; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018394 (gene) of Chayote v1 genome

Gene IDSed0018394
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG11:363337..364230
RNA-Seq ExpressionSed0018394
SyntenySed0018394
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]3.3e-9463.19Show/hide
Query:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD
        ++NR R R R P I+EVW SN+  EI  L   LQ   ILSIDTEFPGCIRSTP G+I+E++YEDLRFNV QTKLIQLG+TAS+E G+V GSWEFNFSDFD
Subjt:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD

Query:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC
         ++D  NP SISFL+QNG+DF KLKK G+PL  FT++F  ++R++ + KW+TFHGLYDIGYL+KAMG    LPES+EEFA MVA  VGVVRDLK + R+C
Subjt:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC

Query:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL-HSQYHQFVTPYGTVMFGQFPISL
        +GLE  RVGLERL EL+GEKRFGMKHHAGSDS+LTA VH KM   + L+S   DG+L+G+ N+L H + +Q      T+MFGQ   SL
Subjt:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL-HSQYHQFVTPYGTVMFGQFPISL

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.6e-9165.15Show/hide
Query:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD
        ++NR R R R P I+EVW SN+  EI  L   LQ   ILSIDTEFPGCIRSTP G+I+E++YEDLRFNV QTKLIQLG+TAS+E G+V GSWEFNFSDFD
Subjt:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD

Query:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC
         ++D  NP SI+FL+QNG+DF KLKK G+PL  FT++F  ++R++ + KW+TFHGLYDIGYL+KAMG    LPES+EEFA MVA  VGVVRDLK + R+C
Subjt:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC

Query:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL
        +GLE  RVGLERL EL+GEKRFGMKHHAGSDS+LTA VH KM   + L+S   DG+L+G+ N+L
Subjt:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL

XP_023533171.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.6e-8865.38Show/hide
Query:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD
        ++NR R R R P I+EVW SN+  EI  L   LQ   ILSIDTEFPGCIRSTP G+I+E++YEDLRFNV QTKLIQLG+TAS+E G+V GSWEFNFSDFD
Subjt:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD

Query:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC
         ++D  NP SISFL+QNG+DF KLKK G+PL  FT+ F  ++R++ + KW+TFHGLYDIGYL+KAMG    LPES+EEFA MVA  VGVVRDLK + R+C
Subjt:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC

Query:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDS----SICDGY
        +GLE  +VGLERL EL+GEKRFGMKHHAGSDS+LTA VH KM    GL+S    +IC G+
Subjt:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDS----SICDGY

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]7.2e-8957.89Show/hide
Query:  QNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDS
        +N+ RS   +P IR+VW SN+ SEI+   + L+ + IL+IDTEFPG I  +PRG+I+++LY+D  FNV QTKLIQLG+TAS++ G++GGSWEFNFSDFD 
Subjt:  QNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDS

Query:  ELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCD
        E DAH+P++I FL+ NG+D +K+KKDG+P+  FT  F+ +LRK  I +W+TFHGLYDIGYL+KAMG +  LP+S+EEFA +V NEVG+VRDLK+M +FC+
Subjt:  ELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCD

Query:  GLED--RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS
        GL+D  R+GLERL +L+  KRFGMKH+AGSDS+LTA  H +M+  +G++S +C+G+L+G S  L S
Subjt:  GLED--RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]2.2e-9056.06Show/hide
Query:  SRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAH
        +R R+  I +VW SN+ +EIS L + L+ + I+SIDTEFPG IR++P G+I+E LYED RFNV QTKLIQLG+TA ++ G++GGSWEFNFSDFD E+DA 
Subjt:  SRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAH

Query:  NPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLED-
        +P S SFL+QNG+DF KLKK G+P+  FT  FVH++RK+++ +W+TFHGLYDIGYL+KAMG    LPE++EEFA +V   +G+VRDLK+M RFC+GLED 
Subjt:  NPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLED-

Query:  RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS------QYHQFVTPYGTVMFGQFPISLPI
        ++GLERL +L+ +KR+G+KH+AGSDS+LTA  H +MI  + +D+ ICDGYL+G SN+L S       +H+ +     + FGQ P ++P+
Subjt:  RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS------QYHQFVTPYGTVMFGQFPISLPI

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease3.5e-8957.89Show/hide
Query:  QNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDS
        +N+ RS   +P IR+VW SN+ SEI+   + L+ + IL+IDTEFPG I  +PRG+I+++LY+D  FNV QTKLIQLG+TAS++ G++GGSWEFNFSDFD 
Subjt:  QNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDS

Query:  ELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCD
        E DAH+P++I FL+ NG+D +K+KKDG+P+  FT  F+ +LRK  I +W+TFHGLYDIGYL+KAMG +  LP+S+EEFA +V NEVG+VRDLK+M +FC+
Subjt:  ELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCD

Query:  GLED--RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS
        GL+D  R+GLERL +L+  KRFGMKH+AGSDS+LTA  H +M+  +G++S +C+G+L+G S  L S
Subjt:  GLED--RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHS

A0A5A7TRG1 Poly(A)-specific ribonuclease2.3e-8854.58Show/hide
Query:  QNRLRS-RARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD
        +N+ RS R+++P+IR+VW SN+ SEI+   + L+ + IL+IDTEFPG I  +PR +I+E++Y++ RFNV Q KLIQLG+TASN+FG++GGSWEFNFSDFD
Subjt:  QNRLRS-RARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD

Query:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFC
         ++D+H+P +I FL++NG+DF+KLKK G+P+  FT  F+ +++K  I +W+TFHGLYDIGYL+KAMG +  LP+S+EEFA +V NEVG+VRDLK+M RFC
Subjt:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFC

Query:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHSQYHQFVTPYGTVMFGQFP
        +GLED R+GLERL +++ +KRFGMKH+AGSDS+LTA  H +M+  +G+   +C+G+L+G S  L S     +  +  +  GQ P
Subjt:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHSQYHQFVTPYGTVMFGQFP

A0A6J1CXP9 Poly(A)-specific ribonuclease9.5e-8756.34Show/hide
Query:  RLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSEL
        R  SR     IREVW  N+  E++ L D L  Y IL+IDTEFPG IRSTP GAIEE+LY+D RFNV +TKLIQLG+TAS+E G +G +WEFNFSDFD ++
Subjt:  RLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSEL

Query:  DAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCDGL
        D HN  S+SFLKQNG+DF+KLK+ G+P+  FT     + RK+ I +W+TFHGLYDIGYLLKAMG    +PES+EEFA +V   +G V DLK+M +FC+GL
Subjt:  DAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVW-LPESLEEFAGMVANEVGVVRDLKYMIRFCDGL

Query:  ED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHSQYHQFVTPYGTVMFGQFPISL
        ED ++GLE+L++L+ +KRFG KHHAGSDS+LTA ++ KM   + L S +CDG+L+G+  +LH++    +  Y  +MFGQ P  L
Subjt:  ED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHSQYHQFVTPYGTVMFGQFPISL

A0A6J1G7L2 Poly(A)-specific ribonuclease7.5e-9265.15Show/hide
Query:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD
        ++NR R R R P I+EVW SN+  EI  L   LQ   ILSIDTEFPGCIRSTP G+I+E++YEDLRFNV QTKLIQLG+TAS+E G+V GSWEFNFSDFD
Subjt:  KQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFD

Query:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC
         ++D  NP SI+FL+QNG+DF KLKK G+PL  FT++F  ++R++ + KW+TFHGLYDIGYL+KAMG    LPES+EEFA MVA  VGVVRDLK + R+C
Subjt:  SELDAHNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFC

Query:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL
        +GLE  RVGLERL EL+GEKRFGMKHHAGSDS+LTA VH KM   + L+S   DG+L+G+ N+L
Subjt:  DGLED-RVGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRL

A0A6J1I4S7 Poly(A)-specific ribonuclease1.2e-8459.77Show/hide
Query:  RARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHN
        R   P I EVW  N   EI  L   L  Y ++SIDTEFPGCI+ TP G I+E+LY D RFNV QTK+IQLGVT S+E G++GG+WEFNFSDFD E+DAHN
Subjt:  RARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHN

Query:  PWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLE-DR
        P SI FLKQNG+DF KLKKDG+ +R+F + F++ +RK+ I +WITFHGLYDIGYL+ A+G V  LPE+L EF  +VA  VG VRDLK+M RFC+GLE   
Subjt:  PWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFV-WLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLE-DR

Query:  VGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNR
        +GLE+L +L+ +KRFG+KHHAGSDS++TA +H KM+  Y  ++ ICDG+L+G+S +
Subjt:  VGLERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNR

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 55.8e-4944.1Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGE-VGGSWEFNFSDFDSELDAHNPWSISFL
        EVW  N  +E++ + D L+H   ++IDTEFPGC++ TP  A +E  Y D++FNV  T LIQLG+T    FG+ +  +WE N SDF+      N  SI+FL
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGE-VGGSWEFNFSDFDSELDAHNPWSISFL

Query:  KQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNH-ICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
        K NG+D +K++++G+ +  F M+F  +L + H   +W+TF G YD  YLLK +    LPE+ +EF   V   +G  V D+K M   C GL  R GL+R++
Subjt:  KQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNH-ICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKMI
        +++  +R G  HHAGSDS LTARV TK+I
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKMI

Q9C6M9 Putative CCR4-associated factor 1 homolog 42.3e-4543.42Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK
        EVW  N   E+  + D L+H+  ++IDTEFPGC++ TP  A EE  Y D++FNV  T LIQLG T  +  G +  +WE N SDF+      N  SI+FLK
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK

Query:  QNGIDFEKLKKDGVPLRRFTMDFVHVLR-KNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
         NG++ +K+ ++G+ +  F  DF  +L+ K+    W+ F G YD  YL+K + G   LPE+ EEF   V   +G  V D+K +   C GL  R GL+R++
Subjt:  QNGIDFEKLKKDGVPLRRFTMDFVHVLR-KNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKM
        +++  KR G  HHAGSDS LTARV TK+
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 85.4e-4743.69Show/hide
Query:  ISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLKQNGIDFEKLK
        +SL+ D L+ Y+ ++IDTEFP  +R T + A +E+ Y D+ F+V + KLIQLG+T  +  G +GG+WE NFSDF  + DA N  SI FL++NG+D  K++
Subjt:  ISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLKQNGIDFEKLK

Query:  KDGVPLRRFTMDFVHVLRK-NHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGLERLSELVGEKRFGMKH
        ++G+ +  F  +   +L+K      W+TFHG YDI YLLK      LP + E F+  VA  +G V DLK M   C+GL  R+GLE L+   G  R G  H
Subjt:  KDGVPLRRFTMDFVHVLRK-NHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGLERLSELVGEKRFGMKH

Query:  HAGSDSMLTARVHTKMITSYGL
        HAGS++ LTA V  K+++ + L
Subjt:  HAGSDSMLTARVHTKMITSYGL

Q9SFX6 Putative CCR4-associated factor 1 homolog 38.7e-4543.42Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK
        EVW  N   E++ + D L+H   ++IDTEFPGC++ TP  A EE  Y D++FNV  T LIQLG T  +  G    +WE N SDFD      N  SI+FLK
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK

Query:  QNGIDFEKLKKDGVPLRRFTMDFVHVL-RKNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
         NG++ +K++++G+ +  F  DF  +L  K+    W+ F G YD  YL+K + G   LPE+ EEF   V   +G  V D+K +   C GL  + GL+R++
Subjt:  QNGIDFEKLKKDGVPLRRFTMDFVHVL-RKNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKM
        +++  KR G  HHAGSDS LTARV TK+
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 18.7e-4538.8Show/hide
Query:  QPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWS
        QP  R VW SN   E++ + + L+ + +++ DTE+PG I  T   +  ++ Y  ++ NV  TKLIQ G T  N  GE+GG WE NFS+F    D  N  S
Subjt:  QPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWS

Query:  ISFLKQNGIDFEKLKKDGVPL--RRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGL
        I FL+++G+D +K++ +GV +    F    + V R     +++TF G YD  Y L  +    LPE+  EFA  V    G V D K M  FC+GL + +GL
Subjt:  ISFLKQNGIDFEKLKKDGVPL--RRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGL

Query:  ERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGI
         +L++L+   R G  HHAGSDS++TA V  K+   Y  DS    G ++GI
Subjt:  ERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGI

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-4638.8Show/hide
Query:  QPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWS
        QP  R VW SN   E++ + + L+ + +++ DTE+PG I  T   +  ++ Y  ++ NV  TKLIQ G T  N  GE+GG WE NFS+F    D  N  S
Subjt:  QPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWS

Query:  ISFLKQNGIDFEKLKKDGVPL--RRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGL
        I FL+++G+D +K++ +GV +    F    + V R     +++TF G YD  Y L  +    LPE+  EFA  V    G V D K M  FC+GL + +GL
Subjt:  ISFLKQNGIDFEKLKKDGVPL--RRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGL

Query:  ERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGI
         +L++L+   R G  HHAGSDS++TA V  K+   Y  DS    G ++GI
Subjt:  ERLSELVGEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGI

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-4643.42Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK
        EVW  N   E++ + D L+H   ++IDTEFPGC++ TP  A EE  Y D++FNV  T LIQLG T  +  G    +WE N SDFD      N  SI+FLK
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK

Query:  QNGIDFEKLKKDGVPLRRFTMDFVHVL-RKNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
         NG++ +K++++G+ +  F  DF  +L  K+    W+ F G YD  YL+K + G   LPE+ EEF   V   +G  V D+K +   C GL  + GL+R++
Subjt:  QNGIDFEKLKKDGVPLRRFTMDFVHVL-RKNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKM
        +++  KR G  HHAGSDS LTARV TK+
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-4643.42Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK
        EVW  N   E+  + D L+H+  ++IDTEFPGC++ TP  A EE  Y D++FNV  T LIQLG T  +  G +  +WE N SDF+      N  SI+FLK
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLK

Query:  QNGIDFEKLKKDGVPLRRFTMDFVHVLR-KNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
         NG++ +K+ ++G+ +  F  DF  +L+ K+    W+ F G YD  YL+K + G   LPE+ EEF   V   +G  V D+K +   C GL  R GL+R++
Subjt:  QNGIDFEKLKKDGVPLRRFTMDFVHVLR-KNHICKWITFHGLYDIGYLLKAM-GFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKM
        +++  KR G  HHAGSDS LTARV TK+
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-5044.1Show/hide
Query:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGE-VGGSWEFNFSDFDSELDAHNPWSISFL
        EVW  N  +E++ + D L+H   ++IDTEFPGC++ TP  A +E  Y D++FNV  T LIQLG+T    FG+ +  +WE N SDF+      N  SI+FL
Subjt:  EVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGE-VGGSWEFNFSDFDSELDAHNPWSISFL

Query:  KQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNH-ICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS
        K NG+D +K++++G+ +  F M+F  +L + H   +W+TF G YD  YLLK +    LPE+ +EF   V   +G  V D+K M   C GL  R GL+R++
Subjt:  KQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNH-ICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVG-VVRDLKYMIRFCDGLEDRVGLERLS

Query:  ELVGEKRFGMKHHAGSDSMLTARVHTKMI
        +++  +R G  HHAGSDS LTARV TK+I
Subjt:  ELVGEKRFGMKHHAGSDSMLTARVHTKMI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-4843.69Show/hide
Query:  ISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLKQNGIDFEKLK
        +SL+ D L+ Y+ ++IDTEFP  +R T + A +E+ Y D+ F+V + KLIQLG+T  +  G +GG+WE NFSDF  + DA N  SI FL++NG+D  K++
Subjt:  ISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDAHNPWSISFLKQNGIDFEKLK

Query:  KDGVPLRRFTMDFVHVLRK-NHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGLERLSELVGEKRFGMKH
        ++G+ +  F  +   +L+K      W+TFHG YDI YLLK      LP + E F+  VA  +G V DLK M   C+GL  R+GLE L+   G  R G  H
Subjt:  KDGVPLRRFTMDFVHVLRK-NHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGLERLSELVGEKRFGMKH

Query:  HAGSDSMLTARVHTKMITSYGL
        HAGS++ LTA V  K+++ + L
Subjt:  HAGSDSMLTARVHTKMITSYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGAACAAGAAGCAGAATCGACTGCGTTCGAGGGCACGGCAGCCTTGGATTCGAGAAGTTTGGTGTTCGAATTACTACTCCGAGATCTCCCTCCTCGGCGATTT
TCTTCAACATTACAAAATCCTGTCCATCGACACCGAGTTTCCGGGATGTATTAGGAGCACCCCGCGAGGCGCCATCGAAGAGCAACTCTACGAAGATCTTCGATTCAACG
TGATGCAAACCAAGCTGATCCAACTCGGCGTAACAGCCTCGAACGAATTCGGGGAAGTCGGCGGCTCGTGGGAGTTCAACTTCTCGGATTTCGACTCGGAATTAGACGCG
CACAACCCTTGGTCGATCTCGTTCCTCAAACAGAACGGCATTGATTTCGAGAAGCTGAAGAAAGATGGTGTCCCATTGAGAAGATTCACTATGGATTTTGTTCATGTGTT
GAGAAAGAATCACATCTGTAAGTGGATTACATTCCACGGGTTATACGACATCGGGTATCTGCTGAAGGCGATGGGGTTCGTGTGGTTGCCCGAATCATTGGAGGAGTTTG
CAGGGATGGTTGCGAATGAAGTAGGGGTTGTGAGGGATTTGAAGTACATGATTCGATTCTGCGACGGGTTGGAAGATAGGGTCGGGCTCGAGAGATTGAGCGAATTGGTT
GGCGAGAAGAGGTTCGGGATGAAGCACCATGCTGGCTCGGATAGCATGTTGACGGCTCGTGTGCATACGAAGATGATTACAAGTTATGGTTTGGATTCGAGTATTTGTGA
TGGCTATTTGTTTGGAATCTCCAACAGACTTCACAGCCAGTACCACCAGTTTGTTACACCTTATGGAACCGTTATGTTTGGTCAATTCCCAATTTCATTACCAATTGCAA
TTAGTGCTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGAACAAGAAGCAGAATCGACTGCGTTCGAGGGCACGGCAGCCTTGGATTCGAGAAGTTTGGTGTTCGAATTACTACTCCGAGATCTCCCTCCTCGGCGATTT
TCTTCAACATTACAAAATCCTGTCCATCGACACCGAGTTTCCGGGATGTATTAGGAGCACCCCGCGAGGCGCCATCGAAGAGCAACTCTACGAAGATCTTCGATTCAACG
TGATGCAAACCAAGCTGATCCAACTCGGCGTAACAGCCTCGAACGAATTCGGGGAAGTCGGCGGCTCGTGGGAGTTCAACTTCTCGGATTTCGACTCGGAATTAGACGCG
CACAACCCTTGGTCGATCTCGTTCCTCAAACAGAACGGCATTGATTTCGAGAAGCTGAAGAAAGATGGTGTCCCATTGAGAAGATTCACTATGGATTTTGTTCATGTGTT
GAGAAAGAATCACATCTGTAAGTGGATTACATTCCACGGGTTATACGACATCGGGTATCTGCTGAAGGCGATGGGGTTCGTGTGGTTGCCCGAATCATTGGAGGAGTTTG
CAGGGATGGTTGCGAATGAAGTAGGGGTTGTGAGGGATTTGAAGTACATGATTCGATTCTGCGACGGGTTGGAAGATAGGGTCGGGCTCGAGAGATTGAGCGAATTGGTT
GGCGAGAAGAGGTTCGGGATGAAGCACCATGCTGGCTCGGATAGCATGTTGACGGCTCGTGTGCATACGAAGATGATTACAAGTTATGGTTTGGATTCGAGTATTTGTGA
TGGCTATTTGTTTGGAATCTCCAACAGACTTCACAGCCAGTACCACCAGTTTGTTACACCTTATGGAACCGTTATGTTTGGTCAATTCCCAATTTCATTACCAATTGCAA
TTAGTGCTCAGTGA
Protein sequenceShow/hide protein sequence
MTKNKKQNRLRSRARQPWIREVWCSNYYSEISLLGDFLQHYKILSIDTEFPGCIRSTPRGAIEEQLYEDLRFNVMQTKLIQLGVTASNEFGEVGGSWEFNFSDFDSELDA
HNPWSISFLKQNGIDFEKLKKDGVPLRRFTMDFVHVLRKNHICKWITFHGLYDIGYLLKAMGFVWLPESLEEFAGMVANEVGVVRDLKYMIRFCDGLEDRVGLERLSELV
GEKRFGMKHHAGSDSMLTARVHTKMITSYGLDSSICDGYLFGISNRLHSQYHQFVTPYGTVMFGQFPISLPIAISAQ