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Sed0018607 (gene) of Chayote v1 genome

Gene IDSed0018607
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:5223008..5223697
RNA-Seq ExpressionSed0018607
SyntenySed0018607
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575656.1 hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1458.33Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSL+IRRI+A  SD PS   +    P + R      GEC T+FDEG S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

XP_022147203.1 uncharacterized protein LOC111016209 [Momordica charantia]4.3e-1965.56Show/hide
Query:  LEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        LEG++ TAA+F LVQ+LVYLI+SKSSDVFS N  RSLSFR VRSLSIRRI+A  SD+PS   E SP P++  SPF IGGEC  +F +G S
Subjt:  LEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

XP_022954080.1 uncharacterized protein LOC111456452 [Cucurbita moschata]3.8e-1559.38Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSLSIRRI+A  SD PS   +    P + R      GEC T+FDEG S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

XP_022991948.1 uncharacterized protein LOC111488440 [Cucurbita maxima]5.1e-1265.75Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSLSIRRI+A  SD PS A +   S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS

XP_023548863.1 uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]8.5e-1558.33Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSL+IRRI+A  SD PS   +    P + R      GEC T+FDEG S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

TrEMBL top hitse value%identityAlignment
A0A061FSC6 Uncharacterized protein5.2e-1057.5Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSP
        ME+   L   L    MF++VQ LVYLI+SKSSD+FS N  RSLSF+R RSLSIRRI+A  SDLP     + PS S  RSP
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSP

A0A6J0PQA3 uncharacterized protein LOC1095065096.1e-1161.84Show/hide
Query:  SQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSP
        SQ   VL   AMFVLVQ LVYLI+SKSS++FST   RSLSFR VRS+SIRR++A  SDLP       PSPS   SP
Subjt:  SQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSP

A0A6J1D0M4 uncharacterized protein LOC1110162092.1e-1965.56Show/hide
Query:  LEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        LEG++ TAA+F LVQ+LVYLI+SKSSDVFS N  RSLSFR VRSLSIRRI+A  SD+PS   E SP P++  SPF IGGEC  +F +G S
Subjt:  LEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

A0A6J1GRF7 uncharacterized protein LOC1114564521.8e-1559.38Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSLSIRRI+A  SD PS   +    P + R      GEC T+FDEG S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS

A0A6J1JXQ0 uncharacterized protein LOC1114884402.5e-1265.75Show/hide
Query:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS
        MEI   LEG+  TAA+F+LVQ+LVYLI+SKSS VFS N  RSLSFR+VRSLSIRRI+A  SD PS A +   S
Subjt:  MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein7.9e-1157.35Show/hide
Query:  EGVLPTAAMFVLVQLLVYLIISKSSDVFSTN--VNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS
        EG+L   ++F L+Q LVYLI+SKSS VFST+  + R+ SFR  RS+SIRRI+AV  D+P A  E SPS
Subjt:  EGVLPTAAMFVLVQLLVYLIISKSSDVFSTN--VNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPS

AT2G31945.1 unknown protein1.1e-0748.05Show/hide
Query:  VLPTAAMFVLVQLLVYLIISKSSDVF--STNVNRSLSFRRVRSLSIRRIVAVFSDLP-----SAAAEASPSPSQDRS
        +L   A+F LVQ LVYLI+ KSS VF  S ++ R+ SFR +RS+SIRRI+A   D+P     S ++  S S SQD +
Subjt:  VLPTAAMFVLVQLLVYLIISKSSDVF--STNVNRSLSFRRVRSLSIRRIVAVFSDLP-----SAAAEASPSPSQDRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTACCAGCCAATTGGAAGGAGTTCTACCGACGGCGGCCATGTTCGTCCTCGTGCAGCTTCTCGTTTACTTAATTATCTCCAAATCTTCCGACGTCTTCTCCAC
AAACGTCAACCGGTCTCTCTCTTTCAGACGCGTTCGATCTCTTAGTATTCGTCGGATTGTCGCTGTTTTCTCCGATTTGCCCTCCGCCGCCGCCGAGGCTTCTCCTTCGC
CAAGTCAGGACCGGTCGCCGTTTCTCATCGGCGGCGAATGCGAAACTGTGTTCGATGAAGGCTGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
GCGCCAAGTCAAAGCAAAGCCTCAATTTCTGAATTAAACGAAACCCCCACGCTTTTCCAATTCCCCTTTCCCCAAATTATTTATAAAACCCTAATTCTTCCATTCCCAAT
TGCAAAATAGATCCAAATCATATTCCGTTGATTTCTGATACTGAAACTCTCTTAATGGAGATTACCAGCCAATTGGAAGGAGTTCTACCGACGGCGGCCATGTTCGTCCT
CGTGCAGCTTCTCGTTTACTTAATTATCTCCAAATCTTCCGACGTCTTCTCCACAAACGTCAACCGGTCTCTCTCTTTCAGACGCGTTCGATCTCTTAGTATTCGTCGGA
TTGTCGCTGTTTTCTCCGATTTGCCCTCCGCCGCCGCCGAGGCTTCTCCTTCGCCAAGTCAGGACCGGTCGCCGTTTCTCATCGGCGGCGAATGCGAAACTGTGTTCGAT
GAAGGCTGCTCTTAAATTTAGCTGCACCTTGTGCTATAGTGTGCTCTTTTGCTCTGTCATTTCTATTCCACTTTTTAATTGTTTTTTTGTGAATGATTATGCAAGTTTGT
AAAATTATTAAATTATGTTTAATCATTGAATGAATTCACAATTCGTTAATTACTTAAAACTTTTTATTCTTTTCAATGTATTATGTCACAAGAATCTTGCTACTTTTGGC
CACACATTATTGCCTTTAATTGACTATAAT
Protein sequenceShow/hide protein sequence
MEITSQLEGVLPTAAMFVLVQLLVYLIISKSSDVFSTNVNRSLSFRRVRSLSIRRIVAVFSDLPSAAAEASPSPSQDRSPFLIGGECETVFDEGCS