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Sed0018337 (gene) of Chayote v1 genome

Gene IDSed0018337
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:4113119..4113414
RNA-Seq ExpressionSed0018337
SyntenySed0018337
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056089.1 hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa]1.6e-2780.72Show/hide
Query:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        SSA+NKRQK PKS SC FSIF LF+SRDGG+R D+A  +DDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH QIRS E +
Subjt:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

KAG6586063.1 hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2981.48Show/hide
Query:  MSSAHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        M+S +NKRQKPKSPSCFFSIFSLFRSRD  +RRDE IDD RKVWPSD D+ R+WVAEPGIDRKAKAYI+KIHTQIRS  TE
Subjt:  MSSAHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

KAG6599163.1 hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2168.35Show/hide
Query:  MSSAHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDE---AIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIR
        M+S++++R+KPKSPSC FSI +LF+SR   +R D+   A++DTRKVWPSD DKGRHWVAEPGIDRKAKAYI++IH QIR
Subjt:  MSSAHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDE---AIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIR

XP_010094905.1 uncharacterized protein LOC21405464 [Morus notabilis]4.1e-1052.05Show/hide
Query:  HNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRS
        +N   + K  S FFS+F   R+R   R  D A++D R+VWPSD D+GR WVAEPGIDRKA+A+I KIH  + +
Subjt:  HNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRS

XP_021898970.1 uncharacterized protein LOC110815469 [Carica papaya]1.8e-1063.24Show/hide
Query:  RQKPKSPSCFFSIFSLFRSRDGGRRRDE---AIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH
        RQK  S S  FSIF LF+SR   RR  +    +DDTRKVWPSD DK R+WVAEPGIDRKA A+I K H
Subjt:  RQKPKSPSCFFSIFSLFRSRDGGRRRDE---AIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH

TrEMBL top hitse value%identityAlignment
A0A067E306 Uncharacterized protein9.8e-1048.78Show/hide
Query:  AHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDT----RKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        A NK++K       FS+ ++F+SR   RR ++  DD     RK+WPSD DKG +WVAEPGIDRKA A+I K H + R  E+E
Subjt:  AHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDT----RKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

A0A0A0LJ24 Uncharacterized protein1.0e-2780.72Show/hide
Query:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        SSA+NKRQK  KS SC FSIFSLF+SRDGG+R D+A  +DDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH QIRS +T+
Subjt:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

A0A5D3BDY2 Uncharacterized protein7.9e-2880.72Show/hide
Query:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        SSA+NKRQK PKS SC FSIF LF+SRDGG+R D+A  +DDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH QIRS E +
Subjt:  SSAHNKRQK-PKSPSCFFSIFSLFRSRDGGRRRDEA--IDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

V4SLM0 Uncharacterized protein9.8e-1048.78Show/hide
Query:  AHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDT----RKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE
        A NK++K       FS+ ++F+SR   RR ++  DD     RK+WPSD DKG +WVAEPGIDRKA A+I K H + R  E+E
Subjt:  AHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDT----RKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE

W9R5Q4 Uncharacterized protein2.0e-1052.05Show/hide
Query:  HNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRS
        +N   + K  S FFS+F   R+R   R  D A++D R+VWPSD D+GR WVAEPGIDRKA+A+I KIH  + +
Subjt:  HNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.1e-0855.93Show/hide
Query:  FSIFSLFRSRDGGR-RRDEAIDD---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH
        FS+FS F++R   R   D + DD   TRK   SD DK R+WVAEPGIDRKA A+I K H
Subjt:  FSIFSLFRSRDGGR-RRDEAIDD---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH

AT5G26620.1 unknown protein2.0e-0764.29Show/hide
Query:  DEAIDD---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH
        D + DD   TRK W SD DK R+WVAEPGIDRKA A+I K H
Subjt:  DEAIDD---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCAGCCCACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTCTCGATCTTCAGCTTGTTCAGATCCCGAGATGGTGGAAGGAGGCGAGACGAAGCGAT
AGATGATACGCGAAAGGTGTGGCCGAGCGATGGCGACAAAGGCCGACACTGGGTGGCCGAGCCTGGCATCGATAGGAAGGCTAAGGCTTACATCGAGAAGATCCATACTC
AAATCCGATCATTCGAAACCGAATGA
mRNA sequenceShow/hide mRNA sequence
CAAACTCTCTTATAATCTTCTACACAAAAACACCAACTTCTCTCTTAGCCATGTCCTCAGCCCACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTCTCGATC
TTCAGCTTGTTCAGATCCCGAGATGGTGGAAGGAGGCGAGACGAAGCGATAGATGATACGCGAAAGGTGTGGCCGAGCGATGGCGACAAAGGCCGACACTGGGTGGCCGA
GCCTGGCATCGATAGGAAGGCTAAGGCTTACATCGAGAAGATCCATACTCAAATCCGATCATTCGAAACCGAATGA
Protein sequenceShow/hide protein sequence
MSSAHNKRQKPKSPSCFFSIFSLFRSRDGGRRRDEAIDDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIEKIHTQIRSFETE