CuGenDBv2

Gene ID	Sed0018416
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Genome location	LG04:15195790..15199467
RNA-Seq Expression	Sed0018416
Synteny	Sed0018416
Gene Ontology terms	GO:0009451 - RNA modification (biological process) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0003723 - RNA binding (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR002885 - Pentatricopeptide repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577831.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]

7.4e-159

57.81

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHD  DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

KAG7015869.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.4e-159

57.81

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHD  DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

XP_022159229.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]

1.3e-158

58.16

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Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MPEVDQC WNSMISGFEQHD  DEAL+YFA MH HG L+NEYSFGSALSACAGL+D KL SQIH LI  SNYLSDV+MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEALVIF EMIKC  + DEVT ASVV ACATI AI EGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI +ARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA ILFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRFQ GEE D+ VGNS I +                     C+     IVGYAQNGFGN+ALG          KPD VTMIGV CACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYF+SMSAQHGLV LKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD E S PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMRKR             +G +NVFMVKDK+HPKKKE Y LL TLL+Q++          +EIDEEE
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

XP_022923215.1 pentatricopeptide repeat-containing protein At2g13600 [Cucurbita moschata]

2.8e-158

57.64

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Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHD  DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL + 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

XP_022965365.1 pentatricopeptide repeat-containing protein At2g13600 [Cucurbita maxima]

6.7e-160

57.81

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Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHDC DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NV+RIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJ63 Uncharacterized protein

3.1e-155

57.12

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Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQH   DEAL YFA MHGHG L+NEYSFGSALSACAGLQDLKL SQIH L+  SNYLSDV+MG ALVDMYSK  RV+ AQ+VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
           VR                 +DEAL IFVEMIKC  +PDEVT ASVV ACATI AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARII
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FD MPIRSVV ETS                     M +DV T    IA CTQNGENEEA ILFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE
        VLKHGFRFQYGE+ DV VGNS I +                     C+     IVGYAQNGFGNKAL            PD VTMIGV CACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG +YFRSM+AQHGL+PLKDH                               ++GSLLAACKVH+NI+LGEYVV+KLL+VD ENS PYVLLSNMY E  D
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W+NVVR+RKLMR+R             +G +NVFMVKDKRH +KKE YM+L T+LQQ+K          +E DE+E
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

A0A5A7VCZ2 Pentatricopeptide repeat-containing protein

3.6e-151

56.42

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MPEVDQC WNSMISGFEQH    EAL YFA MHGHG L+NEYSFGSALSACAGLQDLKL SQIH L+  SNYLSDV+MG ALVDMYSK  RV+ AQ+ FD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
           VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACATI AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARII
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FD MPIRSVV ETS                     M +DV T    IA CTQNGENEEA ILFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE
        VLKHGFRFQYGE+ DV VGNS I +                     C+     IVGYAQNGFGNKAL            PD VTMIGV  ACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG +YFRSM+AQHGL+PLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY E  D
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W+NVVR+RKLMR+R             +G +NVFMVKDKRH +KKE  M+L T+L Q+K          +E DE+E
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

A0A6J1E1T7 pentatricopeptide repeat-containing protein At2g13600-like

6.1e-159

58.16

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MPEVDQC WNSMISGFEQHD  DEAL+YFA MH HG L+NEYSFGSALSACAGL+D KL SQIH LI  SNYLSDV+MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEALVIF EMIKC  + DEVT ASVV ACATI AI EGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI +ARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA ILFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRFQ GEE D+ VGNS I +                     C+     IVGYAQNGFGN+ALG          KPD VTMIGV CACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYF+SMSAQHGLV LKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD E S PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMRKR             +G +NVFMVKDK+HPKKKE Y LL TLL+Q++          +EIDEEE
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

A0A6J1EB52 pentatricopeptide repeat-containing protein At2g13600

1.4e-158

57.64

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHD  DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL + 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NVVRIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

A0A6J1HNH1 pentatricopeptide repeat-containing protein At2g13600

3.2e-160

57.81

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MP+VDQC WNSMISGFEQHDC DEAL YF  MHGHG  +NEYSFGSALSACAGLQDLK+ SQIH LI  SNYLSD++MG ALVDMYSK  RVDCA++VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
        G  VR                 +DEAL IFVEMI+C  +PDEVT ASVV ACAT+ AIKEGQQIHARVVKCDEFRNDLIL NA +DMY+KC+RI EARI+
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH
        FDRMPIRSVV ETS                     M +DV T    IA CTQNGENEEA  LFRLLK+E                       LG+Q HSH
Subjt:  FDRMPIRSVVCETS---------------------MRQDVTTGMRFIAECTQNGENEEAPILFRLLKKE----------------------LLGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE
        VLKHGFRF+YG+E D+ VGNS I +                     C+     IVGYAQNGFGNKALG          KPD VTMIGV  ACSHAGL D 
Subjt:  VLKHGFRFQYGEELDVSVGNSSICI---------------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYFRSM A+HGLVPLKDH                               ++GSLLAACKVH+NI+LGEYVVEKLL+VD ENS PYVLLSNMY ERGD
Subjt:  EGCHYFRSMSAQHGLVPLKDH-----------------------------LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE
        W NV+RIRKLMR+R             +G +NVFMVKDKRH +K+E YMLL TLLQQ+K          DEIDEE+
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLK----------DEIDEEE

SwissProt top hits

e value

%identity

Alignment

Q9LFL5 Pentatricopeptide repeat-containing protein At5g16860

8.0e-39

26.53

Show/hide

Query:  EVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIH------GLISESNYLSDVHMGY-ALVDMYSKRRRVDCA
        ++D   W++ ISG+ Q     EAL     M   G   NE +  S LS CA +  L    +IH       +    N   D +M    L+DMY+K ++VD A
Subjt:  EVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIH------GLISESNYLSDVHMGY-ALVDMYSKRRRVDCA

Query:  QNVFDGTIVR-------------------IDEALVIFVEMIK--CEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKC
        + +FD    +                    ++AL +  EM +  C+ +P+  T +  ++ACA++ A++ G+QIHA  ++  +    L +SN  IDMY+KC
Subjt:  QNVFDGTIVR-------------------IDEALVIFVEMIK--CEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKC

Query:  SRIKEARIIFDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIV
          I +AR++FD M  ++ V  TS+                                                                          + 
Subjt:  SRIKEARIIFDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIV

Query:  GYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYG
        GY  +G+G +ALG          K D VT++ V  ACSH+G+ D +G  YF  M    G+ P  +H                               ++ 
Subjt:  GYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYG

Query:  SLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMR-----KRRG--------HMNVFMVKDKRHPKKKEFYMLLVTLL
        + L+ C++H  +ELGEY  EK+ ++   +   Y LLSN+Y   G W++V RIR LMR     KR G            F V DK HP  KE Y +L+  +
Subjt:  SLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMR-----KRRG--------HMNVFMVKDKRHPKKKEFYMLLVTLL

Query:  QQLKD
        Q++KD
Subjt:  QQLKD

Q9LW63 Putative pentatricopeptide repeat-containing protein At3g23330

4.7e-39

26.9

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVF-
        MP  D   +N++I+G+ Q    ++AL     M       + ++  S L   +   D+    +IHG +      SDV++G +LVDMY+K  R++ ++ VF 
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVF-

Query:  -----DG----TIV-------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
             DG    ++V       R +EAL +F +M+  + KP  V F+SV+ ACA +  +  G+Q+H  V++   F +++ +++A +DMYSKC  IK AR I
Subjt:  -----DG----TIV-------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIVGYAQNGFGN
        FDRM +   V  T++          I     +G   EA  LF  +K++ +                                                  
Subjt:  FDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIVGYAQNGFGN

Query:  KALGKPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVV
            KP+ V  + V  ACSH GL D E   YF SM+  +GL    +H                               ++ +LL++C VH+N+EL E V 
Subjt:  KALGKPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVV

Query:  EKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDE
        EK+  VD EN   YVL+ NMY   G W+ + ++R  MRK+             +   + F+  D+ HP   +    L  +++Q++ E
Subjt:  EKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDE

Q9SIT7 Pentatricopeptide repeat-containing protein At2g13600

3.2e-120

46.29

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MPE DQC WNSM+SGF QHD  +EAL YFA MH  G ++NEYSF S LSAC+GL D+    Q+H LI++S +LSDV++G ALVDMYSK   V+ AQ VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
            R                   EAL +F  M++   +PDEVT ASV+ ACA++ AIK GQ++H RVVK D+ RND+ILSNAF+DMY+KCSRIKEAR I
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETSM---------------------RQDVTTGMRFIAECTQNGENEEAPILFRLLKKEL----------------------LGQQTHSH
        FD MPIR+V+ ETSM                      ++V +    IA  TQNGENEEA  LF LLK+E                       LG Q H H
Subjt:  FDRMPIRSVVCETSM---------------------RQDVTTGMRFIAECTQNGENEEAPILFRLLKKEL----------------------LGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSI-------CI--------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE
        VLKHGF+FQ GEE D+ VGNS I       C+              C+     I+G+AQNG+GN+AL           KPD +TMIGV  AC HAG F E
Subjt:  VLKHGFRFQYGEELDVSVGNSSI-------CI--------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYF SM+   G+ PL+DH                               ++GSLLAACKVH+NI LG+YV EKLL+V+  NS PYVLLSNMY E G 
Subjt:  EGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDEIDEEE
        W +V+ +RK MRK              +GH +VFMVKDK HP+KK+ + LL  L+ +++ E D  E
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDEIDEEE

Q9SVP7 Pentatricopeptide repeat-containing protein At4g13650

1.9e-40

26.78

Show/hide

Query:  LWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNV---FDGTIV
        LWN M+  +   D    +   F  M     + N+Y++ S L  C  L DL+L  QIH  I ++N+  + ++   L+DMY+K  ++D A ++   F G  V
Subjt:  LWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNV---FDGTIV

Query:  RI--------------DEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR
                        D+AL  F +M+    + DEV   + V ACA + A+KEGQQIHA+      F +DL   NA + +YS+C +I+E+ + F++    
Subjt:  RI--------------DEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR

Query:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL----------------------GQQTHSHVLKHGFRFQ-------------------
          +   ++          ++   Q+G NEEA  +F  + +E +                      G+Q H+ + K G+  +                   
Subjt:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL----------------------GQQTHSHVLKHGFRFQ-------------------

Query:  -YGEELDVSVGNSSICICICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGL--------------
           + L+VS  N      I     I  Y+++GFG++AL           +P+ VT++GV  ACSH GL D +G  YF SM++++GL              
Subjt:  -YGEELDVSVGNSSICICICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGL--------------

Query:  ---------------VPLKDHLYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RG
                       +P+K    ++ +LL+AC VH+N+E+GE+    LL+++ E+S  YVLLSN+Y     W      R+ M+++             + 
Subjt:  ---------------VPLKDHLYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RG

Query:  HMNVFMVKDKRHPKKKEFY
         ++ F V D+ HP   E +
Subjt:  HMNVFMVKDKRHPKKKEFY

Q9ZUW3 Pentatricopeptide repeat-containing protein At2g27610

6.5e-41

29.11

Show/hide

Query:  WNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSK----------RRRVDCAQNV
        WNSMISG+  +    EAL  F SM  +   ++E SF S +  CA L++L+   Q+H  + +  +L D ++  AL+  YSK           + + C  NV
Subjt:  WNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSK----------RRRVDCAQNV

Query:  FDGTIV--------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR
           T +          +EA+ +F EM +   +P+E T++ ++ A   I       ++HA+VVK +  R+  +   A +D Y K  +++EA  +F  +  +
Subjt:  FDGTIV--------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR

Query:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL--GQQTHSHVLK---------------HGFRFQYGEELDVSVGNSSICI--------
         +V  ++M          +A   Q GE E A  +F  L K  +   + T S +L                HGF  +    LD S+  SS  +        
Subjt:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL--GQQTHSHVLK---------------HGFRFQYGEELDVSVGNSSICI--------

Query:  ---------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDH------LY--
                        +     I GYAQ+G   KAL           K D VT IGV  AC+HAGL  EEG  YF  M     + P K+H      LY  
Subjt:  ---------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDH------LY--

Query:  ---------------------MYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHM
                             ++ ++LAAC+VH+  ELG    EK++ +  E+S  YVLLSNMY E GDW+   ++RKLM +R             +   
Subjt:  ---------------------MYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHM

Query:  NVFMVKDKRHPKKKEFYMLLVTLLQQLKD
          F+  D+ HP K + YM L  L  +LKD
Subjt:  NVFMVKDKRHPKKKEFYMLLVTLLQQLKD

Arabidopsis top hits

e value

%identity

Alignment

AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein

2.2e-121

46.29

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD
        MPE DQC WNSM+SGF QHD  +EAL YFA MH  G ++NEYSF S LSAC+GL D+    Q+H LI++S +LSDV++G ALVDMYSK   V+ AQ VFD
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFD

Query:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
            R                   EAL +F  M++   +PDEVT ASV+ ACA++ AIK GQ++H RVVK D+ RND+ILSNAF+DMY+KCSRIKEAR I
Subjt:  GTIVR-----------------IDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETSM---------------------RQDVTTGMRFIAECTQNGENEEAPILFRLLKKEL----------------------LGQQTHSH
        FD MPIR+V+ ETSM                      ++V +    IA  TQNGENEEA  LF LLK+E                       LG Q H H
Subjt:  FDRMPIRSVVCETSM---------------------RQDVTTGMRFIAECTQNGENEEAPILFRLLKKEL----------------------LGQQTHSH

Query:  VLKHGFRFQYGEELDVSVGNSSI-------CI--------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE
        VLKHGF+FQ GEE D+ VGNS I       C+              C+     I+G+AQNG+GN+AL           KPD +TMIGV  AC HAG F E
Subjt:  VLKHGFRFQYGEELDVSVGNSSI-------CI--------------CICICIYIVGYAQNGFGNKAL----------GKPDDVTMIGVHCACSHAGLFDE

Query:  EGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD
        EG HYF SM+   G+ PL+DH                               ++GSLLAACKVH+NI LG+YV EKLL+V+  NS PYVLLSNMY E G 
Subjt:  EGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGD

Query:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDEIDEEE
        W +V+ +RK MRK              +GH +VFMVKDK HP+KK+ + LL  L+ +++ E D  E
Subjt:  WRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDEIDEEE

AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.6e-42

29.11

Show/hide

Query:  WNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSK----------RRRVDCAQNV
        WNSMISG+  +    EAL  F SM  +   ++E SF S +  CA L++L+   Q+H  + +  +L D ++  AL+  YSK           + + C  NV
Subjt:  WNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSK----------RRRVDCAQNV

Query:  FDGTIV--------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR
           T +          +EA+ +F EM +   +P+E T++ ++ A   I       ++HA+VVK +  R+  +   A +D Y K  +++EA  +F  +  +
Subjt:  FDGTIV--------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR

Query:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL--GQQTHSHVLK---------------HGFRFQYGEELDVSVGNSSICI--------
         +V  ++M          +A   Q GE E A  +F  L K  +   + T S +L                HGF  +    LD S+  SS  +        
Subjt:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL--GQQTHSHVLK---------------HGFRFQYGEELDVSVGNSSICI--------

Query:  ---------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDH------LY--
                        +     I GYAQ+G   KAL           K D VT IGV  AC+HAGL  EEG  YF  M     + P K+H      LY  
Subjt:  ---------------CICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDH------LY--

Query:  ---------------------MYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHM
                             ++ ++LAAC+VH+  ELG    EK++ +  E+S  YVLLSNMY E GDW+   ++RKLM +R             +   
Subjt:  ---------------------MYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHM

Query:  NVFMVKDKRHPKKKEFYMLLVTLLQQLKD
          F+  D+ HP K + YM L  L  +LKD
Subjt:  NVFMVKDKRHPKKKEFYMLLVTLLQQLKD

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.3e-40

26.9

Show/hide

Query:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVF-
        MP  D   +N++I+G+ Q    ++AL     M       + ++  S L   +   D+    +IHG +      SDV++G +LVDMY+K  R++ ++ VF 
Subjt:  MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVF-

Query:  -----DG----TIV-------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII
             DG    ++V       R +EAL +F +M+  + KP  V F+SV+ ACA +  +  G+Q+H  V++   F +++ +++A +DMYSKC  IK AR I
Subjt:  -----DG----TIV-------RIDEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARII

Query:  FDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIVGYAQNGFGN
        FDRM +   V  T++          I     +G   EA  LF  +K++ +                                                  
Subjt:  FDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIVGYAQNGFGN

Query:  KALGKPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVV
            KP+ V  + V  ACSH GL D E   YF SM+  +GL    +H                               ++ +LL++C VH+N+EL E V 
Subjt:  KALGKPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYGSLLAACKVHQNIELGEYVV

Query:  EKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDE
        EK+  VD EN   YVL+ NMY   G W+ + ++R  MRK+             +   + F+  D+ HP   +    L  +++Q++ E
Subjt:  EKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDE

AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein

1.3e-41

26.78

Show/hide

Query:  LWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNV---FDGTIV
        LWN M+  +   D    +   F  M     + N+Y++ S L  C  L DL+L  QIH  I ++N+  + ++   L+DMY+K  ++D A ++   F G  V
Subjt:  LWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNV---FDGTIV

Query:  RI--------------DEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR
                        D+AL  F +M+    + DEV   + V ACA + A+KEGQQIHA+      F +DL   NA + +YS+C +I+E+ + F++    
Subjt:  RI--------------DEALVIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIR

Query:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL----------------------GQQTHSHVLKHGFRFQ-------------------
          +   ++          ++   Q+G NEEA  +F  + +E +                      G+Q H+ + K G+  +                   
Subjt:  SVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELL----------------------GQQTHSHVLKHGFRFQ-------------------

Query:  -YGEELDVSVGNSSICICICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGL--------------
           + L+VS  N      I     I  Y+++GFG++AL           +P+ VT++GV  ACSH GL D +G  YF SM++++GL              
Subjt:  -YGEELDVSVGNSSICICICICIYIVGYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGL--------------

Query:  ---------------VPLKDHLYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RG
                       +P+K    ++ +LL+AC VH+N+E+GE+    LL+++ E+S  YVLLSN+Y     W      R+ M+++             + 
Subjt:  ---------------VPLKDHLYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKR-------------RG

Query:  HMNVFMVKDKRHPKKKEFY
         ++ F V D+ HP   E +
Subjt:  HMNVFMVKDKRHPKKKEFY

AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein

5.6e-40

26.53

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Query:  EVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIH------GLISESNYLSDVHMGY-ALVDMYSKRRRVDCA
        ++D   W++ ISG+ Q     EAL     M   G   NE +  S LS CA +  L    +IH       +    N   D +M    L+DMY+K ++VD A
Subjt:  EVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIH------GLISESNYLSDVHMGY-ALVDMYSKRRRVDCA

Query:  QNVFDGTIVR-------------------IDEALVIFVEMIK--CEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKC
        + +FD    +                    ++AL +  EM +  C+ +P+  T +  ++ACA++ A++ G+QIHA  ++  +    L +SN  IDMY+KC
Subjt:  QNVFDGTIVR-------------------IDEALVIFVEMIK--CEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKC

Query:  SRIKEARIIFDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIV
          I +AR++FD M  ++ V  TS+                                                                          + 
Subjt:  SRIKEARIIFDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEEAPILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIV

Query:  GYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYG
        GY  +G+G +ALG          K D VT++ V  ACSH+G+ D +G  YF  M    G+ P  +H                               ++ 
Subjt:  GYAQNGFGNKALG----------KPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDHL-----------------------------YMYG

Query:  SLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMR-----KRRG--------HMNVFMVKDKRHPKKKEFYMLLVTLL
        + L+ C++H  +ELGEY  EK+ ++   +   Y LLSN+Y   G W++V RIR LMR     KR G            F V DK HP  KE Y +L+  +
Subjt:  SLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMR-----KRRG--------HMNVFMVKDKRHPKKKEFYMLLVTLL

Query:  QQLKD
        Q++KD
Subjt:  QQLKD

Sequences

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CDS sequence

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ATGCCTGAAGTTGATCAATGCTTGTGGAATTCTATGATTTCGGGTTTTGAACAACACGATTGCTCTGATGAAGCTTTGAGTTATTTTGCTTCAATGCATGGTCATGGCTC
TCTGATAAATGAATATTCATTTGGTAGTGCTCTTAGTGCTTGTGCAGGTTTACAAGATTTGAAATTGGATTCCCAAATCCATGGTTTAATATCTGAGTCAAATTATCTAT
CGGATGTGCATATGGGCTATGCTCTAGTAGACATGTACTCTAAACGTAGAAGAGTTGACTGTGCTCAGAATGTTTTTGATGGAACGATTGTGAGAATTGATGAGGCTCTT
GTTATTTTTGTTGAGATGATCAAATGTGAGGCTAAACCTGACGAGGTAACTTTTGCAAGTGTTGTTATTGCATGTGCAACTATCTTTGCAATCAAGGAAGGTCAGCAGAT
TCATGCTCGAGTTGTAAAATGTGATGAGTTTAGAAATGATCTTATTTTAAGCAATGCATTCATTGATATGTATTCTAAATGTAGCAGGATTAAAGAGGCTAGAATAATTT
TCGATCGGATGCCAATTAGGAGTGTGGTGTGTGAAACCTCAATGCGGCAAGATGTGACTACAGGAATGCGCTTTATTGCAGAGTGTACACAAAATGGAGAGAATGAAGAG
GCACCTATACTCTTCCGTCTTTTGAAAAAGGAGTTGCTCGGACAACAAACTCACTCTCATGTTTTAAAGCATGGATTTCGATTCCAATATGGGGAAGAGTTGGATGTTTC
TGTTGGGAATTCCTCAATATGTATATGTATATGTATATGTATATATATAGTTGGATATGCACAAAATGGTTTTGGCAATAAAGCACTTGGAAAACCAGATGATGTAACAA
TGATAGGTGTTCATTGCGCCTGCAGTCATGCCGGGTTGTTCGATGAAGAAGGCTGCCATTACTTTCGATCAATGAGTGCACAACATGGTTTGGTCCCATTAAAGGATCAC
CTATACATGTATGGATCTTTGCTTGCTGCTTGTAAAGTCCATCAAAACATCGAATTAGGAGAATATGTGGTGGAGAAGCTTTTAGATGTAGATCTTGAGAATTCTAGGCC
ATATGTTCTACTCTCGAACATGTATGTTGAACGTGGAGATTGGAGAAATGTTGTGAGAATAAGAAAGCTGATGAGAAAGAGAAGAGGTCACATGAATGTTTTTATGGTTA
AAGATAAAAGGCATCCAAAGAAGAAAGAATTCTATATGCTTTTGGTAACACTTCTACAACAATTGAAAGACGAGATTGATGAAGAAGAATAA

mRNA sequence

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Protein sequence

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MPEVDQCLWNSMISGFEQHDCSDEALSYFASMHGHGSLINEYSFGSALSACAGLQDLKLDSQIHGLISESNYLSDVHMGYALVDMYSKRRRVDCAQNVFDGTIVRIDEAL
VIFVEMIKCEAKPDEVTFASVVIACATIFAIKEGQQIHARVVKCDEFRNDLILSNAFIDMYSKCSRIKEARIIFDRMPIRSVVCETSMRQDVTTGMRFIAECTQNGENEE
APILFRLLKKELLGQQTHSHVLKHGFRFQYGEELDVSVGNSSICICICICIYIVGYAQNGFGNKALGKPDDVTMIGVHCACSHAGLFDEEGCHYFRSMSAQHGLVPLKDH
LYMYGSLLAACKVHQNIELGEYVVEKLLDVDLENSRPYVLLSNMYVERGDWRNVVRIRKLMRKRRGHMNVFMVKDKRHPKKKEFYMLLVTLLQQLKDEIDEEE

Sed0018416 (gene) of Chayote v1 genome