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Sed0018526 (gene) of Chayote v1 genome

Gene IDSed0018526
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG08:35484772..35485080
RNA-Seq ExpressionSed0018526
SyntenySed0018526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1212726.1 hypothetical protein CJ030_MR5G009768 [Morella rubra]6.3e-0845.16Show/hide
Query:  AWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQ-TPLR---SGNYLSFLKRKLQKPCVQDV-----------EFSDCKLNKNGNLQN
        AW+SSGSIGPF AVISVLT+L++LSC LGR+C+R   D  TPL          + KRK ++    DV           E +DCK+ K+G++Q+
Subjt:  AWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQ-TPLR---SGNYLSFLKRKLQKPCVQDV-----------EFSDCKLNKNGNLQN

OVA07645.1 hypothetical protein BVC80_7393g5 [Macleaya cordata]9.6e-0948.19Show/hide
Query:  PPLLPD--VHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICS-RGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEF
        P + P   V  + A GGAWRSSGSIGPF AV++VLT+L+VLSC L RICS R       +R G+ + +L+RK  + C+   +F
Subjt:  PPLLPD--VHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICS-RGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEF

XP_006390472.1 uncharacterized protein LOC18008564 [Eutrema salsugineum]2.4e-0751.28Show/hide
Query:  SSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYE------DQTPL---RSGNYLSFLKRKLQKPCVQDVE----FSDC
        SSGSIGPF AVISVL +L+VLSCFLGRIC+R  +      +  PL   +SG  L +L+RK ++    DVE     SDC
Subjt:  SSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYE------DQTPL---RSGNYLSFLKRKLQKPCVQDVE----FSDC

XP_022137289.1 uncharacterized protein LOC111008787 [Momordica charantia]1.7e-2158.97Show/hide
Query:  MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFS-------------
        MATAS+ PLLPD   +PAGGG  +SSGSIGPF AVISVLTLLS+LSCFLGRICSRG E +TPL+S N L  LK +LQ+ CV+DVE               
Subjt:  MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFS-------------

Query:  --DCKLNKNGNLQNSSS
          D K  K+ +LQN SS
Subjt:  --DCKLNKNGNLQNSSS

XP_030940931.1 uncharacterized protein LOC115965771 [Quercus lobata]1.8e-0743.88Show/hide
Query:  ASTPPLLPDVHHSPAG-------------GGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQDVE
        A+T P LP +   PAG               AW SSGSIGPF AV+SVLT+L++LSC LGR+C++  E  TPL S      L ++KRK ++    DV+
Subjt:  ASTPPLLPDVHHSPAG-------------GGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQDVE

TrEMBL top hitse value%identityAlignment
A0A200QB10 Uncharacterized protein4.7e-0948.19Show/hide
Query:  PPLLPD--VHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICS-RGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEF
        P + P   V  + A GGAWRSSGSIGPF AV++VLT+L+VLSC L RICS R       +R G+ + +L+RK  + C+   +F
Subjt:  PPLLPD--VHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICS-RGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEF

A0A2N9HK44 Uncharacterized protein1.8e-0843.22Show/hide
Query:  ASTPPLLPDVHHSPAGG-----------GAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQ--DVE--
        A+T   LP     PAGG             W+SSGSIGPF AV+SVL LLS+LSC LG+IC+R  E  +PL S      L ++KRK ++ C+   DVE  
Subjt:  ASTPPLLPDVHHSPAGG-----------GAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQ--DVE--

Query:  ---FSDCKLNKN-GNLQN
            + CK  KN GN+++
Subjt:  ---FSDCKLNKN-GNLQN

A0A6A1VLI4 Uncharacterized protein3.0e-0845.16Show/hide
Query:  AWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQ-TPLR---SGNYLSFLKRKLQKPCVQDV-----------EFSDCKLNKNGNLQN
        AW+SSGSIGPF AVISVLT+L++LSC LGR+C+R   D  TPL          + KRK ++    DV           E +DCK+ K+G++Q+
Subjt:  AWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQ-TPLR---SGNYLSFLKRKLQKPCVQDV-----------EFSDCKLNKNGNLQN

A0A6J1C6U1 uncharacterized protein LOC1110087878.2e-2258.97Show/hide
Query:  MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFS-------------
        MATAS+ PLLPD   +PAGGG  +SSGSIGPF AVISVLTLLS+LSCFLGRICSRG E +TPL+S N L  LK +LQ+ CV+DVE               
Subjt:  MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFS-------------

Query:  --DCKLNKNGNLQNSSS
          D K  K+ +LQN SS
Subjt:  --DCKLNKNGNLQNSSS

A0A7N2MQY5 Uncharacterized protein8.8e-0843.88Show/hide
Query:  ASTPPLLPDVHHSPAG-------------GGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQDVE
        A+T P LP +   PAG               AW SSGSIGPF AV+SVLT+L++LSC LGR+C++  E  TPL S      L ++KRK ++    DV+
Subjt:  ASTPPLLPDVHHSPAG-------------GGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRS---GNYLSFLKRKLQKPCVQDVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74055.1 unknown protein9.3e-1050Show/hide
Query:  SSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYE------DQTPL---RSGNYLSFLKRKLQKPCVQDVE
        SS SIGPF AVISVL +L+VLSCFLGR C+R  +      +  PL   +SG  L +L+RK ++    DVE
Subjt:  SSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYE------DQTPL---RSGNYLSFLKRKLQKPCVQDVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCATCCACGCCGCCGTTGTTGCCGGACGTTCATCATTCTCCGGCGGGCGGCGGAGCCTGGAGGTCTTCCGGTTCGATCGGGCCGTTCTTGGCGGTGATCTC
TGTTTTAACTCTGCTTTCGGTTCTGTCTTGCTTTTTGGGAAGAATTTGCAGTCGCGGATATGAAGATCAAACGCCATTACGGAGTGGAAATTATTTGAGTTTTTTGAAGA
GGAAGTTGCAGAAGCCATGTGTTCAAGACGTTGAGTTCAGTGATTGCAAGCTTAACAAAAATGGCAACCTTCAAAACTCTTCCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCATCCACGCCGCCGTTGTTGCCGGACGTTCATCATTCTCCGGCGGGCGGCGGAGCCTGGAGGTCTTCCGGTTCGATCGGGCCGTTCTTGGCGGTGATCTC
TGTTTTAACTCTGCTTTCGGTTCTGTCTTGCTTTTTGGGAAGAATTTGCAGTCGCGGATATGAAGATCAAACGCCATTACGGAGTGGAAATTATTTGAGTTTTTTGAAGA
GGAAGTTGCAGAAGCCATGTGTTCAAGACGTTGAGTTCAGTGATTGCAAGCTTAACAAAAATGGCAACCTTCAAAACTCTTCCTCTTAG
Protein sequenceShow/hide protein sequence
MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFSDCKLNKNGNLQNSSS