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Sed0018387 (gene) of Chayote v1 genome

Gene IDSed0018387
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1526579..1527705
RNA-Seq ExpressionSed0018387
SyntenySed0018387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0646.75Show/hide
Query:  MASITPLGSW-KIVFFALLLLASDVFARDIVRADLMARASRELKIVMNG-MKGRRLIARKLDGVWRGNYLIPPPLPP
        MAS T L +W K+ F   LL+A  V AR++  A+++ R +RE+  + NG + G RLIAR+LD  WRG+Y  PPP  P
Subjt:  MASITPLGSW-KIVFFALLLLASDVFARDIVRADLMARASRELKIVMNG-MKGRRLIARKLDGVWRGNYLIPPPLPP

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0752.63Show/hide
Query:  MASITPLGSWK-IVFFALLLLASDVFARDIVRADLMARASRELKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPP
        MAS +    WK +VFFALLLLA +V AR++V  +++AR   E+ I  N   GRRLIAR+LD  W GNY  PPP  P
Subjt:  MASITPLGSWK-IVFFALLLLASDVFARDIVRADLMARASRELKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPP

KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0646.75Show/hide
Query:  MASITPLGSW-KIVFFALLLLASDVFARDIVRADLMARASRELKIVMNG-MKGRRLIARKLDGVWRGNYLIPPPLPP
        MAS T L +W K+ F   LL+A  V AR++  A+++ R +RE+  + NG + G RLIAR+LD  WRG+Y  PPP  P
Subjt:  MASITPLGSW-KIVFFALLLLASDVFARDIVRADLMARASRELKIVMNG-MKGRRLIARKLDGVWRGNYLIPPPLPP

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-0753.42Show/hide
Query:  MASITPLGSWK-IVFFALLLLASDVFARDIVRADLMARASRELKIVMNGMKGRRLIARKLDGVWRGNYLIPPP
        MAS +    WK +VFFALLLLA +V AR++V  +++AR   E+ I  N   GRRLIAR+LD  W GNY  PPP
Subjt:  MASITPLGSWK-IVFFALLLLASDVFARDIVRADLMARASRELKIVMNGMKGRRLIARKLDGVWRGNYLIPPP

KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]7.1e-0449.32Show/hide
Query:  SWK--IVFFALLLLASDVFARDIVRADLMARASRE--LKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPPSS
        +WK  I+FF LLLLA ++ AR++V     AR + E  L   MN +  RRL  R+LD  WRGNY  PPP PP S
Subjt:  SWK--IVFFALLLLASDVFARDIVRADLMARASRE--LKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein3.5e-0449.32Show/hide
Query:  SWK--IVFFALLLLASDVFARDIVRADLMARASRE--LKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPPSS
        +WK  I+FF LLLLA ++ AR++V     AR + E  L   MN +  RRL  R+LD  WRGNY  PPP PP S
Subjt:  SWK--IVFFALLLLASDVFARDIVRADLMARASRE--LKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTACACCTTTAGGTTCTTGGAAGATTGTCTTCTTTGCTTTGCTTCTTCTTGCTTCCGATGTTTTTGCGAGGGACATCGTTCGGGCCGACCTAATGGCTCG
AGCATCCCGTGAGCTGAAGATAGTGATGAATGGAATGAAGGGCAGAAGATTAATTGCTCGAAAGTTAGATGGGGTTTGGAGGGGAAACTATTTAATCCCTCCTCCTCTTC
CTCCCTCTTCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTACACCTTTAGGTTCTTGGAAGATTGTCTTCTTTGCTTTGCTTCTTCTTGCTTCCGATGTTTTTGCGAGGGACATCGTTCGGGCCGACCTAATGGCTCG
AGCATCCCGTGAGCTGAAGATAGTGATGAATGGAATGAAGGGCAGAAGATTAATTGCTCGAAAGTTAGATGGGGTTTGGAGGGGAAACTATTTAATCCCTCCTCCTCTTC
CTCCCTCTTCTGGTTAA
Protein sequenceShow/hide protein sequence
MASITPLGSWKIVFFALLLLASDVFARDIVRADLMARASRELKIVMNGMKGRRLIARKLDGVWRGNYLIPPPLPPSSG