; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018413 (gene) of Chayote v1 genome

Gene IDSed0018413
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA-splicing factor SLU7
Genome locationLG14:20391276..20392264
RNA-Seq ExpressionSed0018413
SyntenySed0018413
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000386 - second spliceosomal transesterification activity (molecular function)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
InterPro domainsIPR021715 - Pre-mRNA-splicing factor SLU7 domain
IPR039974 - Pre-mRNA-splicing factor SLU7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PPD79477.1 hypothetical protein GOBAR_DD23591 [Gossypium barbadense]5.8e-3433.33Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN
              YD KRDRW+GYD+  YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T +    R R+DT  YLLNL +
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN

Query:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA
        + SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK+ K+ LKS+ K T        A 
Subjt:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA

Query:  EDMVVV---------------------------PKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE
        E+ + V                           PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT    I+  E
Subjt:  EDMVVV---------------------------PKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE

PPR84315.1 hypothetical protein GOBAR_AA36398 [Gossypium barbadense]1.7e-3333.07Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN
              YD KRDRW+GYD+  YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T +    R R+DT  YLLNL +
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN

Query:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA
        + SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK+ K+ LKS+ K T        A 
Subjt:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA

Query:  EDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE
        E+ +                            +PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT    I+  E
Subjt:  EDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE

XP_018434399.1 PREDICTED: pre-mRNA-splicing factor SLU7-like isoform X1 [Raphanus sativus]1.9e-3231.13Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A        PV+SLKHQR WK                                     K     P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDFKLLVGATTQTSTLTTATATT
              YD KRDRW+GYD+  Y+ +V+ RYEARDEAR NFLK+Q L+  D ++                        D+ K +  A  +    TT   +T
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDFKLLVGATTQTSTLTTATATT

Query:  SS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLPNT-----------QKRISG---------------------------PQTQAEFLNMNYKI
         +    R R+DT  YLLNL ++ SAYY+    +    PLPNT           Q R+SG                             +QAE L   YK 
Subjt:  SS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLPNT-----------QKRISG---------------------------PQTQAEFLNMNYKI

Query:  SKDMLKSQAKST--------TDAAEDM--------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        +K+ LK Q + T          + ED+                          + VPKSK+EEDV++ NH+SVWGSWWK +QWGY+CC+QT++NS CT  
Subjt:  SKDMLKSQAKST--------TDAAEDM--------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVEE
          I+  EE
Subjt:  PEIKPVEE

XP_020411368.1 pre-mRNA-splicing factor SLU7 isoform X4 [Prunus persica]8.4e-3332.22Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-----------------KALASTP------------------------YDAKRDRWSGYDSE
        INP+IP Y++S PWYL+A+          SLKHQR WK                 K+    P                        YD KRDRW+G+D+ 
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-----------------KALASTP------------------------YDAKRDRWSGYDSE

Query:  NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLN
         YA  V+ RYEARDEAR  +LK+Q L+  + +                           D+ K +  A  +    TT   +T +    R R+DT  YLLN
Subjt:  NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLN

Query:  LTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------T
        L ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  N+K+ KD LKS+ K         
Subjt:  LTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------T

Query:  DAAEDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEE
         A E+++                            +PKSK+EEDV++ NH+SVWGSWWK +QWGYKCCKQTIRNS CT    I+  EE
Subjt:  DAAEDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEE

XP_022974492.1 pre-mRNA-splicing factor SLU7 isoform X1 [Cucurbita maxima]1.9e-3231.94Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA
              YD KRDRW+GYD   YA  V+ RYEARDEAR NFLK+Q L+                  D ++DD K+          +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        + K+ LKS  K        +AA++                             + +PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

TrEMBL top hitse value%identityAlignment
A0A2P5VZT4 Pre-mRNA-splicing factor SLU78.2e-3433.07Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN
              YD KRDRW+GYD+  YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T +    R R+DT  YLLNL +
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTN

Query:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA
        + SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK+ K+ LKS+ K T        A 
Subjt:  LKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA

Query:  EDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE
        E+ +                            +PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT    I+  E
Subjt:  EDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVE

A0A5E4EJY9 Pre-mRNA-splicing factor SLU72.0e-3231.37Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA
              YD KRDRW+G+D+  YAC V+ RYEARDEAR  +LK+Q L+  + +                           D+ K +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  N+K
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKSTT-----DAAEDMVV----------------------------VPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        + KD LKS+ K T      +AA   V+                            +PKSK+EEDV++ NH+SVWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKSTT-----DAAEDMVV----------------------------VPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVEE
          I+  EE
Subjt:  PEIKPVEE

A0A6J0JHS2 Pre-mRNA-splicing factor SLU79.1e-3331.13Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A        PV+SLKHQR WK                                     K     P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDFKLLVGATTQTSTLTTATATT
              YD KRDRW+GYD+  Y+ +V+ RYEARDEAR NFLK+Q L+  D ++                        D+ K +  A  +    TT   +T
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDFKLLVGATTQTSTLTTATATT

Query:  SS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLPNT-----------QKRISG---------------------------PQTQAEFLNMNYKI
         +    R R+DT  YLLNL ++ SAYY+    +    PLPNT           Q R+SG                             +QAE L   YK 
Subjt:  SS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLPNT-----------QKRISG---------------------------PQTQAEFLNMNYKI

Query:  SKDMLKSQAKST--------TDAAEDM--------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        +K+ LK Q + T          + ED+                          + VPKSK+EEDV++ NH+SVWGSWWK +QWGY+CC+QT++NS CT  
Subjt:  SKDMLKSQAKST--------TDAAEDM--------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVEE
          I+  EE
Subjt:  PEIKPVEE

A0A6J1AVA1 Pre-mRNA-splicing factor SLU72.0e-3232.43Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     KA    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQS--------------RDHEKDDFKLLVG------------ATTQTSTLTTATA
              YD KRDRW+GYD+  YA  V+ RYEARDEAR  +LK+Q L+                D E DD  L V             A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQS--------------RDHEKDDFKLLVG------------ATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKST------TDAAEDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        + K+ LKS+ K T        A E+ +                           ++PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKST------TDAAEDMV---------------------------VVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

A0A6J1IHR4 Pre-mRNA-splicing factor SLU79.1e-3331.94Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+A+          SLKHQR WK                                     K+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA
              YD KRDRW+GYD   YA  V+ RYEARDEAR NFLK+Q L+                  D ++DD K+          +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  NYK
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        + K+ LKS  K        +AA++                             + +PKSK+EEDVF+ NH+SVWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

SwissProt top hitse value%identityAlignment
A2YQU8 Pre-mRNA-splicing factor SLU76.3e-3130.47Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW-------------------------------------KKALASTP------------------
        INP+IP Y++S PWYL+A           SLKHQRNW                                     KK+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW-------------------------------------KKALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA
              YD KRDRW+GYD   Y   V++ YEAR+EAR  +LK+Q L+                  + E+D  K+          +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  ++K
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKST------TDAAEDM---------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        I K+ LKS+ K          A+E+                            V +PKSK+EEDVF+ NH++VWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKST------TDAAEDM---------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

O23174 Pre-mRNA-splicing factor SLU7-B1.4e-3029.51Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++  PWYL        K    SLKHQ+NWK                                     KA    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA
              YD KRDRW+GYD+  Y   VV RY+A++EAR  +LK+Q L+  + +                           D+ + +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SA+Y+    S+   P P         L + Q R SG                            +QAE L  N+K
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        ++K+ LK+Q K T      +AA +                             V++PKSK+EEDV   NH+SVWGSWWK +QWGYKCC+QTIRNS CT  
Subjt:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVEELI
          I+  E  I
Subjt:  PEIKPVEELI

Q4WWR2 Pre-mRNA-splicing factor slu75.0e-1228.32Show/hide
Query:  YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFL--KQQNLQSRDHEKDDFKLLVG----ATTQTSTLTTATATTSSRARKDTPTYLLNLTNLKSAYYN
        +DAKRDRW+GYD   Y   V+  YE  ++ + N     Q   +  D E DD +  +     A         +TAT + R R+DT  YLLNL +L SA Y+
Subjt:  YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFL--KQQNLQSRDHEKDDFKLLVG----ATTQTSTLTTATATTSSRARKDTPTYLLNLTNLKSAYYN

Query:  ---------SISNPPPPPLPNTQKRISGPQTQAEF-------------------LNMNYKISKDMLKSQAKSTTDA------------------------
                    +     L   +  +      AEF                   L  N   S ++L+ + ++ T+A                        
Subjt:  ---------SISNPPPPPLPNTQKRISGPQTQAEF-------------------LNMNYKISKDMLKSQAKSTTDA------------------------

Query:  AEDMVV--------------------VPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEE
         E MV+                      KSK+ EDV V NH++V+GSWW   QWGY CC  T++NS CT E   K  EE
Subjt:  AEDMVV--------------------VPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEE

Q6ZK48 Pre-mRNA-splicing factor SLU76.3e-3130.47Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW-------------------------------------KKALASTP------------------
        INP+IP Y++S PWYL+A           SLKHQRNW                                     KK+    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW-------------------------------------KKALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA
              YD KRDRW+GYD   Y   V++ YEAR+EAR  +LK+Q L+                  + E+D  K+          +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL----------LVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG                            +QAE L  ++K
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKST------TDAAEDM---------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        I K+ LKS+ K          A+E+                            V +PKSK+EEDVF+ NH++VWGSWWK +QWGYKCCKQTIRNS CT  
Subjt:  ISKDMLKSQAKST------TDAAEDM---------------------------VVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

Q9SHY8 Pre-mRNA-splicing factor SLU7-A1.9e-2729.48Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+++          SLKHQR WK                                     KA    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG------------ATTQTSTLTTATA
              YD KRDRW+GYD   Y   V+  YEA+++AR  +LK+Q L+              + D E+D+  L V             A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG------------ATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SA+Y+    S+   P P         L + Q R SG                            +QAE L  +++
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKST------TDAAED---------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        ++K+ LKSQ K T        A ED                            V++PKSK+EEDV   NH+SVWGS+WK +QWGYKCC+Q IRNS CT  
Subjt:  ISKDMLKSQAKST------TDAAED---------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

Arabidopsis top hitse value%identityAlignment
AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor1.3e-2829.48Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++S PWYL+++          SLKHQR WK                                     KA    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG------------ATTQTSTLTTATA
              YD KRDRW+GYD   Y   V+  YEA+++AR  +LK+Q L+              + D E+D+  L V             A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG------------ATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SA+Y+    S+   P P         L + Q R SG                            +QAE L  +++
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKST------TDAAED---------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        ++K+ LKSQ K T        A ED                            V++PKSK+EEDV   NH+SVWGS+WK +QWGYKCC+Q IRNS CT  
Subjt:  ISKDMLKSQAKST------TDAAED---------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVE
          I+  E
Subjt:  PEIKPVE

AT3G45950.1 Pre-mRNA splicing Prp18-interacting factor3.2e-0626.92Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWKKALAST--------------------------------------------------------
        IN +IP Y+T  P Y         K    SLKHQ+NWK    ST                                                        
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWKKALAST--------------------------------------------------------

Query:  -----PYDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK-----------DDFKLLVGATTQTSTLTTATATTSS---------RA
              YD KRDRW+GYD  +Y C V  R+EA++ AR  +L +Q L ++  EK           D+ K+        + +     TT           R 
Subjt:  -----PYDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK-----------DDFKLLVGATTQTSTLTTATATTSS---------RA

Query:  RKDTPTYLLNLTNLKSAYYNSIS-NPPPPPLPNT
        R+D   YLLNL ++ SAYY+  S +    PLP T
Subjt:  RKDTPTYLLNLTNLKSAYYNSIS-NPPPPPLPNT

AT4G37120.1 Pre-mRNA splicing Prp18-interacting factor9.9e-3229.51Show/hide
Query:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------
        INP+IP Y++  PWYL        K    SLKHQ+NWK                                     KA    P                  
Subjt:  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-------------------------------------KALASTP------------------

Query:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA
              YD KRDRW+GYD+  Y   VV RY+A++EAR  +LK+Q L+  + +                           D+ + +  A  +    TT   
Subjt:  ------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA

Query:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK
        +T +    R R+DT  YLLNL ++ SA+Y+    S+   P P         L + Q R SG                            +QAE L  N+K
Subjt:  TTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPPPPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK

Query:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE
        ++K+ LK+Q K T      +AA +                             V++PKSK+EEDV   NH+SVWGSWWK +QWGYKCC+QTIRNS CT  
Subjt:  ISKDMLKSQAKSTT-----DAAED----------------------------MVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAE

Query:  PEIKPVEELI
          I+  E  I
Subjt:  PEIKPVEELI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTAGATCTAAATCTAAGCTGCATGAGGAAGCCATAAACCCTAACATTCCAAGTTATATTACTTCAACGCCTTGGTATCTCCATGCGAAGGGATCCGTAACGAC
GAAGGGACCAGTGCGGAGTTTGAAACATCAAAGAAACTGGAAGAAAGCACTTGCAAGTACTCCCTATGATGCAAAAAGGGATCGCTGGAGTGGTTATGATTCTGAAAATT
ATGCTTGTGATGTGGTCTCGAGATATGAGGCTCGAGATGAAGCAAGAAGCAATTTCTTAAAACAACAAAATCTTCAGAGTCGTGATCATGAAAAAGATGACTTCAAGCTG
CTGGTTGGAGCGACGACCCAAACATCAACATTGACGACGGCGACGGCAACAACTTCTTCTCGTGCTCGAAAAGACACACCAACATATCTTTTGAACTTGACGAATTTAAA
ATCTGCCTATTATAATTCCATATCCAATCCTCCTCCTCCTCCTCTTCCAAACACTCAGAAAAGAATTAGTGGGCCTCAAACACAAGCTGAGTTTCTCAATATGAACTATA
AAATTAGTAAAGACATGTTGAAGTCACAAGCCAAGAGTACTACCGATGCTGCTGAGGATATGGTTGTTGTTCCGAAAAGTAAATTCGAGGAGGATGTTTTCGTATATAAC
CACAGTAGCGTTTGGGGGTCATGGTGGAAAGGCAATCAATGGGGCTACAAGTGCTGTAAACAAACTATACGAAACAGCAACTGCACTGCCGAGCCTGAAATTAAGCCTGT
TGAGGAACTCATTTGA
mRNA sequenceShow/hide mRNA sequence
TAAGCTCTGTGATTTGTACTCCAAGCGTTGGTTCAAGATAACATATGGCTACTAGATCTAAATCTAAGCTGCATGAGGAAGCCATAAACCCTAACATTCCAAGTTATATT
ACTTCAACGCCTTGGTATCTCCATGCGAAGGGATCCGTAACGACGAAGGGACCAGTGCGGAGTTTGAAACATCAAAGAAACTGGAAGAAAGCACTTGCAAGTACTCCCTA
TGATGCAAAAAGGGATCGCTGGAGTGGTTATGATTCTGAAAATTATGCTTGTGATGTGGTCTCGAGATATGAGGCTCGAGATGAAGCAAGAAGCAATTTCTTAAAACAAC
AAAATCTTCAGAGTCGTGATCATGAAAAAGATGACTTCAAGCTGCTGGTTGGAGCGACGACCCAAACATCAACATTGACGACGGCGACGGCAACAACTTCTTCTCGTGCT
CGAAAAGACACACCAACATATCTTTTGAACTTGACGAATTTAAAATCTGCCTATTATAATTCCATATCCAATCCTCCTCCTCCTCCTCTTCCAAACACTCAGAAAAGAAT
TAGTGGGCCTCAAACACAAGCTGAGTTTCTCAATATGAACTATAAAATTAGTAAAGACATGTTGAAGTCACAAGCCAAGAGTACTACCGATGCTGCTGAGGATATGGTTG
TTGTTCCGAAAAGTAAATTCGAGGAGGATGTTTTCGTATATAACCACAGTAGCGTTTGGGGGTCATGGTGGAAAGGCAATCAATGGGGCTACAAGTGCTGTAAACAAACT
ATACGAAACAGCAACTGCACTGCCGAGCCTGAAATTAAGCCTGTTGAGGAACTCATTTGAGAACACAAAAAGCTGCCTACTCTTAATTTTAGAATTACTATGTAAACTCA
CTTTTAGATCATAAGCCACATTGCATTTGTTTTATCTTTTTTATTCCATATTAGTTATAGGATTCATTTAACATTCTATGTATGTTGTCTCCATTCTTTTTTGTCAAAC
Protein sequenceShow/hide protein sequence
MATRSKSKLHEEAINPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWKKALASTPYDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEKDDFKL
LVGATTQTSTLTTATATTSSRARKDTPTYLLNLTNLKSAYYNSISNPPPPPLPNTQKRISGPQTQAEFLNMNYKISKDMLKSQAKSTTDAAEDMVVVPKSKFEEDVFVYN
HSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEELI