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Sed0018521 (gene) of Chayote v1 genome

Gene IDSed0018521
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:44611701..44614757
RNA-Seq ExpressionSed0018521
SyntenySed0018521
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045945.1 uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa]3.2e-5383.97Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHSNA  TNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESM IDS+VPQ SSDRELELGEIYFLIPL KAHLPISLT LC+LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALA+SKKA+ SL+AAPTAV +     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

KGN61812.2 hypothetical protein Csa_006308 [Cucumis sativus]8.8e-5967Show/hide
Query:  PHIQCIFPPFFIPSYHGPMIHMPCYLLSNFSFLYK-------SPST-------HLFFIKSKTMGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVK
        P  +C FPPF       P    P  LL   SF+YK        PS+       H    K KTMGVCASSQHSNA  TNWPFTAKIIHTDGRLQELRHPVK
Subjt:  PHIQCIFPPFFIPSYHGPMIHMPCYLLSNFSFLYK-------SPST-------HLFFIKSKTMGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVK

Query:  ASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLATVANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPA
        ASHILNQNPNCFLCSSESM I S+VPQ SSDRELELGEIYFLIPL K+HLPISLT LC+LA  ANVALA+SKKA+ SL+    AV  E ER GRR EIPA
Subjt:  ASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLATVANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPA

Query:  KWV
        KWV
Subjt:  KWV

XP_022148561.1 uncharacterized protein LOC111017195 [Momordica charantia]8.8e-5180.92Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHS+A  TNWPFTAKIIHTDG LQELRHPVKA HIL+QNP+CFLCSSESM IDS+VPQ SSDRELELGEIYFLIPLAK+HLP+SLT LC LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALATSKKAY SL+AAP AV F     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

XP_022944054.1 uncharacterized protein LOC111448604 [Cucurbita moschata]9.8e-5079.39Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHS+   TNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESM I+S+VPQ SSDRELELGEIYFLIPLAK+ LPISLT LC LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALA+SKKAY S++AAP AV +     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

XP_031736714.1 uncharacterized protein LOC101205353 [Cucumis sativus]4.5e-5582.27Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHSNA  TNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESM I S+VPQ SSDRELELGEIYFLIPL K+HLPISLT LC+LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPAKWV
         ANVALA+SKKA+ SL+    AV  E ER GRR EIPAKWV
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPAKWV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX5 Uncharacterized protein3.1e-5780Show/hide
Query:  HLFFIKSKTMGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPIS
        H    K KTMGVCASSQHSNA  TNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESM I S+VPQ SSDRELELGEIYFLIPL K+HLPIS
Subjt:  HLFFIKSKTMGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPIS

Query:  LTKLCTLATVANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPAKWV
        LT LC+LA  ANVALA+SKKA+ SL+    AV  E ER GRR EIPAKWV
Subjt:  LTKLCTLATVANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPAKWV

A0A5D3CPA0 Uncharacterized protein1.6e-5383.97Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHSNA  TNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESM IDS+VPQ SSDRELELGEIYFLIPL KAHLPISLT LC+LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALA+SKKA+ SL+AAPTAV +     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

A0A6J1D5R9 uncharacterized protein LOC1110171954.3e-5180.92Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHS+A  TNWPFTAKIIHTDG LQELRHPVKA HIL+QNP+CFLCSSESM IDS+VPQ SSDRELELGEIYFLIPLAK+HLP+SLT LC LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALATSKKAY SL+AAP AV F     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

A0A6J1FVY0 uncharacterized protein LOC1114486044.7e-5079.39Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHS+   TNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESM I+S+VPQ SSDRELELGEIYFLIPLAK+ LPISLT LC LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVALA+SKKAY S++AAP AV +     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

A0A6J1JDD5 uncharacterized protein LOC1114840031.3e-4777.1Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MGVCASSQHS+   T W FTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESM I+S+VPQ SSDRELELGEIYFLIPLAK+ LPISLT LC LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATSKKAYSSLEAAPTAVMFEFERRG
         ANVAL +SKKAY S++AAP AV +     G
Subjt:  VANVALATSKKAYSSLEAAPTAVMFEFERRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein4.7e-1032.52Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPI
        MG+C S   +   + +   TAKI+  +G L+E   PV AS +L          + + + FLC+S+S+  D  +P   SD  L+  +IYF++P++K    +
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPI

Query:  SLTKLCTLATVANVAL--ATSKK
        S + +  LA  A+VA+  A  KK
Subjt:  SLTKLCTLATVANVAL--ATSKK

AT2G23690.1 unknown protein2.3e-1738.53Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MG+C+S + +         TAK+I  DGR+ E   PVK  ++L +NP CF+C+S+ M+ D+VV   S+D E +LG++YF +PL+  H  +   ++  LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATS
         A+ AL  S
Subjt:  VANVALATS

AT3G50800.1 unknown protein2.1e-1338.53Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MG CAS +           TAK+I  DG LQE   PVK   IL +NP  F+C+S+ M+ D  V       +L  GE+YF++PL   + P+   ++  LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATS
         A+ ALA S
Subjt:  VANVALATS

AT4G37240.1 unknown protein8.9e-1739.62Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MG+C+SS+ +         TAK+I  DGR+ E  +PVK  ++L + P CF+C+S+ M+ D  V   S+D EL+LG+IYF +PL     P+   ++  LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVAL
         A+ AL
Subjt:  VANVAL

AT5G66580.1 unknown protein4.6e-1336.7Show/hide
Query:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT
        MG CAS +   +       +AK+I  DG LQE   PVK   IL +NP  F+C+S+ M+ D  V   + + EL  G++YF++PL   + P+   ++  LA 
Subjt:  MGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLAT

Query:  VANVALATS
         A+ AL  S
Subjt:  VANVALATS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATACATATGCATACATATACCTCATATTCAATGCATTTTTCCGCCGTTTTTTATACCATCTTATCATGGCCCCATGATTCACATGCCCTGCTATCTTCTCTCCAA
CTTTTCCTTTCTATATAAATCACCAAGCACCCATCTGTTCTTCATCAAATCAAAAACCATGGGGGTGTGCGCCTCATCTCAGCACTCAAATGCTCGCTTCACGAACTGGC
CCTTCACTGCCAAAATTATTCATACAGATGGTAGGCTTCAAGAACTGAGGCACCCAGTAAAAGCCAGCCACATTCTAAATCAAAACCCCAATTGTTTTCTGTGCAGCTCA
GAATCTATGAACATCGATTCGGTCGTTCCCCAATTTTCGAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTTCTAATCCCGCTCGCGAAAGCCCATCTCCCGATTTC
TCTGACGAAGCTGTGCACATTGGCCACTGTTGCGAATGTCGCCCTCGCTACCTCCAAGAAGGCGTATTCGTCTCTGGAAGCGGCGCCGACCGCCGTCATGTTCGAATTCG
AACGCCGGGGTCGCCGGAATGAGATTCCGGCGAAGTGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTGTTAATTGGATTTGGTCTTTTATAACATGCCTACACAGTGTGGCTTTGAGATTTTTCCTGGAAGATGATGAATGAAGCACGCCATTTTTAGTCCAGACCTTGTAAGAG
TTGCTCCAAAATCTGCCCTACCTGATCAACACAGACTATGAAAATTAATGAAGAGAGATGACAGCAATACCTCATGAGACAACAAAATCTGGATAGTATAGTTCAGTACA
GCAAGAAACTGTTATGACACAGCACCAGGCCCTTTCCTTCTCTGTTACAGTCCAAGAAGTAATTTGGTTAGTACTATTTTCAGTCTCCTTTCACCTTTCTTATTAAACCT
ATTACCTAACATGACACAGAATAGTCACCCTTCTATGGCACCAAGATTGATCCGTATCCTTCAAATCCATGAATTGAACCATGAACATTGTCCTTTTTTTGGATAAGAGA
CAATATCATTCAAGAATCTACGAAAAACAGCCTCGGGGTCGAGTAGAGATCGCCCCCATCTGGAATTTAAAACAAAAAAGGCTTATCAATCCAGATTAATCTTTTTGGTT
AAGAAACAATTTCATTGATATATGAAATTACAAAGAAGGGAAAAGATCCTGAGGGAGAAGTTAGGAGAGACCTCTAAAATTGGAAGGTAATTATCAAAATTATAATGATG
GAAAAGTGGGAATTTTTTACACCACCTGATAACCAATAATGTGTTACACAGTAAAAAAACGACAATTTGTAGCTTCCTTTTCTTGGAAGATTCTTCAGTTCTACTTTTGC
CAATCCAAATTAATCAAGGAAACACTACGGTTACGAAATAATTCTATTGAACTATAGGCCATGAGCAGTGGATACGCACAAGAAAAAGGGAAAGCATAAGCATTCTAATT
TTTCTTTTTTTTGAACCAACAACATTTGGAGAAGGGAAATTCACACCTATAACCTCATGGTTACTAGCTTACACAAAATGCTGCTAGTGGTCTGCTCTTGTTGGCCGGCT
TCTCATCTCTACACTACACTAATAGAAACAATAGTACATATAAATAAGCATTGTTAAAATCTTAATATTGAGAATATTGAGAACTATCAAGGAGTGACCTATTGGTTAAG
AAGGTCTTAGGGCACTAAGAGCCAAGGTGATGTGTTCAATCCATGGCAGTCACCTGCCTAATAATTAACTTCGTACAAATTTCCTTCACATCCAATGTCCCATGATAATA
GGCGAGCTGCACGCAAGGCCCGGACAGTCACGAATATCAAAACAATCAGATCCAAAATGTTAATCATGTTGATCAATCACATAAGTGTTTCACTACTTCATAGAATGGTG
ATAGAAGAAAAGTTACCACTTGCTGTCATTGTCAAAGAGTGAGGGACACATTGAACAGTCGGTTGGCCGAGAATGGTCCGTGTGGCCCAGCCATCTGCACAGTTATGGTA
CCTACTTGTAGCACCAAGGAAACTTCAAAAACCAAAAAATGATATACATATGCATACATATACCTCATATTCAATGCATTTTTCCGCCGTTTTTTATACCATCTTATCAT
GGCCCCATGATTCACATGCCCTGCTATCTTCTCTCCAACTTTTCCTTTCTATATAAATCACCAAGCACCCATCTGTTCTTCATCAAATCAAAAACCATGGGGGTGTGCGC
CTCATCTCAGCACTCAAATGCTCGCTTCACGAACTGGCCCTTCACTGCCAAAATTATTCATACAGATGGTAGGCTTCAAGAACTGAGGCACCCAGTAAAAGCCAGCCACA
TTCTAAATCAAAACCCCAATTGTTTTCTGTGCAGCTCAGAATCTATGAACATCGATTCGGTCGTTCCCCAATTTTCGAGCGACAGAGAGCTCGAATTGGGGGAAATTTAT
TTTCTAATCCCGCTCGCGAAAGCCCATCTCCCGATTTCTCTGACGAAGCTGTGCACATTGGCCACTGTTGCGAATGTCGCCCTCGCTACCTCCAAGAAGGCGTATTCGTC
TCTGGAAGCGGCGCCGACCGCCGTCATGTTCGAATTCGAACGCCGGGGTCGCCGGAATGAGATTCCGGCGAAGTGGGTTTGATGGGGTTTGGAAGAAGAACGGAATTTGA
TGAGATTTCGACATTGTATTTCGGAAAGAATCATTGATGGCCAAAGCTGTGAAGTTCAGAGAGATGAGAATGCCTTGGAGGAGAAACAATGGCGCATGCTGTATTTCTTT
CTCTCTCTCTTTTTT
Protein sequenceShow/hide protein sequence
MIYICIHIPHIQCIFPPFFIPSYHGPMIHMPCYLLSNFSFLYKSPSTHLFFIKSKTMGVCASSQHSNARFTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSS
ESMNIDSVVPQFSSDRELELGEIYFLIPLAKAHLPISLTKLCTLATVANVALATSKKAYSSLEAAPTAVMFEFERRGRRNEIPAKWV