CuGenDBv2

Gene ID	Sed0018352
Organism	Sechium edule (Chayote v1)
Description	acclimation of photosynthesis to environment
Genome location	LG03:1862122..1868912
RNA-Seq Expression	Sed0018352
Synteny	Sed0018352
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021275 - Protein of unknown function DUF2854

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039379.1 thylakoid membrane protein [Cucumis melo var. makuwa]

3.5e-128

81.63

Show/hide

Query:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE
        MS T ISP+ G    SHHQFT++NR +++SL FSR     SLPG  N   R N  VHFE ++ L K  R +FTFS RAAD+TQPS+VSA+PDK VVTDDE
Subjt:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE

Query:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE CATPILKQVRDDVIR+RYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP
        DEALKRIFQYGLAGGI RRSAPIL+SIREEVTE+GKYCLVLVFEAKALTLS+FE+RQAKF SFFGPGITAEVGK ENDLYEVRLISN+IPGASP
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP

XP_004141498.1 uncharacterized protein LOC101213350 [Cucumis sativus]

2.7e-128

82.31

Show/hide

Query:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE
        MS T ISP+ G   CSH QFT++NR ++VSL FSR     SLPG AN   R N  VHFE  + L K  R +F+FS RAAD+TQPS+VSA+P K VVTDDE
Subjt:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE

Query:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE CATPILKQVRDDVIR+RYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP
        DEALKRIFQYGLAGGI RRSAPILQSIREEVTE+GKYCLVLVFEAKALTLS+FEKRQAKF SFFGPGITAEVGK ENDLYEVRL SNTIPGASP
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP

XP_022956448.1 uncharacterized protein LOC111458174 [Cucurbita moschata]

5.4e-137

87.33

Show/hide

Query:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL
        +GISP   A LCSH +FT+ NR ++VSLRFSR  CA SLPG  N NGR NF VHFEPR+PLQK +R +FTFSARAADTTQPSSVSA+PDK VVTDDEFSL
Subjt:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL

Query:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA
        AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEA
Subjt:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA

Query:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA
        LKRIFQ+GLAGGI RRSAPILQSIREEVTE+GKYCLVLVFEAKALTLS+FEKRQAKF SFFGPGI AEVGK +NDLYEVRLISNTIPGASP+
Subjt:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

XP_022989929.1 uncharacterized protein LOC111486968 [Cucurbita maxima]

5.9e-136

86.64

Show/hide

Query:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL
        +GISP   A LCSH +FT+ NR ++VSLRFSR  CA SLPG  N NGR NF VH EPR+PLQK +R +FTFSARAADTTQPSSVSA+PDK VVTDDEFSL
Subjt:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL

Query:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA
        AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEA
Subjt:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA

Query:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA
        LKRIFQ+GLAGGI RRSAPILQSIREEVTE+GKYCLVL+FEAKALTLS+FEKRQAKF SFFGPGI AEVGK +NDLYEVRLISNTIPGASP+
Subjt:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

XP_023524489.1 uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]

1.2e-136

86.64

Show/hide

Query:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL
        +GISP   A LCSH +FT+ NR ++VSLRFSR  CA SLPG  N NGR NF VHFEPR+PLQK +R +FTFSARAADTTQPSSVSA+PDK VVTDDEFSL
Subjt:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL

Query:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA
        AKVSFGVIGLGVGISLLSYGFGAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRE+CATPILKQVRDDV+RYRYGDEQHLDEA
Subjt:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA

Query:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA
        LKRIFQ+GLAGGI RRSAPILQSIREEVTE+GKYCLVLVFEAKALTLS+FEKRQAKF SFFGPGI AEVGK +NDLYEVRLISNTIPGASP+
Subjt:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX1 Uncharacterized protein

1.3e-128

82.31

Show/hide

Query:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE
        MS T ISP+ G   CSH QFT++NR ++VSL FSR     SLPG AN   R N  VHFE  + L K  R +F+FS RAAD+TQPS+VSA+P K VVTDDE
Subjt:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE

Query:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE CATPILKQVRDDVIR+RYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP
        DEALKRIFQYGLAGGI RRSAPILQSIREEVTE+GKYCLVLVFEAKALTLS+FEKRQAKF SFFGPGITAEVGK ENDLYEVRL SNTIPGASP
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP

A0A1S3CAR1 thylakoid membrane protein slr0575

6.4e-128

81.29

Show/hide

Query:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE
        MS T ISP+ G    SHHQFT++NR +++SL FSR      LPG  N   R N  VHFE ++ L K  R +FTFS RAAD+TQPS+VSA+PDK VVTDDE
Subjt:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE

Query:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE CATPILKQVRDDVIR+RYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP
        DEALKRIFQYGLAGGI RRSAPIL+SIREEVTE+GKYCLVLVFEAKALTLS+FE+RQAKF SFFGPGITAEVGK ENDLYEVRLISN+IPGASP
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP

A0A5A7TDN5 Thylakoid membrane protein

1.7e-128

81.63

Show/hide

Query:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE
        MS T ISP+ G    SHHQFT++NR +++SL FSR     SLPG  N   R N  VHFE ++ L K  R +FTFS RAAD+TQPS+VSA+PDK VVTDDE
Subjt:  MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDE

Query:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE CATPILKQVRDDVIR+RYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP
        DEALKRIFQYGLAGGI RRSAPIL+SIREEVTE+GKYCLVLVFEAKALTLS+FE+RQAKF SFFGPGITAEVGK ENDLYEVRLISN+IPGASP
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASP

A0A6J1GWV5 uncharacterized protein LOC111458174

2.6e-137

87.33

Show/hide

Query:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL
        +GISP   A LCSH +FT+ NR ++VSLRFSR  CA SLPG  N NGR NF VHFEPR+PLQK +R +FTFSARAADTTQPSSVSA+PDK VVTDDEFSL
Subjt:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL

Query:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA
        AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEA
Subjt:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA

Query:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA
        LKRIFQ+GLAGGI RRSAPILQSIREEVTE+GKYCLVLVFEAKALTLS+FEKRQAKF SFFGPGI AEVGK +NDLYEVRLISNTIPGASP+
Subjt:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

A0A6J1JQQ4 uncharacterized protein LOC111486968

2.9e-136

86.64

Show/hide

Query:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL
        +GISP   A LCSH +FT+ NR ++VSLRFSR  CA SLPG  N NGR NF VH EPR+PLQK +R +FTFSARAADTTQPSSVSA+PDK VVTDDEFSL
Subjt:  TGISPSAGAGLCSHHQFTIANRHAVVSLRFSR--CAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSL

Query:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA
        AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEA
Subjt:  AKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEA

Query:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA
        LKRIFQ+GLAGGI RRSAPILQSIREEVTE+GKYCLVL+FEAKALTLS+FEKRQAKF SFFGPGI AEVGK +NDLYEVRLISNTIPGASP+
Subjt:  LKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

SwissProt top hits

e value

%identity

Alignment

Q55403 Thylakoid membrane protein slr0575

6.4e-24

40.86

Show/hide

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL
        L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+P    T  +   LR   ATP   Q+R DV RYRYG E HL
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLREACATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLIS
        DE+L+R+   GL+     R  P+L S+ E+  E GKY L L F +  ++L  ++++Q K   FFGP +   V + E  +  V LIS
Subjt:  DEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLIS

Arabidopsis top hits

e value

%identity

Alignment

AT5G38660.1 acclimation of photosynthesis to environment

3.3e-92

79.72

Show/hide

Query:  RAADTTQPSSVSAAPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREA
        RAAD+T  S   A+ D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y +A KLRE+
Subjt:  RAADTTQPSSVSAAPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREA

Query:  CATPILKQVRDDVIRYRYGDEQHLDEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVE
        CATPIL QVR+DV RYRYGDEQHL+EALKRIFQYGL GGI RRSAPILQ IREEV  +G+YC+VLVFEAKALTLS+FEKRQAKFTSFFGP ITAEVGK E
Subjt:  CATPILKQVRDDVIRYRYGDEQHLDEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVE

Query:  ND-LYEVRLISN
        ++ LYEVRLISN
Subjt:  ND-LYEVRLISN

AT5G38660.2 acclimation of photosynthesis to environment

2.1e-86

80.1

Show/hide

Query:  RAADTTQPSSVSAAPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREA
        RAAD+T  S   A+ D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y +A KLRE+
Subjt:  RAADTTQPSSVSAAPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREA

Query:  CATPILKQVRDDVIRYRYGDEQHLDEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEV
        CATPIL QVR+DV RYRYGDEQHL+EALKRIFQYGL GGI RRSAPILQ IREEV  +G+YC+VLVFEAKALTLS+FEKRQAKFTSFFGP ITAEV
Subjt:  CATPILKQVRDDVIRYRYGDEQHLDEALKRIFQYGLAGGISRRSAPILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGGCCACCGGAATTTCTCCCTCCGCCGGTGCCGGTCTCTGCTCCCACCACCAATTCACCATCGCCAATCGCCACGCCGTCGTCTCTCTGCGTTTCTCTCGTTGCGC
AGCCTCCCTTCCCGGCGCCGCCAATTTGAACGGCAGACCTAACTTTTTGGTCCATTTTGAACCGAGATCTCCTCTGCAGAAGAATCGGCGTTTTTCTTTCACATTCTCGG
CTAGAGCTGCCGATACTACTCAGCCGTCTTCCGTTTCAGCCGCGCCGGACAAACCAGTGGTTACCGATGACGAATTCTCGCTTGCTAAAGTTTCGTTTGGTGTTATTGGC
TTAGGTGTTGGAATATCTTTGCTGTCCTATGGATTTGGTGCATACTTTAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAAT
TATTGGCATGGCTCTAAAGTATGCTGAACTTAAACCGGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAAGCATGCGCCACCCCTATTCTCAAACAGGTAA
GAGATGATGTGATAAGGTACCGTTATGGAGATGAGCAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGGGGAATTTCTCGAAGGAGTGCACCT
ATTTTGCAAAGTATCCGTGAAGAGGTCACAGAAAATGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTCAGAATTTGAGAAAAGACAGGCGAA
ATTTACTTCTTTCTTTGGACCAGGGATCACTGCTGAAGTTGGGAAGGTAGAGAATGATCTGTATGAAGTCCGGCTTATTTCTAACACCATTCCTGGTGCTTCACCAGCCT
AA

mRNA sequence

Show/hide mRNA sequence

GGACACGTAGCGGAAAATGGCGAGTTAGAGAATTACACTCTCGCGTAACCACCAGAGCTTCACCTTCTTCTTCGCCCCTCACAGTTTCAGTCAAATGTCGGCCACCGGAA
TTTCTCCCTCCGCCGGTGCCGGTCTCTGCTCCCACCACCAATTCACCATCGCCAATCGCCACGCCGTCGTCTCTCTGCGTTTCTCTCGTTGCGCAGCCTCCCTTCCCGGC
GCCGCCAATTTGAACGGCAGACCTAACTTTTTGGTCCATTTTGAACCGAGATCTCCTCTGCAGAAGAATCGGCGTTTTTCTTTCACATTCTCGGCTAGAGCTGCCGATAC
TACTCAGCCGTCTTCCGTTTCAGCCGCGCCGGACAAACCAGTGGTTACCGATGACGAATTCTCGCTTGCTAAAGTTTCGTTTGGTGTTATTGGCTTAGGTGTTGGAATAT
CTTTGCTGTCCTATGGATTTGGTGCATACTTTAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTA
AAGTATGCTGAACTTAAACCGGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAAGCATGCGCCACCCCTATTCTCAAACAGGTAAGAGATGATGTGATAAG
GTACCGTTATGGAGATGAGCAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGGGGAATTTCTCGAAGGAGTGCACCTATTTTGCAAAGTATCC
GTGAAGAGGTCACAGAAAATGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTCAGAATTTGAGAAAAGACAGGCGAAATTTACTTCTTTCTTT
GGACCAGGGATCACTGCTGAAGTTGGGAAGGTAGAGAATGATCTGTATGAAGTCCGGCTTATTTCTAACACCATTCCTGGTGCTTCACCAGCCTAAAGTATACGGTTTAA
TCAAGTTCTGCTTCATATAATGATTTCATTTATCATACAAACTGCTGTCCGGTTGTGAAATTCTGGTAAATCCGATCTCTAATGTTTATAAAAAGTGAAATCCAAACAAA
AGATTTGTAAAGAATGAAAAAATATGGCATCCAAATGGTTCCCTTCCTGAATTTAGAATTGCATCTCCAAAAAAACCATGAAGAAGAAGGTGCAAAAACAGTTCAATCTT
AATATAAAAAGAGTAAAACTCTCCTACACATAGTGTGTAG

Protein sequence

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MSATGISPSAGAGLCSHHQFTIANRHAVVSLRFSRCAASLPGAANLNGRPNFLVHFEPRSPLQKNRRFSFTFSARAADTTQPSSVSAAPDKPVVTDDEFSLAKVSFGVIG
LGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLREACATPILKQVRDDVIRYRYGDEQHLDEALKRIFQYGLAGGISRRSAP
ILQSIREEVTENGKYCLVLVFEAKALTLSEFEKRQAKFTSFFGPGITAEVGKVENDLYEVRLISNTIPGASPA

Sed0018352 (gene) of Chayote v1 genome