; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018349 (gene) of Chayote v1 genome

Gene IDSed0018349
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:4469518..4470900
RNA-Seq ExpressionSed0018349
SyntenySed0018349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034268.1 hypothetical protein E6C27_scaffold65G002670 [Cucumis melo var. makuwa]1.5e-2367.78Show/hide
Query:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSD-DVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
        MSSR+SQLK     G  SSDDYGGYISDSVL TR+HHKNQ+ HVTFSD + N++ D H+TS+   A FYT DINDEA+EFIRLKH QMS+
Subjt:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSD-DVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
KAG6573703.1 hypothetical protein SDJN03_27590, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2268.54Show/hide
Query:  MSSRDSQLKSYG-HHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSDDVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMS
        MS R SQLKS+  HHGVHSSD+YGGY+SDS+LVTRRH K+ RSHVTFS+D+N+ISD +E SRR      TE+I+D A+EFIRLKH QMS
Subjt:  MSSRDSQLKSYG-HHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSDDVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMS
TrEMBL top hitse value%identityAlignment
A0A0A0KQ47 Uncharacterized protein1.1e-2467.42Show/hide
Query:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSDDVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
        MS R+S+LK    HG HSSDDYGGYISDSVL TR++HKNQ+ HVTFS   N +SD H+TS+ H A FYT+DINDEA+EFIRLK  QMS+
Subjt:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSDDVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
A0A5A7SUE3 Uncharacterized protein7.0e-2467.78Show/hide
Query:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSD-DVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
        MSSR+SQLK     G  SSDDYGGYISDSVL TR+HHKNQ+ HVTFSD + N++ D H+TS+   A FYT DINDEA+EFIRLKH QMS+
Subjt:  MSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSD-DVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGTGACACATTTCATCATATTTGTTTCTCTGGCAGATTGGAAATGTCTTCAAGAGATTCTCAGCTCAAGTCCTATGGCCATCATGGTGTTCATTCTTCAGACGA
CTATGGAGGTTACATTTCTGACTCCGTGCTCGTCACTCGAAGGCACCACAAAAACCAAAGGTCTCACGTAACGTTCAGCGACGACGTCAACGACATATCGGATGCTCACG
AGACTTCTAGACGCCACAGTGCTGATTTCTACACTGAAGACATCAATGATGAGGCTGATGAGTTCATTAGGCTGAAGCACAAACAGATGTCTGTTGGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATTAAAATCATCAGTGACCCTTATCTAAAAAGAAGGTATTGAATTCGAATCTCATCCTTATCGAATAAAACTGTTCTATATATGCACTGTGACACATTTCATCATATTTG
TTTCTCTGGCAGATTGGAAATGTCTTCAAGAGATTCTCAGCTCAAGTCCTATGGCCATCATGGTGTTCATTCTTCAGACGACTATGGAGGTTACATTTCTGACTCCGTGC
TCGTCACTCGAAGGCACCACAAAAACCAAAGGTCTCACGTAACGTTCAGCGACGACGTCAACGACATATCGGATGCTCACGAGACTTCTAGACGCCACAGTGCTGATTTC
TACACTGAAGACATCAATGATGAGGCTGATGAGTTCATTAGGCTGAAGCACAAACAGATGTCTGTTGGCTCTTAAACTGAAAGTAACTGTATCTCCTGGTTCTTTATCAT
TATCATATCAAGTTAATAATGTTCTGATGCTCCAGAGCTCCTTACTCTAAATGTTTTTAAAATGTTTGTAGTTCCTATGTGAACATTTCAAAGTTCCTTTAATAAATACA
GACTGTTTATGTTGTCTTGATTAATTGATTTACAGCCTCTTTTATGATCGCAAATGAATAGAGACTAGCATGGAGAAATATACAAAGAAATCTAAATTTCTTTGGATTTA
ACAAACCTTTGTGTTATATTATTTCATTCTAATTTGTATCATGTTTCAGATTTGTTTAAATCTCTCTCACAGGGTCATGAAGATGACAGGTATTTTGGGACATGAATTTG
CTGTCATTCATATCTAGATGTTGTTTACAAAGAGCATACCATCATTTAATTTACTGCCTGAAATGAGTGGCCAAGGAATATGGGGTCCCAAAAGGGTTGGATCTTTGCCA
TAAGGTTAGGAATTGAAGCAAACCCAGTGGGAATTAAATTGCATCCATAGTTGGTATATCAAATAAATACAAGAAAGACACATGTGGTTCATTGCAGATCCTTCTTCAAG
CTTCCATATAATGAATACAGACAAGTTTCAAATCTTTGTGACAAACAGAAAGTAACAAACATTTGAGACAGATGTACATTTTGGCCATCAAATTTGCCCAGCAGTAAAAG
CATTTCTTGACTGCCCAACTGCTCCAAACCATTTAAAGCTGCTTGCTTTTACTGTTCCCAGTTCTGTGCTTCTTCTTCTTCTTCTTCTATGCTACTTCCCAGCTGCTCTA
AGCAATTTAAAGCTAATTTTTATGACTGTTGTGGCTGTCAGTTGCTCTTAGCCATTTAAGGCTCTGGTTCCTTTGGCTGATTATTAATTTTTACTTCTTGTTCTTTTGTT
TGTAATCCAAAATCAATGAGCCAATAGAATGATAGAAACAGAAAATACTCTCATAGTTCTGTT
Protein sequenceShow/hide protein sequence
MHCDTFHHICFSGRLEMSSRDSQLKSYGHHGVHSSDDYGGYISDSVLVTRRHHKNQRSHVTFSDDVNDISDAHETSRRHSADFYTEDINDEADEFIRLKHKQMSVGS