; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018620 (gene) of Chayote v1 genome

Gene IDSed0018620
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand
Genome locationLG01:21216825..21217354
RNA-Seq ExpressionSed0018620
SyntenySed0018620
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064377.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]1.2e-3482.29Show/hide
Query:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        ++FVF S GV DYKR PVPFSRDQLR+IFLKHD +GDGRLSRLELKSAFDSLGSNWS FRARQ LKAAD+D DG+VTLDELD LLDYAVR EYAI+
Subjt:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

KAF3961271.1 hypothetical protein CMV_014096 [Castanea mollissima]1.2e-1651.81Show/hide
Query:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI
        +KR  VPF+  QL NIF  HD +GDG+LSR ELK+AF  LGS W ++R  Q L+ AD++ DG++T DEL +L++YA+ C Y +
Subjt:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI

KAG6591371.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3784.38Show/hide
Query:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        MSF+FR+ GV DYKR PVPFSR+QLR+IFLKHD +GDGRLSRLELKSAFDSLGSNWS FRARQ LKAADSD DG+VTLDELDRLLDY+VRCEYAI+
Subjt:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

KAG6608480.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3480.43Show/hide
Query:  FRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        FRS G+CDYKR PVPF+++QLR IFL+HD +GDGRLSRLELK+AF+SLGSNWS FRARQCLKAADS+ DG+VTLDELD LLDYAVRCEYAI+
Subjt:  FRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

KGN55186.1 hypothetical protein Csa_012423 [Cucumis sativus]1.0e-3684.38Show/hide
Query:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        +SFVF S GV DYKR PVPFSRDQLR+IFLKHD +GDGRLSRLELKSAF+SLGSNWS FRARQ LKAAD+D DG+VTLDELDRLLDYAVRCEYAI+
Subjt:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein4.9e-3784.38Show/hide
Query:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        +SFVF S GV DYKR PVPFSRDQLR+IFLKHD +GDGRLSRLELKSAF+SLGSNWS FRARQ LKAAD+D DG+VTLDELDRLLDYAVRCEYAI+
Subjt:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

A0A2N9FYQ0 Uncharacterized protein4.8e-1647.67Show/hide
Query:  VCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI
        V  +KR  +PF+ +QL NIF  HD +GDG+LS+ E+K AF  LGS W ++RA Q +  AD+D DG++  +EL +L+ YA+ C Y I
Subjt:  VCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI

A0A5A7VBH2 Calcium-binding EF-hand6.0e-3582.29Show/hide
Query:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL
        ++FVF S GV DYKR PVPFSRDQLR+IFLKHD +GDGRLSRLELKSAFDSLGSNWS FRARQ LKAAD+D DG+VTLDELD LLDYAVR EYAI+
Subjt:  MSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAIL

A0A5N6RQV2 Uncharacterized protein2.1e-1655.42Show/hide
Query:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI
        +K   V F+RDQL NIF  HD +GDG+LSR E+K+AF  LGS W S+RA   L  ADSD DG+V  +EL +L+DYA++C Y I
Subjt:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI

A0A7N2KRS3 Uncharacterized protein1.3e-1651.81Show/hide
Query:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI
        +KR  VPF+  QL NIF  HD +GDG+LSR ELK+AF  LGS W ++R  Q L+ AD++ DG++T DEL +L++YA+ C Y +
Subjt:  YKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLLDYAVRCEYAI

SwissProt top hitse value%identityAlignment
A0T2M3 Polcalcin Cup a 44.8e-0538.6Show/hide
Query:  QLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE
        +L  +F K D NGDG++S  EL     S+GS       +  ++ AD+D DG+V+L E
Subjt:  QLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE

O64943 Polcalcin Jun o 22.1e-0540.35Show/hide
Query:  QLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE
        +L  +F K D NGDG++S  EL     SLGS+      +  ++ AD+D DG+V+L E
Subjt:  QLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE

Q6L4D4 Probable calcium-binding protein CML155.1e-0740.32Show/hide
Query:  PFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE
        P + D+   +F K D NGDGR+SR EL + F S+G   +     + ++ ADSD DG+++L E
Subjt:  PFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE

Q8RZB5 Probable calcium-binding protein CML109.3e-0941.18Show/hide
Query:  PVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL
        P P   +++  +F K D NGDGR+SR EL + F+SLG   +     + +  AD+D DGF++LDE   L
Subjt:  PVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL

Q9LE22 Probable calcium-binding protein CML271.5e-0635.48Show/hide
Query:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL
        ++L+ +F + D NGDG++S LEL   F ++G++++     + L+  D+D DG++ LDE   L
Subjt:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.0e-0735.48Show/hide
Query:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL
        ++L+ +F + D NGDG++S LEL   F ++G++++     + L+  D+D DG++ LDE   L
Subjt:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL

AT1G18210.2 Calcium-binding EF-hand family protein1.0e-0735.48Show/hide
Query:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL
        ++L+ +F + D NGDG++S LEL   F ++G++++     + L+  D+D DG++ LDE   L
Subjt:  DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRL

AT1G73630.1 EF hand calcium-binding protein family4.4e-0635.48Show/hide
Query:  PFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE
        P +  +L+ +F K D NGDG++S  EL + F S+G++++     + L   D D DGF+  +E
Subjt:  PFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDE

AT2G15680.1 Calcium-binding EF-hand family protein2.2e-0528.92Show/hide
Query:  GVCDYKRYPVPFSR------DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLL
        G  D++ +   + R        +RN F   D NGDG++S  E+ S    LG   S     + ++A D+D DG V ++E  +++
Subjt:  GVCDYKRYPVPFSR------DQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLL

AT3G50770.1 calmodulin-like 417.5e-0633.85Show/hide
Query:  SRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLL
        S+++LR +F   D +GDG++S  EL+  F S+G   S   A++ +   D+DADG +  ++   L+
Subjt:  SRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAATACCCTAACTCCTACGAGGCTGCAACACACCCGAAAACCAAACCGGCGATCGGCAACAAAACCGGCGGCGAGATGAGTTTCGTGTTCCGGAGCGGCGGCGT
GTGCGACTACAAGCGATATCCAGTTCCGTTCTCACGGGATCAGCTTCGTAATATCTTCCTGAAGCACGACTGCAACGGCGACGGCCGCCTCTCTCGGCTCGAACTGAAAT
CCGCGTTCGATTCCTTAGGATCTAACTGGAGCAGTTTCAGAGCTCGCCAGTGCCTCAAAGCTGCTGATTCCGATGCCGATGGCTTCGTCACTCTCGATGAACTCGATCGC
CTCCTCGATTACGCTGTAAGATGCGAGTACGCTATACTTTGA
mRNA sequenceShow/hide mRNA sequence
ACAAATTGATGAATAAATACCCTAACTCCTACGAGGCTGCAACACACCCGAAAACCAAACCGGCGATCGGCAACAAAACCGGCGGCGAGATGAGTTTCGTGTTCCGGAGC
GGCGGCGTGTGCGACTACAAGCGATATCCAGTTCCGTTCTCACGGGATCAGCTTCGTAATATCTTCCTGAAGCACGACTGCAACGGCGACGGCCGCCTCTCTCGGCTCGA
ACTGAAATCCGCGTTCGATTCCTTAGGATCTAACTGGAGCAGTTTCAGAGCTCGCCAGTGCCTCAAAGCTGCTGATTCCGATGCCGATGGCTTCGTCACTCTCGATGAAC
TCGATCGCCTCCTCGATTACGCTGTAAGATGCGAGTACGCTATACTTTGATGCATTTAGAAATACTTACTTCTTTATGAATAAGGTGATGATTAATGTATATGTGGAATA
AATTTGTGGCACCATTTATTCATAAAAGGCCAGTATTTCTTGTTTAACCATATATATATATATATATATATATATATATATATATATATA
Protein sequenceShow/hide protein sequence
MNKYPNSYEAATHPKTKPAIGNKTGGEMSFVFRSGGVCDYKRYPVPFSRDQLRNIFLKHDCNGDGRLSRLELKSAFDSLGSNWSSFRARQCLKAADSDADGFVTLDELDR
LLDYAVRCEYAIL