; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018371 (gene) of Chayote v1 genome

Gene IDSed0018371
OrganismSechium edule (Chayote v1)
DescriptionLysM domain-containing protein
Genome locationLG07:4581077..4584081
RNA-Seq ExpressionSed0018371
SyntenySed0018371
Gene Ontology termsNA
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014272.1 LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-7353.14Show/hide
Query:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ
        Q  M ID     D+SSIS+ S VGYI+HPVSK+DTL GIAIKYGVEVSDIKRMNALVTDHQMFALKSL IPTPGK PS  LS+DLDIS R SNC++N+ +
Subjt:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ

Query:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDS
         M  NL  SFQSLRIK + L AP++A                                 + SH      HRKSRSFA+GF FEN+EFTDI+ A  GA DS
Subjt:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDS

Query:  TKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTCNLV
        TKGSEKLVRRRQKSMADFS+A +        SNGEC SMT K +DV                  +K+TPIL D+VG      SNG + GGRRS+STCNL 
Subjt:  TKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTCNLV

Query:  EAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD
        + EK +S+                 S+A VTKSIF+GLP+ T RYKAS D
Subjt:  EAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD

XP_004136134.1 uncharacterized protein LOC101214539 [Cucumis sativus]1.5e-7453.85Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+SSIS  S +GYI+HPVS+FDTL GIAIKYGVEVSDIK+MNALVTD QMFALKSL IPTPG+HPS  LSEDLDIS RKSN +Q++ +L   NL  SF 
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQASL----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA
        SLRI+PS L  P Q                                     SHHRKSRSFANGFP ENIEFTDI+ A NGA DS KGSEKL RRRQKSMA
Subjt:  SLRIKPSPLNAPTQASL----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA

Query:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------
        DFS ATES         NGECLSMT + +D+                   +K+TP L D++G   S   NG+ GGRRS+STCNL EA+K +++       
Subjt:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------

Query:  -----------FSSARVTKSIFEGLPKP-TARYKASRD
                   FSSA VTKSIFEGLP+  + RYKASRD
Subjt:  -----------FSSARVTKSIFEGLPKP-TARYKASRD

XP_008461364.1 PREDICTED: uncharacterized protein LOC103499969 [Cucumis melo]1.8e-7555.79Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+ SIS+ S VGYI+HPVSKFDTL GIAIKYGVEVSDIK+MNALVTD QMFALKSL IPTPGKHPS  LSEDLDIS RKSNC+Q+S +L   +L  SFQ
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA
        SLRIK S L  P Q                             + SH      HRKSRSFANGF  ENIEFTDI+ A NGATDS KG EKL RRRQKSMA
Subjt:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA

Query:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------
        DFS ATES         NGECLSMT + +D+                   +K+TP L D+VG   SF SN + GGRRS+STCNL EA+K +S+       
Subjt:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------

Query:  ----------FSSARVTKSIFEGLPKP-TARYKASRD
                  FSSA VTKSIFEGLP+  + RYKASRD
Subjt:  ----------FSSARVTKSIFEGLPKP-TARYKASRD

XP_023548136.1 uncharacterized protein LOC111806863 [Cucurbita pepo subsp. pepo]5.2e-7554.73Show/hide
Query:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ
        Q  M ID     D+SSIS+ S VGYI+HPVSK+DTL GIAIKYGVEVSDIKRMNALVTDHQMFALKSL IPTPGK PS  LS+DLDIS R SNC++N+ +
Subjt:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ

Query:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------SLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQ
         M  NL  SFQSLRIK + L AP++A                             + HRKSRSFANGF FEN+EFTDI+ A  GA DSTKGSEKLVRRRQ
Subjt:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------SLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQ

Query:  KSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTCNLVEAEKKSST----
        KSMADFS+A +        SNGEC SMT K +DV                  +K+TPI  DNVG      SNG + GGRRS+STCNL + EK +S+    
Subjt:  KSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTCNLVEAEKKSST----

Query:  ------------FSSARVTKSIFEGLPKPTARYKASRD
                     S+A VTKSIF+GLP+ T RYKAS D
Subjt:  ------------FSSARVTKSIFEGLPKPTARYKASRD

XP_038899497.1 uncharacterized protein LOC120086775 [Benincasa hispida]1.3e-7354.14Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+SSIS+ S VGYI+HPVSKFDTL GIAIKYGVEVSDIKRMNALVTDHQMFALKSL IPTPGKHPS  LSEDLDI  RKSNC+Q+S +L+  NL  SFQ
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQASL-----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSM
        SLR+K S L  P QA+                                      HRKSRSFANGFPFEN+EFTD++ A NG TDS KG EK VRRRQKSM
Subjt:  SLRIKPSPLNAPTQASL-----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSM

Query:  ADFSVATES---------NGECLSMTGKVVDVG-------------------NKMTPILMDNV-GDSFTSNGVFGGRRSASTCNLVEAEKKSST------
        ADFS ATES         NG+CLS+T K ++V                    +K+TP L D++ GDSF        RRS+STCNL E EK +S+      
Subjt:  ADFSVATES---------NGECLSMTGKVVDVG-------------------NKMTPILMDNV-GDSFTSNGVFGGRRSASTCNLVEAEKKSST------

Query:  -----------FSSARVTKSIFEGLPKP-TARYKASRD
                    SSA+VTKSIFEGLPKP + RYKAS D
Subjt:  -----------FSSARVTKSIFEGLPKP-TARYKASRD

TrEMBL top hitse value%identityAlignment
A0A0A0KBC9 LysM domain-containing protein7.4e-7553.85Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+SSIS  S +GYI+HPVS+FDTL GIAIKYGVEVSDIK+MNALVTD QMFALKSL IPTPG+HPS  LSEDLDIS RKSN +Q++ +L   NL  SF 
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQASL----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA
        SLRI+PS L  P Q                                     SHHRKSRSFANGFP ENIEFTDI+ A NGA DS KGSEKL RRRQKSMA
Subjt:  SLRIKPSPLNAPTQASL----------------------------------SHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA

Query:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------
        DFS ATES         NGECLSMT + +D+                   +K+TP L D++G   S   NG+ GGRRS+STCNL EA+K +++       
Subjt:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------

Query:  -----------FSSARVTKSIFEGLPKP-TARYKASRD
                   FSSA VTKSIFEGLP+  + RYKASRD
Subjt:  -----------FSSARVTKSIFEGLPKP-TARYKASRD

A0A1S3CEJ2 uncharacterized protein LOC1034999698.7e-7655.79Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+ SIS+ S VGYI+HPVSKFDTL GIAIKYGVEVSDIK+MNALVTD QMFALKSL IPTPGKHPS  LSEDLDIS RKSNC+Q+S +L   +L  SFQ
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA
        SLRIK S L  P Q                             + SH      HRKSRSFANGF  ENIEFTDI+ A NGATDS KG EKL RRRQKSMA
Subjt:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA

Query:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------
        DFS ATES         NGECLSMT + +D+                   +K+TP L D+VG   SF SN + GGRRS+STCNL EA+K +S+       
Subjt:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------

Query:  ----------FSSARVTKSIFEGLPKP-TARYKASRD
                  FSSA VTKSIFEGLP+  + RYKASRD
Subjt:  ----------FSSARVTKSIFEGLPKP-TARYKASRD

A0A5D3CFU3 Peptidoglycan-binding LysM domain-containing protein, putative isoform 18.7e-7655.79Show/hide
Query:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ
        +D+ SIS+ S VGYI+HPVSKFDTL GIAIKYGVEVSDIK+MNALVTD QMFALKSL IPTPGKHPS  LSEDLDIS RKSNC+Q+S +L   +L  SFQ
Subjt:  DDMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQ

Query:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA
        SLRIK S L  P Q                             + SH      HRKSRSFANGF  ENIEFTDI+ A NGATDS KG EKL RRRQKSMA
Subjt:  SLRIKPSPLNAPTQ----------------------------ASLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMA

Query:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------
        DFS ATES         NGECLSMT + +D+                   +K+TP L D+VG   SF SN + GGRRS+STCNL EA+K +S+       
Subjt:  DFSVATES---------NGECLSMTGKVVDVG------------------NKMTPILMDNVG--DSFTSNGVFGGRRSASTCNLVEAEKKSST-------

Query:  ----------FSSARVTKSIFEGLPKP-TARYKASRD
                  FSSA VTKSIFEGLP+  + RYKASRD
Subjt:  ----------FSSARVTKSIFEGLPKP-TARYKASRD

A0A6J1GPY6 uncharacterized protein LOC1114564052.0e-7252.41Show/hide
Query:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ
        Q  M ID     D+SSIS+ S VG+I+HPVSK+DTL GIAIKYGVEVSDIKRMN+LVTDHQMFALKSL IPTPGK PS  LS+DLDIS R SNC++N+ +
Subjt:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ

Query:  LMPNNLFGSFQSLRIKPSPLNAPTQA----------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAA--NGA
         M  NL  SFQSLRIK + L AP++A                                  + SH      HRKSRSFANGF FEN+EFTDI+ A+  +GA
Subjt:  LMPNNLFGSFQSLRIKPSPLNAPTQA----------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAA--NGA

Query:  TDSTKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTC
         DSTKGSEKLVRRRQKSMADFS+A +        SNGEC SMT K +DV                  +K+TPIL D+VG      SNG + GGRRS+STC
Subjt:  TDSTKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNVGDS--FTSNG-VFGGRRSASTC

Query:  NLVEAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD
        NL + EK +S+                 S+A VTKSIF+GLP+ T RYKAS D
Subjt:  NLVEAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD

A0A6J1JQV7 uncharacterized protein LOC111488087 isoform X11.0e-7152.71Show/hide
Query:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ
        Q  M ID     D+SSIS+ S VG+I+HPVSK+DTL GIAIKYGVEVSDIKRMNALVTDHQMFALKSL IPTPGK PS   S+DLDIS R SNC++N+ +
Subjt:  QYRMGID-----DMSSISI-SDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQ

Query:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDS
         M  NL  SFQSLRIK + L AP++A                                 + SH      HRKSRSFA+GF FEN+EFTDI+ A  GA DS
Subjt:  LMPNNLFGSFQSLRIKPSPLNAPTQA---------------------------------SLSH------HRKSRSFANGFPFENIEFTDIMPAANGATDS

Query:  TKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNV-GDSF--TSNG-VFGGRRSASTCNL
        TKGSEKLVRRRQKSMADFS+A +        SNGE  SMT K +DV                  +K+TPIL D+V G SF  +SNG + GGRRS+STCNL
Subjt:  TKGSEKLVRRRQKSMADFSVATE--------SNGECLSMTGKVVDVG-----------------NKMTPILMDNV-GDSF--TSNG-VFGGRRSASTCNL

Query:  VEAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD
         + EK +S+                 S+A VTKSIF+GLP+ T RYKAS D
Subjt:  VEAEKKSST----------------FSSARVTKSIFEGLPKPTARYKASRD

SwissProt top hitse value%identityAlignment
A0JNI1 LysM and putative peptidoglycan-binding domain-containing protein 12.7e-0547.83Show/hide
Query:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP
        ++H ++  DTL G+A+KYGV +  IKR N L T+  +F  K+LHIP
Subjt:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP

Q1JQA8 LysM and putative peptidoglycan-binding domain-containing protein 24.5e-0545.28Show/hide
Query:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHP
        +++H V   DTL GIA+KYGV +  IKR N L T+  +F  K+L+IP   + P
Subjt:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHP

Q3B7I8 LysM and putative peptidoglycan-binding domain-containing protein 22.0e-0550Show/hide
Query:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPS
        YI+H +S  DTL GIA+KYGV +  IKR N L +   +F  KSL+IP   K  S
Subjt:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPS

Q3KPL3 LysM and putative peptidoglycan-binding domain-containing protein 22.7e-0550Show/hide
Query:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPS
        YI+H +S  DTL GIA+KYGV +  IKR N L +   +F  KSL+IP   K  S
Subjt:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPS

Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 25.9e-0545.28Show/hide
Query:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHP
        +++H V   DTL GIA+KYGV +  IKR N L T+  +F  K+L+IP   + P
Subjt:  YIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHP

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein1.0e-0439.13Show/hide
Query:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP
        I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Subjt:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein1.0e-0439.13Show/hide
Query:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP
        I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Subjt:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein1.0e-0439.13Show/hide
Query:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP
        I H + + D++  +A+KY V+V DIKR+N +++DH +++   L IP
Subjt:  IDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIP

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein5.7e-2734.55Show/hide
Query:  DVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKH-PSTCLSE-DLDISRRKSNCDQNSIQLMPNNLFGSFQSLRIKPSP
        D GYI+H +SKFDTL G+AIKYGVEV+D+K+MN LVTD QMFALKSL IP PG+H PS CLS   L+     S  +  S       +F SFQSLR+K S 
Subjt:  DVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKH-PSTCLSE-DLDISRRKSNCDQNSIQLMPNNLFGSFQSLRIKPSP

Query:  LNA----------------------------------------------------PTQASLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEK
                                                                T   L+HHRKSRS  N    E  +  D     N   + T  S+K
Subjt:  LNA----------------------------------------------------PTQASLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEK

Query:  LVRRRQKSMADFSVAT----------ESNGECLSMTGKVVDVGNK---------------MTPILMDNVGDSFTSNGVFGGRRSASTCNLVEAEKKSSTF
         +RRRQKS ADFS  T           SNG  LS+ GK + + +K                 P+ M N+ D+  S+     R+S+S  +L + +  S+  
Subjt:  LVRRRQKSMADFSVAT----------ESNGECLSMTGKVVDVGNK---------------MTPILMDNVGDSFTSNGVFGGRRSASTCNLVEAEKKSSTF

Query:  S
        S
Subjt:  S

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.2e-2440.48Show/hide
Query:  GYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKH-PSTCLSEDL-----DISRRKSNCDQNSIQLMPNNLFGSFQSLRIKP
        GYI+H VSKFDTL GIAIKYGVEV+DI ++N LVTD QMFAL+SL IP PG+H PS CLS        D S + S+   N       ++F SFQSLR+  
Subjt:  GYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKH-PSTCLSEDL-----DISRRKSNCDQNSIQLMPNNLFGSFQSLRIKP

Query:  S------------------PLN-----------------------------APTQASLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVR
        S                  P N                               T   LSHHRKSRS  +    E  +  +   A  G  +ST   +K +R
Subjt:  S------------------PLN-----------------------------APTQASLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVR

Query:  RRQKSMADFS
        RRQKS ADFS
Subjt:  RRQKSMADFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTATAGGATGGGGATCGATGATATGAGCTCGATTTCAATTTCTGATGTCGGCTACATTGATCATCCTGTTTCCAAGTTCGATACTCTTGTCGGGATCGCCATCAA
GTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAATGCATTAGTGACGGACCATCAAATGTTTGCTCTCAAATCTCTACATATCCCAACTCCTGGAAAGCACCCTTCTA
CTTGCTTATCCGAAGATCTTGACATTTCCAGGAGGAAGAGTAACTGTGACCAAAATTCAATTCAGCTCATGCCCAACAATCTGTTTGGCTCATTCCAATCACTCAGAATC
AAACCCTCCCCACTCAATGCACCCACGCAGGCCAGTCTAAGCCACCATAGAAAATCAAGAAGCTTTGCAAATGGATTTCCTTTCGAAAATATTGAATTCACTGATATCAT
GCCCGCTGCAAACGGAGCAACCGATTCCACAAAAGGGAGTGAAAAGCTGGTCAGGAGACGCCAAAAATCGATGGCGGACTTCTCGGTTGCAACGGAAAGCAATGGCGAAT
GTTTGTCAATGACAGGGAAAGTTGTAGACGTGGGTAACAAAATGACACCCATTTTAATGGATAATGTGGGAGATTCGTTTACGAGTAATGGGGTGTTTGGTGGGAGAAGA
TCAGCAAGCACATGTAATTTGGTAGAGGCTGAAAAAAAGAGTTCCACATTCTCATCTGCAAGGGTCACCAAGTCTATTTTTGAAGGGTTGCCCAAGCCAACTGCAAGGTA
TAAAGCATCAAGAGATTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAATGAGAAGAGAACAGGATGCAGTATAGGATGGGGATCGATGATATGAGCTCGATTTCAATTTCTGATGTCGGCTACATTGATCATCCTGTTTCCAAGTTCGATAC
TCTTGTCGGGATCGCCATCAAGTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAATGCATTAGTGACGGACCATCAAATGTTTGCTCTCAAATCTCTACATATCCCAA
CTCCTGGAAAGCACCCTTCTACTTGCTTATCCGAAGATCTTGACATTTCCAGGAGGAAGAGTAACTGTGACCAAAATTCAATTCAGCTCATGCCCAACAATCTGTTTGGC
TCATTCCAATCACTCAGAATCAAACCCTCCCCACTCAATGCACCCACGCAGGCCAGTCTAAGCCACCATAGAAAATCAAGAAGCTTTGCAAATGGATTTCCTTTCGAAAA
TATTGAATTCACTGATATCATGCCCGCTGCAAACGGAGCAACCGATTCCACAAAAGGGAGTGAAAAGCTGGTCAGGAGACGCCAAAAATCGATGGCGGACTTCTCGGTTG
CAACGGAAAGCAATGGCGAATGTTTGTCAATGACAGGGAAAGTTGTAGACGTGGGTAACAAAATGACACCCATTTTAATGGATAATGTGGGAGATTCGTTTACGAGTAAT
GGGGTGTTTGGTGGGAGAAGATCAGCAAGCACATGTAATTTGGTAGAGGCTGAAAAAAAGAGTTCCACATTCTCATCTGCAAGGGTCACCAAGTCTATTTTTGAAGGGTT
GCCCAAGCCAACTGCAAGGTATAAAGCATCAAGAGATTGATCCATTAGTTTTAAGGGTTTATTTACAGATCCATCCAATCCAAAATTTGTGATCAAACCTTGTTCATTGG
AGATTTTGAATTTAAAAAATCCCATAGTTGCATAGTTTTA
Protein sequenceShow/hide protein sequence
MQYRMGIDDMSSISISDVGYIDHPVSKFDTLVGIAIKYGVEVSDIKRMNALVTDHQMFALKSLHIPTPGKHPSTCLSEDLDISRRKSNCDQNSIQLMPNNLFGSFQSLRI
KPSPLNAPTQASLSHHRKSRSFANGFPFENIEFTDIMPAANGATDSTKGSEKLVRRRQKSMADFSVATESNGECLSMTGKVVDVGNKMTPILMDNVGDSFTSNGVFGGRR
SASTCNLVEAEKKSSTFSSARVTKSIFEGLPKPTARYKASRD