; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018594 (gene) of Chayote v1 genome

Gene IDSed0018594
OrganismSechium edule (Chayote v1)
DescriptionSerine-rich protein-like protein
Genome locationLG03:10343558..10343953
RNA-Seq ExpressionSed0018594
SyntenySed0018594
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598561.1 Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4377.69Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS +RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    +SSS LNMRRSAMTNSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

XP_022962284.1 uncharacterized protein LOC111462780 [Cucurbita moschata]3.1e-4478.46Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS++RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    YSSS LNMRRSAMTNSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

XP_022996630.1 uncharacterized protein LOC111491813 [Cucurbita maxima]4.5e-4377.69Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS +RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    YSSS LNMRRSAM NSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

XP_023547160.1 uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]5.3e-4478.46Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS +RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    YSSS LNMRRSAMTNSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

XP_038885670.1 uncharacterized protein LOC120075978 [Benincasa hispida]1.0e-4277.86Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQA-SSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALT
        +S SVRFSI HRSGS +RSI+ S+RN PV   KK C CSPTTHPGS+RCSLHKNS SGGH QA SSAY+SS LNMRRSAMTNSLVRIGGVEGD VKRALT
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQA-SSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALT

Query:  ALIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        ALIRPSSHQ RRRANFRP+ SRLS MS   +
Subjt:  ALIRPSSHQQRRRANFRPRPSRLSAMSNVRD

TrEMBL top hitse value%identityAlignment
A0A0A0LME8 Uncharacterized protein1.5e-3976.56Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL
        +SHSVRFSI HR+GS     + SNRN PVS  KK C CSPTTHPGS+RCSLHK S SG   H+ +SSAYSSS LNMRRSAMTNSLVRIGGVEG+ VKRAL
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL

Query:  TALIRPSSHQQRRRANFRPRPSRLSAMS
        TALIRPSSHQ RRRANFRP+PSRLS MS
Subjt:  TALIRPSSHQQRRRANFRPRPSRLSAMS

A0A1S3BC71 nuclear transcription factor Y subunit gamma-like1.1e-3977.34Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL
        +S SVRFSI HRSGS       SNRN PVS  KK CMCSPTTHPGS+RCSLHK S SG   H+ +SSAYSS+ LNMRRSAMTNSLVRIGGVEGD VKRAL
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL

Query:  TALIRPSSHQQRRRANFRPRPSRLSAMS
        TALIRPSSHQ RRRANFRP+PSRLS MS
Subjt:  TALIRPSSHQQRRRANFRPRPSRLSAMS

A0A5A7VCJ2 Nuclear transcription factor Y subunit gamma-like1.1e-3977.34Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL
        +S SVRFSI HRSGS       SNRN PVS  KK CMCSPTTHPGS+RCSLHK S SG   H+ +SSAYSS+ LNMRRSAMTNSLVRIGGVEGD VKRAL
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSG--GHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRAL

Query:  TALIRPSSHQQRRRANFRPRPSRLSAMS
        TALIRPSSHQ RRRANFRP+PSRLS MS
Subjt:  TALIRPSSHQQRRRANFRPRPSRLSAMS

A0A6J1HGM5 uncharacterized protein LOC1114627801.5e-4478.46Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS++RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    YSSS LNMRRSAMTNSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

A0A6J1K7C8 uncharacterized protein LOC1114918132.2e-4377.69Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA
        +S SVRFSIDHRSGS +RSI+ SNRN PVS  KK C CSPTTHPGS+RCSLH+NS +GGH Q    YSSS LNMRRSAM NSLVRIGGVEGD VKRALTA
Subjt:  MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTA

Query:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        LIRPSSHQ RRRANFRPRPSRLS +S   D
Subjt:  LIRPSSHQQRRRANFRPRPSRLSAMSNVRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein9.8e-0441.3Show/hide
Query:  HRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSS
        H   +S   + +   +   S TK  C+CSPTTHPGS+RC +H++ S
Subjt:  HRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSS

AT5G11090.1 serine-rich protein-related7.7e-3359.7Show/hide
Query:  MSHSVRFSIDHRSGS-SNRSISASNRNFPVSPTK--KQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRA
        MS S R+S+D RS S +N+SIS S    P    K  ++CMCSPTTHPGS+RCSLHKN ++  H Q +++Y+++ LNMRRSAMTNSLVRIGGVEG+ V+RA
Subjt:  MSHSVRFSIDHRSGS-SNRSISASNRNFPVSPTK--KQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRA

Query:  LTALIRPSSHQQRRRANFRPRPSRLSAMSNVRDH
        LT LIRPSSH  +RRA ++PRPSRLS M+   ++
Subjt:  LTALIRPSSHQQRRRANFRPRPSRLSAMSNVRDH

AT5G20370.1 serine-rich protein-related5.2e-1342.45Show/hide
Query:  TKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSS---------------RLNMRRSAMTNSLVRIGGVEGDLVKRALTA-LIRPSSHQQRRRANF
        TK++C+CSPTTHPGS+RCS H+      H ++ +  SS+                LN+R+ A+ NSL +IG VE +  +R+L A L +PSS    RR  F
Subjt:  TKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSS---------------RLNMRRSAMTNSLVRIGGVEGDLVKRALTA-LIRPSSHQQRRRANF

Query:  RPRPSR
        RPR SR
Subjt:  RPRPSR

AT5G25280.1 serine-rich protein-related4.1e-3458.21Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISAS----NRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKR
        M+ S R+SID+RS S NRSI+ S    + +  +  ++++CMCSPTTHPGS+RCSLHKN ++  H Q +++Y+++ LNMRRSAMTNSLVRIGGVEG+ V+R
Subjt:  MSHSVRFSIDHRSGSSNRSISAS----NRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKR

Query:  ALTALIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        ALT LIRPSSHQ +RR+ + PR SRL++MS   D
Subjt:  ALTALIRPSSHQQRRRANFRPRPSRLSAMSNVRD

AT5G25280.2 serine-rich protein-related4.1e-3458.21Show/hide
Query:  MSHSVRFSIDHRSGSSNRSISAS----NRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKR
        M+ S R+SID+RS S NRSI+ S    + +  +  ++++CMCSPTTHPGS+RCSLHKN ++  H Q +++Y+++ LNMRRSAMTNSLVRIGGVEG+ V+R
Subjt:  MSHSVRFSIDHRSGSSNRSISAS----NRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKR

Query:  ALTALIRPSSHQQRRRANFRPRPSRLSAMSNVRD
        ALT LIRPSSHQ +RR+ + PR SRL++MS   D
Subjt:  ALTALIRPSSHQQRRRANFRPRPSRLSAMSNVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCACTCTGTTCGGTTCTCAATTGACCACCGGTCCGGTTCGTCAAACCGGTCAATCTCAGCTTCGAACCGGAACTTCCCGGTTTCCCCAACGAAAAAACAGTGCAT
GTGTTCGCCGACCACTCACCCGGGCTCTTACCGGTGCAGTCTGCATAAAAATTCCAGCAGCGGCGGCCACCGTCAGGCGTCGTCAGCGTATAGTTCAAGCCGGTTGAATA
TGCGGCGGTCGGCAATGACGAACTCGCTTGTGAGGATCGGTGGCGTTGAAGGAGACTTGGTCAAACGAGCGTTGACTGCTTTGATTCGGCCGTCTTCACACCAGCAGCGG
CGGAGAGCCAATTTCCGGCCCCGGCCCAGCCGCCTTTCCGCCATGTCCAACGTCCGGGATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCACTCTGTTCGGTTCTCAATTGACCACCGGTCCGGTTCGTCAAACCGGTCAATCTCAGCTTCGAACCGGAACTTCCCGGTTTCCCCAACGAAAAAACAGTGCAT
GTGTTCGCCGACCACTCACCCGGGCTCTTACCGGTGCAGTCTGCATAAAAATTCCAGCAGCGGCGGCCACCGTCAGGCGTCGTCAGCGTATAGTTCAAGCCGGTTGAATA
TGCGGCGGTCGGCAATGACGAACTCGCTTGTGAGGATCGGTGGCGTTGAAGGAGACTTGGTCAAACGAGCGTTGACTGCTTTGATTCGGCCGTCTTCACACCAGCAGCGG
CGGAGAGCCAATTTCCGGCCCCGGCCCAGCCGCCTTTCCGCCATGTCCAACGTCCGGGATCACTAA
Protein sequenceShow/hide protein sequence
MSHSVRFSIDHRSGSSNRSISASNRNFPVSPTKKQCMCSPTTHPGSYRCSLHKNSSSGGHRQASSAYSSSRLNMRRSAMTNSLVRIGGVEGDLVKRALTALIRPSSHQQR
RRANFRPRPSRLSAMSNVRDH