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Sed0018474 (gene) of Chayote v1 genome

Gene IDSed0018474
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:3185449..3186124
RNA-Seq ExpressionSed0018474
SyntenySed0018474
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595182.1 hypothetical protein SDJN03_11735, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4866.87Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV
        MGNC+ ++  PIRIMK DGK+LEYKSP +VFQVLS F+GHAI+DAVP THHLQ    LLSG LYFL+PTA       + KKAVRFA EPEKE    G   
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV

Query:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATE-DDEFQKWKPVLQTIPETEV
        G+V+RIKVV+TKKEL+EMV+RGGITA+EMICKIKSGS E  IS TE D+E  KW+P LQ+IPE+EV
Subjt:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATE-DDEFQKWKPVLQTIPETEV

KAG7027198.1 hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-4966.87Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV
        MGNC+ ++  PIRIMK DGK+LEYKSP +VFQVLS F+GHAI+DAVP THHLQ    LLSG LYFL+PTA       + KKAVRFA EPEKE    G   
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV

Query:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATE-DDEFQKWKPVLQTIPETEV
        G+V+RIKVV+TKKEL+EMV+RGGITA+EMICKIKSGS E  IS TE D+E  KW+P LQ+IPE+EV
Subjt:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATE-DDEFQKWKPVLQTIPETEV

XP_022972617.1 uncharacterized protein LOC111471158 [Cucurbita maxima]2.6e-4864.71Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV
        MGNC+ +E KPIRIMK DGK+LEYKSP +VFQVLS F+GHAI+DAVP THHL+    LLSG LYFL+PTA       + KKAVRFA EPEKE    G   
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV

Query:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD-EFQKWKPVLQTIPETEV
        G+V+RIKVV+TKKEL+EMV+RGGITA+EMICKIKSG    SC ++    EDD E  KW+P LQ+IPE+EV
Subjt:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD-EFQKWKPVLQTIPETEV

XP_022977419.1 uncharacterized protein LOC111477765 [Cucurbita maxima]6.9e-4962.5Show/hide
Query:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR
        NC+F++ KPIRIMKTDGK+LEYKSP +VFQVLS F+GH I+DAVP + HL   A LL+G LYFL+PT     K KK VRFA+  ++E  +NG   GRVVR
Subjt:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR

Query:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV
        IK+V+TKKELQEMV+RGGI+ +EM+CKIKSGS E   +  E+ E Q+WKP LQ+IPE+EV
Subjt:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV

XP_023544756.1 uncharacterized protein LOC111804252 [Cucurbita pepo subsp. pepo]1.5e-4863.25Show/hide
Query:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPT-AVDPPKKKKAVRFAEEPEKED-----EDNGDR
        NC+F++ KPIRIMKTDGK+LEYKSP +VFQVLS F+GH I+DAVP + HL   A LL+G LYFL+PT A +   KKK VRFAE  ++E       +NG  
Subjt:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPT-AVDPPKKKKAVRFAEEPEKED-----EDNGDR

Query:  VGRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV
         GRVVRIK+V+TKKELQEMV+RGGI+ +EMICKIKSGS E   +  E+DE Q+WKP LQTIPE+EV
Subjt:  VGRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV

TrEMBL top hitse value%identityAlignment
A0A0A0KHH5 Uncharacterized protein4.1e-4762.21Show/hide
Query:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR
        NC+F++ KPIRIMKTDGK+LEYKSP +VFQVLS F+GH I+DAVP +HHL   A LLSG LYFL+P   +  K KKAVRFA EPEKE    G     VVR
Subjt:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR

Query:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISAT------------EDDEFQKWKPVLQTIPETEV
        IKVV+TKKELQEMV+RGGI+AEEMICKIK+G C +I S +            E+ E Q+WKPVL++IPE+EV
Subjt:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISAT------------EDDEFQKWKPVLQTIPETEV

A0A1S3CHA7 uncharacterized protein LOC1035009002.0e-4662.35Show/hide
Query:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR
        NC+F++ KPIRIMKTDGK+LEYKSP +VFQVLS F+GH I+DAVP THHL   A LLSG LYFL+P      K KKAVRFA EPEKE   +    G VVR
Subjt:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR

Query:  IKVVVTKKELQEMVQRGGITAEEMICKIKSG----------SCEQIISATEDDEFQKWKPVLQTIPETEV
        IKVV+TKKELQEMV+RGGI+AEEMICKIK+G            E+     E+ E Q+WKPVL++IPE+EV
Subjt:  IKVVVTKKELQEMVQRGGITAEEMICKIKSG----------SCEQIISATEDDEFQKWKPVLQTIPETEV

A0A6J1HG15 uncharacterized protein LOC1114632308.3e-4862.79Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV
        MGNC+ ++  PIRIMK DGK+LEYKSP +VFQVLS F+GHAI+DAVP THHLQ    LLSG LYFL+PTA       + KKAVRFA EPEKE    G   
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV

Query:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD---EFQKWKPVLQTIPETEV
        G+V+RIKVV+TKKEL+EMV+RGGITA+EMICKIKSG    SC ++    +DD   E  KW+P LQ+IPE+EV
Subjt:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD---EFQKWKPVLQTIPETEV

A0A6J1I5B2 uncharacterized protein LOC1114711581.3e-4864.71Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV
        MGNC+ +E KPIRIMK DGK+LEYKSP +VFQVLS F+GHAI+DAVP THHL+    LLSG LYFL+PTA       + KKAVRFA EPEKE    G   
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTA---VDPPKKKKAVRFAEEPEKEDEDNGDRV

Query:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD-EFQKWKPVLQTIPETEV
        G+V+RIKVV+TKKEL+EMV+RGGITA+EMICKIKSG    SC ++    EDD E  KW+P LQ+IPE+EV
Subjt:  GRVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSG----SCEQIISATEDD-EFQKWKPVLQTIPETEV

A0A6J1IRC0 uncharacterized protein LOC1114777653.4e-4962.5Show/hide
Query:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR
        NC+F++ KPIRIMKTDGK+LEYKSP +VFQVLS F+GH I+DAVP + HL   A LL+G LYFL+PT     K KK VRFA+  ++E  +NG   GRVVR
Subjt:  NCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVR

Query:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV
        IK+V+TKKELQEMV+RGGI+ +EM+CKIKSGS E   +  E+ E Q+WKP LQ+IPE+EV
Subjt:  IKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64700.1 unknown protein1.6e-0638.55Show/hide
Query:  MGNCIF------MEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPAT-HHLQHAATLLSGRLYFLVPTAVDPPKK
        MGNC+F       E   I+++K+DG VLE+ SP     V  GF+GHA+  AV      L H   L+ G+ Y+L P  V    K
Subjt:  MGNCIF------MEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPAT-HHLQHAATLLSGRLYFLVPTAVDPPKK

AT3G10120.1 unknown protein1.4e-2338.67Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGH-AIADAVPATHHLQHAATLLSGRLYFLVPTAVDP----PKKKKAVRFAE---EPEKEDED
        MGNC+ ME K I+IM+ DGKV+EY+ P KV  +L+ F+ H ++ D++    HL   A LL GRLY+L+P   +      K  K VRFA    E E+++ED
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGH-AIADAVPATHHLQHAATLLSGRLYFLVPTAVDP----PKKKKAVRFAE---EPEKEDED

Query:  --------NGDRVGRVVRIKVVVTKKELQEMVQRGGITAEEMICK--IKSGSCEQIISATEDDEFQK--WKPVLQTIPETE
                  ++   VVR+K+VV+K+EL++++Q G +   EM+ +   K   C+      +DDE  K  W+P+L +IPET+
Subjt:  --------NGDRVGRVVRIKVVVTKKELQEMVQRGGITAEEMICK--IKSGSCEQIISATEDDEFQK--WKPVLQTIPETE

AT3G21680.1 unknown protein1.0e-0537.5Show/hide
Query:  EKEDEDNGDRVGRVVRIKVVVTKKELQEMV-QRGGITAEEMICKIKSGSCEQIISAT-EDDEFQK----WKPVLQTIPET
        E+E E + +   +VVRIKVVVTKKEL++++  + GI + + +  +   S   I  A+ E+DE ++    W+P L++IPE+
Subjt:  EKEDEDNGDRVGRVVRIKVVVTKKELQEMV-QRGGITAEEMICKIKSGSCEQIISAT-EDDEFQK----WKPVLQTIPET

AT4G21920.1 unknown protein1.5e-0440.62Show/hide
Query:  IKVVVTKKELQEMVQRGG---ITAEEMICKIKSGSCEQIISATED--DEFQKWKPVLQTIPETE
        IK+ +TKKEL+++++  G   +TAEE++ K+     +QI  +  D  +  Q WKPVLQ+IPE +
Subjt:  IKVVVTKKELQEMVQRGG---ITAEEMICKIKSGSCEQIISATED--DEFQKWKPVLQTIPETE

AT5G03890.1 unknown protein3.1e-2338.12Show/hide
Query:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFA-----------EEPEKE
        MGNC+ ME K I+I++ DGKVLEY+ P  V  +L+ F+GH+I+       HL   A LLSGRLY+L+PT +   K  K V FA            E E  
Subjt:  MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFA-----------EEPEKE

Query:  DEDNGDRVG------RVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQ---KWKPVLQTIPETE
         E N +  G       VVR+K+VV K+EL++++Q GG   E M   ++    + ++++++DD+ +    W+P L +IPE+E
Subjt:  DEDNGDRVG------RVVRIKVVVTKKELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQ---KWKPVLQTIPETE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGTATATTCATGGAGGCAAAGCCCATAAGAATAATGAAAACCGACGGCAAAGTCCTGGAATACAAATCCCCAGCAAAGGTCTTCCAAGTCCTCTCCGGTTT
CACCGGCCACGCCATCGCGGACGCCGTGCCGGCCACCCACCATCTCCAGCATGCCGCCACCCTCCTCTCCGGCCGCCTCTACTTCCTCGTCCCCACCGCGGTCGATCCCC
CGAAGAAAAAGAAGGCGGTCCGGTTCGCGGAGGAACCGGAGAAGGAAGACGAAGATAATGGCGACCGGGTCGGGCGAGTGGTGAGGATAAAGGTGGTGGTCACGAAGAAG
GAGCTGCAAGAGATGGTTCAAAGAGGGGGAATCACAGCAGAGGAAATGATATGTAAGATCAAAAGTGGGAGTTGTGAACAAATTATTAGTGCTACAGAAGATGATGAGTT
CCAGAAATGGAAACCTGTTCTTCAAACTATACCAGAAACTGAAGTTCCTAATTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAATGGGGAACTGTATATTCATGGAGGCAAAGCCCATAAGAATAATGAAAACCGACGGCAAAGTCCTGGAATACAAATCCCCAGCAAAGGTCTTCCAAGTCCTCTCCGG
TTTCACCGGCCACGCCATCGCGGACGCCGTGCCGGCCACCCACCATCTCCAGCATGCCGCCACCCTCCTCTCCGGCCGCCTCTACTTCCTCGTCCCCACCGCGGTCGATC
CCCCGAAGAAAAAGAAGGCGGTCCGGTTCGCGGAGGAACCGGAGAAGGAAGACGAAGATAATGGCGACCGGGTCGGGCGAGTGGTGAGGATAAAGGTGGTGGTCACGAAG
AAGGAGCTGCAAGAGATGGTTCAAAGAGGGGGAATCACAGCAGAGGAAATGATATGTAAGATCAAAAGTGGGAGTTGTGAACAAATTATTAGTGCTACAGAAGATGATGA
GTTCCAGAAATGGAAACCTGTTCTTCAAACTATACCAGAAACTGAAGTTCCTAATTCTTAGCTAAATTACTTCCTTTTTTAGTTTAGTTTAAGGCTATACAAAGTCTAAG
TGTAACAAAACTTTGAAACATGATGAGAAAGTTACAATTGTGTTTTTAATCTCATGCTTTTACTTATCCAATAGTAATCAAATGCTTGATAAGAGGGGATGTTGCATGTA
TAATATAAATAACCAA
Protein sequenceShow/hide protein sequence
MGNCIFMEAKPIRIMKTDGKVLEYKSPAKVFQVLSGFTGHAIADAVPATHHLQHAATLLSGRLYFLVPTAVDPPKKKKAVRFAEEPEKEDEDNGDRVGRVVRIKVVVTKK
ELQEMVQRGGITAEEMICKIKSGSCEQIISATEDDEFQKWKPVLQTIPETEVPNS