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Sed0018489 (gene) of Chayote v1 genome

Gene IDSed0018489
OrganismSechium edule (Chayote v1)
Descriptiongibberellin-regulated protein 9
Genome locationLG03:4097163..4099736
RNA-Seq ExpressionSed0018489
SyntenySed0018489
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138815.1 gibberellin-regulated protein 9 [Cucumis sativus]1.1e-4280.73Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLSLLCI I+L FL+QGFSEA     +VDEGT TVALTKK+HY PKINCK  CSRRCSK  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

XP_008441216.1 PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]4.1e-4279.82Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLSLLCI I+L FL+QGFSEA    T+VD GT TVAL+KK+HY PKINCK  CSRRCSK  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

XP_022152524.1 gibberellin-regulated protein 9 [Momordica charantia]9.6e-3973.39Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKP+S L I +LLLFL+Q  SEAS S+++V++G+  VA+ KKH   PKINCK ACSRRC KASRKKICMRACG+CCSRCHCVPPGT GNHQ CPCYARLK
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

XP_023550961.1 gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]4.7e-3874.31Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLS+LC  +LLL  +QG SEA   FT+V+EGT T AL KKH Y PKINCK ACSRRC K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+ KCP
Subjt:  THHNQPKCP

XP_038885058.1 gibberellin-regulated protein 9-like [Benincasa hispida]1.7e-4382.57Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLSLLCI I+L  L+QGFSEA   FT+VDEGT TVALTKK+HY PKINCK  CSRRCSK  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARLK
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LMS4 Uncharacterized protein5.3e-4380.73Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLSLLCI I+L FL+QGFSEA     +VDEGT TVALTKK+HY PKINCK  CSRRCSK  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

A0A1S3B2G6 gibberellin-regulated protein 92.0e-4279.82Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLSLLCI I+L FL+QGFSEA    T+VD GT TVAL+KK+HY PKINCK  CSRRCSK  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

A0A6J1DG94 gibberellin-regulated protein 94.6e-3973.39Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKP+S L I +LLLFL+Q  SEAS S+++V++G+  VA+ KKH   PKINCK ACSRRC KASRKKICMRACG+CCSRCHCVPPGT GNHQ CPCYARLK
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+PKCP
Subjt:  THHNQPKCP

A0A6J1FFC2 gibberellin-regulated protein 93.0e-3874.31Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLS+LC  +LLL  +QG SEA   FT+V+EGT T AL KKH Y PKINCK ACSRRC K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+ KCP
Subjt:  THHNQPKCP

A0A6J1JZB3 gibberellin-regulated protein 9-like3.9e-3874.31Show/hide
Query:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK
        MKPLS+LC  +LLL  +QG SEAS   T+V+EGT T AL KKH Y PKINCK ACSRRC K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+
Subjt:  MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLK

Query:  THHNQPKCP
        TH N+ KCP
Subjt:  THHNQPKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 112.2e-1758.73Show/hide
Query:  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP
        PKI+C   C  RCS +SR  +C RACGTCC+RC+CV PGT+GN+  CPCY  L TH  + KCP
Subjt:  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP

P46688 Gibberellin-regulated protein 21.6e-1761.29Show/hide
Query:  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP
        KI+C   C  RCSK+SR K+C+RAC +CCSRC+CVPPGT+GN   CPCYA + TH  + KCP
Subjt:  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP

P46689 Gibberellin-regulated protein 11.1e-1645.28Show/hide
Query:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH
        ++ L IS+L+L L+Q   E S                KK+ Y  KI+C  AC  RC  + R ++C RACGTCC RC+CVPPGT GN+  C CYA L TH 
Subjt:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH

Query:  NQPKCP
         + KCP
Subjt:  NQPKCP

Q8GWK5 Gibberellin-regulated protein 92.8e-2549.06Show/hide
Query:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH
        +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK SRKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH 
Subjt:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH

Query:  NQPKCP
        N+ KCP
Subjt:  NQPKCP

Q93X17 Snakin-21.1e-1845.63Show/hide
Query:  LCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQP
        L +S+LLL  +Q             +  T+ A+++  +   KI+C  AC+ RC  +SR ++C RACGTCC+RC+CVPPGT+GN + CPCYA L TH N+ 
Subjt:  LCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQP

Query:  KCP
        KCP
Subjt:  KCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein2.0e-2649.06Show/hide
Query:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH
        +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK SRKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH 
Subjt:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH

Query:  NQPKCP
        N+ KCP
Subjt:  NQPKCP

AT1G22690.2 Gibberellin-regulated family protein2.0e-2649.06Show/hide
Query:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH
        +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK SRKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH 
Subjt:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH

Query:  NQPKCP
        N+ KCP
Subjt:  NQPKCP

AT1G22690.3 Gibberellin-regulated family protein2.0e-2649.06Show/hide
Query:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH
        +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK SRKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH 
Subjt:  LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHH

Query:  NQPKCP
        N+ KCP
Subjt:  NQPKCP

AT2G18420.1 Gibberellin-regulated family protein1.5e-1858.73Show/hide
Query:  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP
        PKI+C   C  RCS +SR  +C RACGTCC+RC+CV PGT+GN+  CPCY  L TH  + KCP
Subjt:  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP

AT4G09610.1 GAST1 protein homolog 21.2e-1861.29Show/hide
Query:  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP
        KI+C   C  RCSK+SR K+C+RAC +CCSRC+CVPPGT+GN   CPCYA + TH  + KCP
Subjt:  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCTAAGTCTTCTTTGCATTTCTATTCTCCTTCTCTTTCTCATGCAGGGGTTTTCAGAGGCTTCCTCATCTTTCACTTCTGTGGATGAAGGGACTACAACGGT
AGCTCTCACCAAAAAACATCATTATCTTCCGAAAATCAATTGCAAAGAAGCATGCTCAAGGCGATGCAGCAAAGCGTCAAGGAAGAAGATATGCATGCGCGCCTGTGGAA
CATGCTGCAGCCGCTGCCACTGTGTCCCGCCCGGCACCAACGGCAACCACCAAGCCTGCCCTTGCTACGCTCGCCTCAAGACCCACCACAATCAGCCCAAGTGCCCCTAA
mRNA sequenceShow/hide mRNA sequence
CATTTGTGTTCATCTATCAAAATTATTTGGGCATATCTTCTTAAGAAATGAAGCCTCTAAGTCTTCTTTGCATTTCTATTCTCCTTCTCTTTCTCATGCAGGGGTTTTCA
GAGGCTTCCTCATCTTTCACTTCTGTGGATGAAGGGACTACAACGGTAGCTCTCACCAAAAAACATCATTATCTTCCGAAAATCAATTGCAAAGAAGCATGCTCAAGGCG
ATGCAGCAAAGCGTCAAGGAAGAAGATATGCATGCGCGCCTGTGGAACATGCTGCAGCCGCTGCCACTGTGTCCCGCCCGGCACCAACGGCAACCACCAAGCCTGCCCTT
GCTACGCTCGCCTCAAGACCCACCACAATCAGCCCAAGTGCCCCTAAATTTTACATTTATATTTGGTGCTGGTTTTATGGTACTTTTATTGACATTTACTCATTTTAAAT
GCTAATAATGTGCTTAAATATCTAAATTCGGTGGTTTCAGTTGCTTATTATTTGAATAAACATAACGAGCCTTTTAATTTTCA
Protein sequenceShow/hide protein sequence
MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP