CuGenDBv2

Gene ID	Sed0018427
Organism	Sechium edule (Chayote v1)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
Genome location	LG14:4002147..4005253
RNA-Seq Expression	Sed0018427
Synteny	Sed0018427
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604403.1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-104

85.78

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS    SPPV R SI ASSRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TG+KLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

KAG7034554.1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

6.1e-104

85.34

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS    SPPV R SI ASSRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  +ALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TG+KLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_022925930.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita moschata]

2.1e-104

85.78

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS P  SPPV R SI A SRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TG+KLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_022979097.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita maxima]

4.2e-105

86.21

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS P  SPPV R SI ASSRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEKDTG+KLRVLAQN+PVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_023543502.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo]

9.4e-105

86.21

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS P  SPPV R SI ASSRFSPPS+  PSH  T FT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE+RLKQEIADIEKDTG+KLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH91 Uncharacterized protein

6.6e-104

85.78

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPS--IPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS  +PSPP+ R    +SSRFSPPS  +PS + TDF+H  L LP KSLSFVLSGALALGI LSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPS--IPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQEIRLKQEIADIEKDTG+KLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGED+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1CRY9 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

2.3e-101

83.05

Show/hide

Query:  MAFMHL---LPSPSLSLP--KPSPPVSRP--SISASSRFSPPSIP--SHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPK
        MA +HL   LPS S+SLP  K SPP+  P  S+SASSRFSPPS P  +   T FT+W L  P KS SF LSGALALGIALSGVGF++AKVGVNKPELLPK
Subjt:  MAFMHL---LPSPSLSLP--KPSPPVSRP--SISASSRFSPPSIP--SHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA+IEKDTG+KLRVLAQNYPVTPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAG YGNI
Subjt:  EFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNI

Query:  FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED SIESAVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1EJL7 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

1.0e-104

85.78

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS P  SPPV R SI A SRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TG+KLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1HFT2 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

2.0e-100

83.55

Show/hide

Query:  MAFM----HLLPSPSLSLPKPSPPVSRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSV
        MAFM    HLLPSPSL   K SP VSR    + S  S PS PS +STD ++W LR P KSLSF LSGALALGI +SGVGF++A VGVNKPELLPKEFTSV
Subjt:  MAFM----HLLPSPSLSLPKPSPPVSRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSV

Query:  IDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKE
        IDVAGFLSDGQEIRLKQEIADIEKDTG+KLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVG SVDLDIPRSFWSRLAG YGNIFYWKE
Subjt:  IDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKE

Query:  KGEDASIESAVMAISNCLREPVGPNNCSEIK
        KGEDASIESAV+AISNCL+EPVGPNNCSEIK
Subjt:  KGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1IMV5 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

2.0e-105

86.21

Show/hide

Query:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS
        MAFMHL   LPSPSLS P  SPPV R SI ASSRFSPPS+  PSH+ TDFT+  L LP KSLSF LS  LALG+ALSGVGF++AKVGVNKPELLPKEFTS
Subjt:  MAFMHL---LPSPSLSLPKPSPPVSRPSISASSRFSPPSI--PSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEKDTG+KLRVLAQN+PVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAG YGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

SwissProt top hits

e value

%identity

Alignment

Q9LVV5 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic

1.6e-86

78.64

Show/hide

Query:  SRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKD
        S   +S+SSR S  +     S D  +W  R  SKSLS V SGALALG++LSGVGF++AKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKD
Subjt:  SRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKD

Query:  TGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKEKGEDASIESAVMAISNCLREPVGPN
        TGFKLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAG YGN+FYWKEKGEDASIE+AVMAIS+CLREPVG N
Subjt:  TGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKEKGEDASIESAVMAISNCLREPVGPN

Query:  NCSEIK
        NC+EI+
Subjt:  NCSEIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G52970.1 thylakoid lumen 15.0 kDa protein

1.1e-87

78.64

Show/hide

Query:  SRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKD
        S   +S+SSR S  +     S D  +W  R  SKSLS V SGALALG++LSGVGF++AKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKD
Subjt:  SRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKD

Query:  TGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKEKGEDASIESAVMAISNCLREPVGPN
        TGFKLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAG YGN+FYWKEKGEDASIE+AVMAIS+CLREPVG N
Subjt:  TGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKEKGEDASIESAVMAISNCLREPVGPN

Query:  NCSEIK
        NC+EI+
Subjt:  NCSEIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTTATGCATCTCCTTCCATCTCCATCTCTCTCCTTACCCAAACCTTCACCGCCGGTTTCCAGACCATCAATCTCCGCTTCATCTCGCTTCTCTCCGCCGTCGAT
TCCGTCTCATAGATCGACGGATTTCACCCACTGGTTTCTTCGTCTGCCCTCAAAATCTCTGAGTTTCGTTCTCTCTGGTGCTCTCGCGCTCGGAATAGCTCTCTCGGGAG
TTGGATTTTCGGAGGCTAAAGTTGGGGTTAACAAACCAGAATTGCTTCCCAAGGAATTCACATCTGTTATTGATGTCGCTGGATTTCTATCTGATGGCCAGGAAATTAGG
CTGAAACAAGAAATTGCTGACATTGAGAAGGATACAGGTTTTAAATTGCGAGTTTTGGCCCAAAATTATCCTGTGACACCAGGGTTGGCGATCAAAGATTTTTGGCAAGT
GGATGATAGAACAATTGTGTTTGTTGCCGACCCTACATTTGGTAACATATTGAACTTCAATGTCGGAGCGTCGGTGGATTTGGACATTCCACGGAGCTTTTGGAGCCGCT
TGGCCGGAACGTATGGAAACATATTTTACTGGAAAGAGAAGGGTGAAGATGCATCGATTGAATCAGCTGTTATGGCAATTTCTAATTGCTTGAGAGAACCAGTTGGCCCA
AATAACTGTTCCGAGATAAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFMHLLPSPSLSLPKPSPPVSRPSISASSRFSPPSIPSHRSTDFTHWFLRLPSKSLSFVLSGALALGIALSGVGFSEAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIR
LKQEIADIEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGTYGNIFYWKEKGEDASIESAVMAISNCLREPVGP
NNCSEIK

Sed0018427 (gene) of Chayote v1 genome