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Sed0018432 (gene) of Chayote v1 genome

Gene IDSed0018432
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:5439506..5441408
RNA-Seq ExpressionSed0018432
SyntenySed0018432
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577123.1 hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2371.43Show/hide
Query:  MVSMAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        M SMAAF  F FIFL+FT PN G AD  L+LKEGLK+P+ CG+V VE NKV RKLLG EE+ DYASP++NRRHEPRIG+PGGRA
Subjt:  MVSMAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

KAG6600409.1 hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2271.43Show/hide
Query:  MVSMAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        M SMAAFK FIFIFL+F  PN GDAD  L LKEGLK+P+ CG+VI+E  K  RKLLG EE LDYASP +N RHEPR+GNPGGRA
Subjt:  MVSMAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

KAG6600410.1 hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0444.19Show/hide
Query:  MAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWL-DYASPDYNRRHEPRIGNPGGRASANP
        MA+    IF FLIFTSP+ G A       +  + P+   + I     V RK+LG++  L DY  P  N  HEPR G+PGGRAS NP
Subjt:  MAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWL-DYASPDYNRRHEPRIGNPGGRASANP

KGN53437.1 hypothetical protein Csa_015314 [Cucumis sativus]6.8e-1970.24Show/hide
Query:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        MAAF K FIFIFL IF  PN GDA  DLSLK+GLK+ + CG++IVE  NKV RKLLG E + DYASPD+N RHEPR GNPGGRA
Subjt:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

TYK16509.1 hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa]3.4e-1869.05Show/hide
Query:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        MAAF K FIFIFL IFT P+ GDA  DLSLK+GLK+ + CG++IVE  N+V RKLLG E  LDYASPD+N RHEPR G+PGGRA
Subjt:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

TrEMBL top hitse value%identityAlignment
A0A0A0KYH7 Uncharacterized protein3.3e-1970.24Show/hide
Query:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        MAAF K FIFIFL IF  PN GDA  DLSLK+GLK+ + CG++IVE  NKV RKLLG E + DYASPD+N RHEPR GNPGGRA
Subjt:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

A0A5D3D203 Uncharacterized protein1.6e-1869.05Show/hide
Query:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA
        MAAF K FIFIFL IFT P+ GDA  DLSLK+GLK+ + CG++IVE  N+V RKLLG E  LDYASPD+N RHEPR G+PGGRA
Subjt:  MAAF-KAFIFIFL-IFTSPNLGDADCDLSLKEGLKVPSSCGKVIVE-INKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCCATGGCTGCCTTCAAGGCCTTCATTTTCATCTTCCTCATCTTCACTTCCCCTAATTTAGGGGATGCTGATTGTGACCTGAGCTTGAAGGAGGGCTTGAAGGT
ACCAAGCTCTTGTGGGAAGGTGATAGTTGAAATTAATAAAGTGAATAGAAAGCTTTTGGGGGTAGAAGAATGGTTAGACTATGCAAGCCCAGACTATAACAGAAGACATG
AGCCAAGGATTGGGAACCCTGGGGGAAGAGCAAGTGCCAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
CCCAACTTCACTTAAATTAAAATTCACCCCCAATCAACCTTTGATCCTTCAACAAAATGGTGTCCATGGCTGCCTTCAAGGCCTTCATTTTCATCTTCCTCATCTTCACT
TCCCCTAATTTAGGGGATGCTGATTGTGACCTGAGCTTGAAGGAGGGCTTGAAGGTACCAAGCTCTTGTGGGAAGGTGATAGTTGAAATTAATAAAGTGAATAGAAAGCT
TTTGGGGGTAGAAGAATGGTTAGACTATGCAAGCCCAGACTATAACAGAAGACATGAGCCAAGGATTGGGAACCCTGGGGGAAGAGCAAGTGCCAATCCTTAAAGTGATG
GTGAAATTAGGGTTTCAAAAACTTCAACTTGAGAGTGAGACTATGATATCCTTTTGTGAAAAGAGTTTTATTGATTATGAATGTGTG
Protein sequenceShow/hide protein sequence
MVSMAAFKAFIFIFLIFTSPNLGDADCDLSLKEGLKVPSSCGKVIVEINKVNRKLLGVEEWLDYASPDYNRRHEPRIGNPGGRASANP