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Sed0018338 (gene) of Chayote v1 genome

Gene IDSed0018338
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1537658..1538267
RNA-Seq ExpressionSed0018338
SyntenySed0018338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1664.71Show/hide
Query:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVM-GSRLIARQLDSSWKGNYFPPP--LPPPPPCSS
        MASPTALVAW K  FL  LL+A +VSAREL G +NV+ R  REM    NGV+ GSRLIARQLD++W+G+Y PPP   PPPPP SS
Subjt:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVM-GSRLIARQLDSSWKGNYFPPP--LPPPPPCSS
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1665.48Show/hide
Query:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPP----PLPPPPPC
        MASP+A V W + +F ALLLLAFNVSAREL GT N++AR   EM  ETN  +G RLIARQLD+SW GNY PP    P PPPPPC
Subjt:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPP----PLPPPPPC
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-1664.71Show/hide
Query:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGV-MGSRLIARQLDSSWKGNYFPPP--LPPPPPCSS
        MASPTALVAW K  FL  LL+A +VSAREL G +NV+ R  REM    NGV +GSRLIARQLD++W+G+Y PPP   PPPPP SS
Subjt:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGV-MGSRLIARQLDSSWKGNYFPPP--LPPPPPCSS
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1766.27Show/hide
Query:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPP---LPPPPPC
        MASP+A V W + +F ALLLLAFNVSAREL GT N++AR   EM  ETN  +G RLIARQLD+SW GNY PPP    PPPPPC
Subjt:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPP---LPPPPPC
KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]2.0e-0955.13Show/hide
Query:  MASPT-ALVAWNKA-IFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPPLPP
        MA+ T A VAW K  IF  LLLLA+N+SAREL   +     +T EM    N V+  RL  RQLD+SW+GNYFPPP PP
Subjt:  MASPT-ALVAWNKA-IFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPPLPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein9.9e-1055.13Show/hide
Query:  MASPT-ALVAWNKA-IFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPPLPP
        MA+ T A VAW K  IF  LLLLA+N+SAREL   +     +T EM    N V+  RL  RQLD+SW+GNYFPPP PP
Subjt:  MASPT-ALVAWNKA-IFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPPLPP
A0A0A0LB11 Uncharacterized protein9.2e-0854.88Show/hide
Query:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIK-ETNGVMGSRLIARQLDSSWKGNYFPPP--LPPPPP
        MA+P  LV      F +LLLLAFN S       + V+AR  REM+  ETN  MG +L ARQLD+SWKGNY PPP   PPPPP
Subjt:  MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIK-ETNGVMGSRLIARQLDSSWKGNYFPPP--LPPPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACCAACAGCTTTGGTTGCTTGGAACAAGGCTATCTTTCTTGCTTTGCTTCTTCTTGCTTTCAACGTTTCAGCTCGAGAACTTACGGGAACGTCCAATGTCAT
GGCTCGCATGACCCGCGAGATGATAAAGGAAACTAATGGTGTGATGGGGTCGAGATTAATTGCTAGACAATTGGATTCCTCTTGGAAAGGAAATTATTTTCCTCCCCCTC
TTCCTCCTCCTCCTCCATGTTCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
GAGCTTTCTACAATCACAAACCAATGGCTTCACCAACAGCTTTGGTTGCTTGGAACAAGGCTATCTTTCTTGCTTTGCTTCTTCTTGCTTTCAACGTTTCAGCTCGAGAA
CTTACGGGAACGTCCAATGTCATGGCTCGCATGACCCGCGAGATGATAAAGGAAACTAATGGTGTGATGGGGTCGAGATTAATTGCTAGACAATTGGATTCCTCTTGGAA
AGGAAATTATTTTCCTCCCCCTCTTCCTCCTCCTCCTCCATGTTCCTCCTAATGGAAATGTCTTCAAAGTTTGTGTGTATTTAATCATTAGTTATAACTTTTTGTGGGTG
TTGGGTGTGGATATAATAAGGATCTCACCAAATAAATTATATGAAGAACTTCTTTTTATGTAAGGTTTTGGCCAAATACATATACCCTTTTGATGTAATAGTCAGCTTGA
ATAATTGAAGTTTAATAGCAATGTATTTTTT
Protein sequenceShow/hide protein sequence
MASPTALVAWNKAIFLALLLLAFNVSARELTGTSNVMARMTREMIKETNGVMGSRLIARQLDSSWKGNYFPPPLPPPPPCSS