CuGenDBv2

Gene ID	Sed0018454
Organism	Sechium edule (Chayote v1)
Description	translocator protein homolog
Genome location	LG02:48846211..48846708
RNA-Seq Expression	Sed0018454
Synteny	Sed0018454
Gene Ontology terms	GO:0018216 - peptidyl-arginine methylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-63

78.53

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LD  TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]

2.2e-63

78.53

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LD  TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

5.8e-64

79.14

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LDF TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

2.9e-63

78.53

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LD  TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]

5.3e-65

79.14

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PLSL++AVI LFG   RHFP R+RP W+ PLWLLHL+S+ S+ L+GLAAWLVWADGGFHG SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+R+ + AFLFC+LDF TLFACYRTFKRVNPFAKDLIKPCL WTAYLSAVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DTF2 translocator protein homolog

3.8e-61

74.85

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+P+SL++AVI LFG   RHFP R+RP W+ PLWLL L+S+ S+ L+GLAAWLVWADGGFHG SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        W+PL+LV+R+ + AFLFC+LDF TLFACYR F+RVNPFAKDL+KPCL WTAYLSAVT+ FI L
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

A0A5D3CWC4 Translocator protein-like protein

3.8e-61

74.85

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+P+SL++AVI LFG   RHFP R+RP W+ PLWLL L+S+ S+ L+GLAAWLVWADGGFHG SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        W+PL+LV+R+ + AFLFC+LDF TLFACYR F+RVNPFAKDL+KPCL WTAYLSAVT+ FI L
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

A0A6J1CCG7 translocator protein homolog

1.5e-60

76.54

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLF--GRHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLVW
        SRPESK+ KAKRALRSLAVSVA+PLSL++ VI LF  GRHFP RSRP W+APLW LHL+S+ S+ L+GL+AWLVWADGGFHG S ALPLYIAHL+L +VW
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLF--GRHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLVW

Query:  NPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        NPL+LV+RA L AFLFC+LDF TLFACYR+FKRVNPFAKDLIKPCL  TAYLSAVT+  I L
Subjt:  NPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

A0A6J1FZS9 translocator protein homolog

1.1e-63

78.53

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LD  TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

A0A6J1ICB9 translocator protein homolog

2.8e-64

79.14

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Query:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV
        SRPESK+ KAKRALRSLAVSVA+PL+L++AVI LFG   RHFP R+RP WVAPLWLLHL+S++S+ L+GLAAWLVWADGGFH  SNALPLYIAHLSL +V
Subjt:  SRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFG---RHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLV

Query:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL
        WNPL+LV+RA L AFLFC+LDF TL+ACYRTFKRVNPFAKDLIKPCL WTAYL AVT+ FIDL
Subjt:  WNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

SwissProt top hits

e value

%identity

Alignment

O82245 Translocator protein homolog

2.0e-27

42.41

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Query:  SSSRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFGRHFPIRSR---PAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLG
        +  + + K A AKR L+SL V+VA P+ ++L      G      +R    +W+ PLWLLH   LAS+ L+GLAAWLVW DGGFH   NAL LY+A   L 
Subjt:  SSSRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFGRHFPIRSR---PAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLG

Query:  LVWNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAV
        LVW+P+   + + +      L     LF CY+ F  ++P A +L+KPCL W A+++AV
Subjt:  LVWNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAV

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

1.4e-28

42.41

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Query:  SSSRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFGRHFPIRSR---PAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLG
        +  + + K A AKR L+SL V+VA P+ ++L      G      +R    +W+ PLWLLH   LAS+ L+GLAAWLVW DGGFH   NAL LY+A   L 
Subjt:  SSSRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFGRHFPIRSR---PAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLG

Query:  LVWNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAV
        LVW+P+   + + +      L     LF CY+ F  ++P A +L+KPCL W A+++AV
Subjt:  LVWNPLLLVLRAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAV

Sequences

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CDS sequence

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ATGGCGTCTTCTTCTTCGAGACCAGAATCCAAGCACGCCAAGGCCAAGCGGGCGCTCCGATCCCTCGCCGTCTCCGTCGCCGTCCCTCTCTCCCTCTCCCTCGCCGTCAT
CCTCCTCTTCGGCCGCCATTTCCCCATCCGGAGCCGCCCGGCCTGGGTGGCGCCGCTCTGGCTCCTCCACCTCGCCTCCCTCGCCTCCGCCTCCCTCCTCGGCCTCGCCG
CCTGGCTCGTATGGGCCGACGGCGGCTTCCACGGCGCCTCCAACGCCCTCCCGCTCTACATCGCCCACCTCTCCCTCGGCCTCGTCTGGAATCCTCTCCTTCTCGTGCTT
CGCGCTCCTCTGTTCGCCTTTCTGTTCTGCCTTTTGGATTTCGGTACTCTCTTCGCTTGTTATCGGACCTTCAAGCGCGTCAATCCCTTCGCCAAGGATCTGATCAAGCC
TTGCCTGGTCTGGACCGCTTATCTCTCTGCTGTTACTTTTTTCTTTATTGATCTTTGA

mRNA sequence

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Protein sequence

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MASSSSRPESKHAKAKRALRSLAVSVAVPLSLSLAVILLFGRHFPIRSRPAWVAPLWLLHLASLASASLLGLAAWLVWADGGFHGASNALPLYIAHLSLGLVWNPLLLVL
RAPLFAFLFCLLDFGTLFACYRTFKRVNPFAKDLIKPCLVWTAYLSAVTFFFIDL

Sed0018454 (gene) of Chayote v1 genome