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Sed0018421 (gene) of Chayote v1 genome

Gene IDSed0018421
OrganismSechium edule (Chayote v1)
DescriptionPollen preferential protein
Genome locationLG01:62891704..62892393
RNA-Seq ExpressionSed0018421
SyntenySed0018421
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040078.1 uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa]1.0e-4571.14Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE
        MN+ V+ RSPPGTRQQPLLR    NRVKEK+RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR+  +  K  AGA   G E
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE

Query:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        W  N DR  E    SLP+SYLSSEDMELE+ MW+RFYG GF RTPSQRE
Subjt:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

KAE8649474.1 hypothetical protein Csa_018184 [Cucumis sativus]1.4e-4772.22Show/hide
Query:  VVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPENRDR
        V+ RSPPGTRQQPLLR    NRVKEK+RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR++     A AG G EW  N D 
Subjt:  VVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPENRDR

Query:  SGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
         GE      SLP+SYLSSED+ELE+ MW+RFYGTGFWRTPSQRE
Subjt:  SGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

KAG6570325.1 hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4568.42Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGA--
        MN++V+ RSPP TRQQPLL     NR+KEK RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKK WNK RGKR    K+N+A  AA GA  
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGA--

Query:  GIEWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        G E P++   ++  GE SLP+SYLSSED+ELE+ MWD+FYGTGFWRTPSQRE
Subjt:  GIEWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

XP_022943329.1 uncharacterized protein LOC111448127 [Cucurbita moschata]5.1e-4567.33Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGAGI
        MN++V+ RSPP TRQQPLL     NR+KEK RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKK WNK RGKR    K+N+A    A  G 
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGAGI

Query:  EWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        E P++   ++  GE SLP+SYLSSED+ELE+ MWD+FYGTGFWRTPSQRE
Subjt:  EWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

XP_038901895.1 uncharacterized protein LOC120088573 [Benincasa hispida]7.7e-4972.79Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPE
        MN+SV+ +SPPGTRQQPLLR    NRVKEK+RFA  AGGTAA CAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR+  Q  K  A AG EW  
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPE

Query:  NRDRS----GEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        N DR     GE SLP+SY SSEDMELE+ MW+RFYGTGFWRTPSQRE
Subjt:  NRDRS----GEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

TrEMBL top hitse value%identityAlignment
A0A0A0L1Q3 Uncharacterized protein2.2e-4971.62Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPE
        MN+ V+ RSPPGTRQQPLLR    NRVKEK+RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR++     A AG G EW  
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPE

Query:  NRDRSGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        N D  GE      SLP+SYLSSED+ELE+ MW+RFYGTGFWRTPSQRE
Subjt:  NRDRSGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

A0A1S3BMC5 uncharacterized protein LOC1034916014.3e-4570.47Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE
        MN+ V+ RSPPGTRQQPLLR    N VKEK+RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR+  +  K  AGA   G E
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE

Query:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        W  N DR  E    SLP+SYLSSEDMELE+ MW+RFYG GF RTPSQRE
Subjt:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

A0A5D3DDP5 Uncharacterized protein5.0e-4671.14Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE
        MN+ V+ RSPPGTRQQPLLR    NRVKEK+RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKKVWNK RGKR+  +  K  AGA   G E
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGA---GIE

Query:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        W  N DR  E    SLP+SYLSSEDMELE+ MW+RFYG GF RTPSQRE
Subjt:  WPENRDRSGE---PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

A0A6J1FTZ9 uncharacterized protein LOC1114481272.5e-4567.33Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGAGI
        MN++V+ RSPP TRQQPLL     NR+KEK RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKK WNK RGKR    K+N+A    A  G 
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAAAGAGI

Query:  EWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
        E P++   ++  GE SLP+SYLSSED+ELE+ MWD+FYGTGFWRTPSQRE
Subjt:  EWPEN---RDRSGEPSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

A0A6J1JA30 uncharacterized protein LOC1114839381.2e-4466.67Show/hide
Query:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAA-AGAG
        MN++V+ RSPP TRQQPLL     NR+KEK RFA  AGGTAAECAAICCCFPC +MNLLILT+YKVPVG+CKK WN+ RGKR    KKN+A  AA AG  
Subjt:  MNESVVFRSPPGTRQQPLLR----NRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR----KKNQAVKAA-AGAG

Query:  IEWPENRDRSGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE
            E     GE      SLP+SYLSSED+ELE+ MWD+FYGTGFWRTPSQRE
Subjt:  IEWPENRDRSGE-----PSLPASYLSSEDMELEEAMWDRFYGTGFWRTPSQRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein3.8e-2238.93Show/hide
Query:  ESVVFRSPPGTRQQPLLRNRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR--KKNQAVKAAAGAGIEWPENRDR
        ES +  SPP T       +  KE+++    AGG AAECAA+ CC PC V+NL++L +YKVP  +CKK W + + +R  +K   + A+A A         R
Subjt:  ESVVFRSPPGTRQQPLLRNRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKR--KKNQAVKAAAGAGIEWPENRDR

Query:  SGEPSLPASYLSSE----------DMELEEAMWDRFYGTGFWRTPSQRE
          E  L A  +  E           + LE  M DRFYG GFWR+PSQ++
Subjt:  SGEPSLPASYLSSE----------DMELEEAMWDRFYGTGFWRTPSQRE

AT3G11690.1 unknown protein2.8e-1733.14Show/hide
Query:  RQQPLLRNRVKEKQRFAAA--------AGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQR----------------GKRKKNQAVKAAAG
        R+QPLL+  +      A+          GGT A CAA+ CC PCG++NLL+L IYKVP GIC++    +R                GK ++ Q V   + 
Subjt:  RQQPLLRNRVKEKQRFAAA--------AGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQR----------------GKRKKNQAVKAAAG

Query:  AGIEWPENRDRSGE-------------PSLPASYLSSED--------MELEEAMWDRFYGTGFWRTPSQREA
          I   ++ D S +              S+   + + E+        + LE+ MW+RFYG GFWR+PSQRE+
Subjt:  AGIEWPENRDRSGE-------------PSLPASYLSSED--------MELEEAMWDRFYGTGFWRTPSQREA

AT5G06380.1 unknown protein3.5e-1539.34Show/hide
Query:  AAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPENRDRSGEPSLPASYLSSEDME------------
        A   GGT A CAA+C C PC V+NL++L +YK+P G+C++     R  R+K  A K    +G E+     R G        L S D E            
Subjt:  AAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPENRDRSGEPSLPASYLSSEDME------------

Query:  LEEAMWDRFYGTGFWRTPSQRE
        LE+ MW RFY  GFWR+ SQ E
Subjt:  LEEAMWDRFYGTGFWRTPSQRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGAGCGTCGTTTTCCGATCACCGCCGGGAACACGGCAGCAACCGCTGTTGAGAAACAGAGTTAAGGAAAAACAGAGGTTCGCAGCGGCGGCCGGCGGAACGGC
GGCGGAGTGCGCGGCGATATGCTGTTGCTTTCCGTGCGGTGTGATGAATCTTCTGATTTTGACAATCTACAAAGTGCCCGTCGGGATCTGCAAAAAGGTTTGGAATAAAC
AGAGGGGAAAACGGAAGAAAAATCAGGCGGTTAAGGCGGCGGCCGGTGCGGGGATTGAGTGGCCGGAGAATCGCGATCGGAGCGGAGAACCGTCGCTTCCGGCGTCGTAT
TTGTCGTCGGAGGATATGGAATTGGAAGAGGCGATGTGGGACAGATTTTACGGGACGGGATTCTGGAGAACGCCGTCGCAGAGAGAGGCGTAA
mRNA sequenceShow/hide mRNA sequence
GTGCAATTAATCCCTTTTCCTTTATTGGAACTTTTCTTCCGATTAATCGCATCCTCATCTATCTCTGTTCTTCAAGAACACCAACCATTTGTTTTCTCTCTTTTCCGATC
AGATCTTTTCACTTAAATTCACAGTGATTCAATTCAAATTCAAATTCAAATTATGAATGAGAGCGTCGTTTTCCGATCACCGCCGGGAACACGGCAGCAACCGCTGTTGA
GAAACAGAGTTAAGGAAAAACAGAGGTTCGCAGCGGCGGCCGGCGGAACGGCGGCGGAGTGCGCGGCGATATGCTGTTGCTTTCCGTGCGGTGTGATGAATCTTCTGATT
TTGACAATCTACAAAGTGCCCGTCGGGATCTGCAAAAAGGTTTGGAATAAACAGAGGGGAAAACGGAAGAAAAATCAGGCGGTTAAGGCGGCGGCCGGTGCGGGGATTGA
GTGGCCGGAGAATCGCGATCGGAGCGGAGAACCGTCGCTTCCGGCGTCGTATTTGTCGTCGGAGGATATGGAATTGGAAGAGGCGATGTGGGACAGATTTTACGGGACGG
GATTCTGGAGAACGCCGTCGCAGAGAGAGGCGTAATTGTACAGATTTTGGTTCTAACAATCAATGAGTTTTTTAGGGATCGTAATTACACGATGAAAAAGATCATCATAA
TCTTTTTTTCTTTTTTTTTCGATTTCTTTC
Protein sequenceShow/hide protein sequence
MNESVVFRSPPGTRQQPLLRNRVKEKQRFAAAAGGTAAECAAICCCFPCGVMNLLILTIYKVPVGICKKVWNKQRGKRKKNQAVKAAAGAGIEWPENRDRSGEPSLPASY
LSSEDMELEEAMWDRFYGTGFWRTPSQREA