Uncharacterized protein1.3e-2483.56Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARA GR RN  +SS GGFLK  FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
A0A1S3CK24 uncharacterized protein LOC1035013531.1e-2584.93Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARA GRSRN ++SS GGFLK  FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
A0A6J1CIZ9 uncharacterized protein LOC1110117894.3e-2579.45Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MAR GGRSRN N+S+V GFLK + RFLK+AEFEILF+LFF++AF++FKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
A0A6J1FE48 uncharacterized protein LOC1114446982.0e-2583.56Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+ NE S GGFLK +FR LK+ EFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
A0A6J1K0Z3 uncharacterized protein LOC1114896592.3e-2686.3Show/hide
Query:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
        MA AGGRSR+ NE S GGFLKT+FRFLK+AEFEILFVLFFI+AF+VFKDLTSR EYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14430.1 unknown protein1.2e-1450.67Show/hide
Query:  MARAGGRSR---NANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPF
        + R  G +R     ++S +  F+ ++F F ++AEFEILFVLF +I +++FKDLTSR EYN+ILV+KP G D+WPF
Subjt:  MARAGGRSR---NANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGGGCAGGTGGTCGGAGCAGAAACGCGAACGAATCGTCGGTGGGAGGGTTTCTGAAAACGATATTCAGATTCTTGAAGGTCGCCGAGTTTGAGATCCTCTTCGT
TCTCTTCTTCATCATCGCGTTTCTTGTCTTCAAAGATCTTACTTCAAGAGCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGGTTTGATATGTGGCCATTCCAGT
AA
mRNA sequenceShow/hide mRNA sequence
GAAATCAATTTTTTATTTTTTGTTTTTTGTTTTTTGTTTTCACGTTCAATTTCCGAATTGAAAAGAGAAAAAGTTGGGAACCAAATTAATATCTGGAAATAACCCCTTGT
TCTGTTGATCGTCAAAAGCGAAATTCGTCGTCGGTGGCTATGGCTAGGGCAGGTGGTCGGAGCAGAAACGCGAACGAATCGTCGGTGGGAGGGTTTCTGAAAACGATATT
CAGATTCTTGAAGGTCGCCGAGTTTGAGATCCTCTTCGTTCTCTTCTTCATCATCGCGTTTCTTGTCTTCAAAGATCTTACTTCAAGAGCAGAGTACAATCAGATCCTTG
TAAAGAAGCCTGAGGGGTTTGATATGTGGCCATTCCAGTAAAATTTTCACCTTGCATTCTAAGCTTGCATCTTTTTTGTGTTAATATACAGGATGATGTAAAAATGTTTA
TTGACATACAGATATTTTTGTTGACGTTTTCGTAAATTGAAAGACTTTGAAGTAAA
Protein sequenceShow/hide protein sequence
MARAGGRSRNANESSVGGFLKTIFRFLKVAEFEILFVLFFIIAFLVFKDLTSRAEYNQILVKKPEGFDMWPFQ