CuGenDBv2

Gene ID	Sed0018471
Organism	Sechium edule (Chayote v1)
Description	protein TAPETUM DETERMINANT 1-like
Genome location	LG10:6546788..6547907
RNA-Seq Expression	Sed0018471
Synteny	Sed0018471
Gene Ontology terms	GO:0001709 - cell fate determination (biological process)
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026827.1 hypothetical protein SDJN02_10834, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.2e-43

73.17

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA  A+L  ALLFVS + KGN Q C L N+T+ Q MTGFQIHGMTEWN T+SN C+C QS+VKLDC GFQTTESIDP ILAI+ T+CLVN+GLPIFNS P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITFTYAQ+PQFNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.2e-43

70.73

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA   KLF ALLFVSL+ KGNCQ C  +++ ++Q+MTGFQIHGMTEWNVTISNNC+C QS+VKLDC GFQTT+SIDPSILA++ T+CLVN+GLPIF S P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        + FTYAQDP+F+F+ I SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]

1.4e-41

70.73

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA+  KL  ALL +S IS GNCQ C L+N+T++Q+MTGFQIHGMTEW+VTI+NNCIC QS +KLDC GF TT SIDPSIL+IS  +CLVN+G PIFNSKP
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITF YAQ P+FNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]

2.2e-44

74.8

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA  AKLF ALLFVS +SK N Q C L N+T+ Q MTGFQIHGMTEWN T+SNNC+C QS+VKLDC GFQTT+SIDP ILAI+ T+CLVN+GLPIFNS P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITFTYAQ+PQFNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]

4.1e-46

75.61

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA+  KL TALL +SL+S GNCQ C L+N+T++QRMTGFQIHGMTEW VTISNNC C QS+VK+DC GFQTTESIDPSILA+  T+CLVN+GLPIFNS P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITF+YAQDPQFNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLZ6 Uncharacterized protein

9.5e-41

69.11

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        M +  KL  ALL +SLIS GNCQ C L+N+ ++Q MTGFQIHGMTEW VTI+NNCIC QS +KLDC GF TT SIDPSILAIS ++CLVN+G PIFNS+P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITF YAQ P+FNF+P+ SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like

6.6e-42

70.73

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA+  KL  ALL +S IS GNCQ C L+N+T++Q+MTGFQIHGMTEW+VTI+NNCIC QS +KLDC GF TT SIDPSIL+IS  +CLVN+G PIFNSKP
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITF YAQ P+FNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like

6.6e-42

70.73

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA+  KL  ALL +S IS GNCQ C L+N+T++Q+MTGFQIHGMTEW+VTI+NNCIC QS +KLDC GF TT SIDPSIL+IS  +CLVN+G PIFNSKP
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITF YAQ P+FNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

A0A6J1HGA0 uncharacterized protein At1g05835-like

1.1e-44

74.8

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA  AKLF ALLFVS +SK N Q C L N+T+ Q MTGFQIHGMTEWN T+SNNC+C QS+VKLDC GFQTT+SIDP ILAI+ T+CLVN+GLPIFNS P
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITFTYAQ+PQFNF+PI SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like

2.8e-40

68.29

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA  AKLF ALLFVSL+ KGNCQ C  +++ + Q M+GFQIHGMTEWNVTISN C+C QS+VKLDC GFQTT+SIDPS+LA++ ++CLVN+GLPIF S  
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQIVCS
        ITFTYA DP+F+F+ I SQI CS
Subjt:  ITFTYAQDPQFNFEPIFSQIVCS

SwissProt top hits

e value

%identity

Alignment

A8MS78 Uncharacterized protein At1g05835

1.4e-04

30.86

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Query:  EWNVTISNNC-ICYQSKVKLDCTGFQTTESIDPS---ILAISGTQCLVNDGLPIFNSKPITFTYAQDPQFNFEPIFSQIVC
        ++ V + N C +C    ++L C GF  +  +DP+   +L+ S   C+VNDGLP+   + ++F Y+   QF   P+     C
Subjt:  EWNVTISNNC-ICYQSKVKLDCTGFQTTESIDPS---ILAISGTQCLVNDGLPIFNSKPITFTYAQDPQFNFEPIFSQIVC

Arabidopsis top hits

e value

%identity

Alignment

AT1G05835.1 PHD finger protein

9.8e-06

30.86

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Query:  EWNVTISNNC-ICYQSKVKLDCTGFQTTESIDPS---ILAISGTQCLVNDGLPIFNSKPITFTYAQDPQFNFEPIFSQIVC
        ++ V + N C +C    ++L C GF  +  +DP+   +L+ S   C+VNDGLP+   + ++F Y+   QF   P+     C
Subjt:  EWNVTISNNC-ICYQSKVKLDCTGFQTTESIDPS---ILAISGTQCLVNDGLPIFNSKPITFTYAQDPQFNFEPIFSQIVC

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

1.5e-14

34.17

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Query:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP
        MA   K F  +L +S++S G C  C+   + +    TG +I G  EW VT+ N C C+Q  V L C GF   + + P +L   G  CL+  G  +     
Subjt:  MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKP

Query:  ITFTYAQDPQFNFEPIFSQI
          FTYA  P + F P+ S++
Subjt:  ITFTYAQDPQFNFEPIFSQI

Sequences

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CDS sequence

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ATGGCTCTCTTGGCGAAGCTTTTCACAGCACTTCTTTTCGTCTCTCTTATTTCCAAAGGAAATTGTCAACCATGTTCTCTTCACAACTTAACACTCAACCAAAGAATGAC
AGGGTTTCAAATTCATGGAATGACTGAATGGAATGTGACAATTAGCAACAATTGCATTTGTTATCAATCAAAAGTAAAACTTGATTGCACAGGATTTCAAACTACAGAAA
GTATTGACCCTTCCATCTTAGCCATTTCTGGAACCCAATGTTTGGTCAATGATGGGCTCCCAATTTTCAATTCCAAACCCATTACCTTCACTTATGCACAAGACCCTCAA
TTTAATTTCGAGCCAATTTTTTCCCAAATTGTTTGTTCTTAA

mRNA sequence

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Protein sequence

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MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKPITFTYAQDPQ
FNFEPIFSQIVCS

Sed0018471 (gene) of Chayote v1 genome