; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018339 (gene) of Chayote v1 genome

Gene IDSed0018339
OrganismSechium edule (Chayote v1)
DescriptionLysM domain-containing protein
Genome locationLG10:32435676..32438582
RNA-Seq ExpressionSed0018339
SyntenySed0018339
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459633.1 PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]8.0e-6254.51Show/hide
Query:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------
        +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+SK QLS KHHF  I+E  +SL SI N+NG P          
Subjt:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------

Query:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE
                K Q+IKI  PR    I D +QL+EKLQ++LNGL  +   F LA   LP ARTTS IVLVPL++ C R II ASYARVFG+ + K +NK E E
Subjt:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE

Query:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
         HKFRSGHWRSALRDIRELDG + E+ +DS+S  E+EQ+SVE+LSHAYKKLDQDY++FLSE GLSK
Subjt:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK

XP_022141745.1 uncharacterized protein LOC111012032 isoform X1 [Momordica charantia]1.0e-6155.88Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E      G++ TSIL QNGV    
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---

Query:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK
                       K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++K
Subjt:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK

Query:  SEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        SE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  SEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

XP_022141746.1 uncharacterized protein LOC111012032 isoform X2 [Momordica charantia]4.2e-6356.51Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E      G++ TSIL QNGV    
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---

Query:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK
                       K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++K
Subjt:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK

Query:  SEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        SE EHHKFRSGHWRSALRDIRELDG +SES+ D SS   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  SEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

XP_022141747.1 uncharacterized protein LOC111012032 isoform X3 [Momordica charantia]1.5e-6356.93Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP--------
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E G++ TSIL QNGV         
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP--------

Query:  ----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREH
                  K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++KSE EH
Subjt:  ----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREH

Query:  HKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        HKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  HKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

XP_038890844.1 uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida]9.7e-6859.4Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH--------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP-------
        +VKLSQRNRA         +PQPT PSL H        +SLKNQFRAI  +   WRFQLQD+SK+QLS KHH   I+E  +SLT   NQNG P       
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH--------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP-------

Query:  -----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE
                   K Q+IKI  PRAI D YQL+EKLQS+LN L  +   F LA   LP ARTTS IVLVPLIV CAR II ASYARVFG+SR + V+K E +
Subjt:  -----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE

Query:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
        HHKFRSGHWRSALRDIRELDG + ES +DS S  E+EQ+S E+LSH YKKLDQDY++FLSE GLSK
Subjt:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK

TrEMBL top hitse value%identityAlignment
A0A1S3CBV5 uncharacterized protein LOC103498697 isoform X23.9e-6254.51Show/hide
Query:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------
        +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+SK QLS KHHF  I+E  +SL SI N+NG P          
Subjt:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------

Query:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE
                K Q+IKI  PR    I D +QL+EKLQ++LNGL  +   F LA   LP ARTTS IVLVPL++ C R II ASYARVFG+ + K +NK E E
Subjt:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE

Query:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
         HKFRSGHWRSALRDIRELDG + E+ +DS+S  E+EQ+SVE+LSHAYKKLDQDY++FLSE GLSK
Subjt:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK

A0A5A7T6Z4 LysM domain-containing protein2.5e-6154.51Show/hide
Query:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------
        +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+SK QLS KHHF  I+E  +SL SI N+NG P          
Subjt:  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP----------

Query:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE
                K Q+IKI   RA   I D +QL+EKLQS+LNGL  +   F LA   LP ARTTS IVLVPL++ C R II ASYARVFG+ + K +NK E E
Subjt:  --------KWQDIKIPYPRA---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSERE

Query:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
         HKFRSGHWRSALRDIRELDG + E+ +DS+S   +EQ+SVE+LSHAYKKLDQDY++FLSE GLSK
Subjt:  HHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK

A0A6J1CIZ2 uncharacterized protein LOC111012032 isoform X15.0e-6255.88Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E      G++ TSIL QNGV    
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---

Query:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK
                       K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++K
Subjt:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK

Query:  SEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        SE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  SEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

A0A6J1CK58 uncharacterized protein LOC111012032 isoform X22.0e-6356.51Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E      G++ TSIL QNGV    
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP---

Query:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK
                       K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++K
Subjt:  ---------------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNK

Query:  SEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        SE EHHKFRSGHWRSALRDIRELDG +SES+ D SS   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  SEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

A0A6J1CKQ6 uncharacterized protein LOC111012032 isoform X37.0e-6456.93Show/hide
Query:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP--------
        ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD+ +DQ   KHHF  I+E G++ TSIL QNGV         
Subjt:  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP--------

Query:  ----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREH
                  K QD KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II ASYARV  +S+ K ++KSE EH
Subjt:  ----------KWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREH

Query:  HKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS
        HKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ+SVE+LSHAYKKLD+DY++FLSE GLS
Subjt:  HKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G09970.1 unknown protein2.5e-0524.66Show/hide
Query:  RFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEK----LQSSLNGLGKHNTHFTLA------------------
        RF +Q MS+++   KH  +   +  +SL  IL Q GV   ++ +     + +D    +EK      S ++   K NT   L                   
Subjt:  RFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEK----LQSSLNGLGKHNTHFTLA------------------

Query:  ----CPLLPQARTTSLIV-LVPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRE---LDGFESESTVDSSSALEEEQVSVEE
              +LP   T  L+  L+P++  C   II   +          I+++   + H   S  WR+AL D  E    DG +S S     ++  +E  + +E
Subjt:  ----CPLLPQARTTSLIV-LVPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRE---LDGFESESTVDSSSALEEEQVSVEE

Query:  LSHAYKKLDQDYKRFLSESGLSK
        ++ AY +++ +YKRFL E G+ +
Subjt:  LSHAYKKLDQDYKRFLSESGLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCA
ATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCC
AGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAA
AGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATT
ATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATT
GGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCA
CATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCA
ATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCC
AGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAA
AGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATT
ATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATT
GGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCA
CATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG
Protein sequenceShow/hide protein sequence
MAIANFNSLCDVKLSQRNRAIPQPTFPSLNHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEKLQ
SSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELS
HAYKKLDQDYKRFLSESGLSK