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Sed0018448 (gene) of Chayote v1 genome

Gene IDSed0018448
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:18450875..18451123
RNA-Seq ExpressionSed0018448
SyntenySed0018448
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53741.1 hypothetical protein Csa_015371 [Cucumis sativus]9.2e-1060Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPRE
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP E
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPRE

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]1.1e-1563.75Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE  +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]2.9e-1665Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE  +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]5.9e-1766.25Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I RL QV+++L+DR+ER+E+ALGN QGRE   N EGVENE  +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]9.2e-1058.97Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPR
        M+Q   D  E SEAR+REAQ GVI RLT+VV SL DR+ERMEVAL NPQ  E   N E  +NE  +DN  LL G N R
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPR

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein1.7e-0956.96Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPR
        MN+  ++  +ISEA+  EAQ G I RLTQV+N L++RL+RMEVAL N  QG   N   EGVENE  EDN   LAG NPR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPR

A0A0A0L0S3 Uncharacterized protein4.4e-1060Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPRE
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP E
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENENGEDNVNLLAGYNPRE

A0A6J1EHL9 uncharacterized protein LOC1114326155.4e-1663.75Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE  +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG

A0A6J1ETN1 uncharacterized protein LOC1114364101.4e-1665Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE  +DNV LLAG++PR G
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAAATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGAGGGAGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAAATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGAGGGAGAGTTTTAG
Protein sequenceShow/hide protein sequence
MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENENGEDNVNLLAGYNPREGEF