CuGenDBv2

Gene ID	Sed0018633
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Genome location	LG08:4891336..4891826
RNA-Seq Expression	Sed0018633
Synteny	Sed0018633
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

2.5e-35

75.23

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Query:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC
        MAL NSLFLILPLIFSLS+ HPT      G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

3.5e-37

78.85

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK
        MAL NSLFLILPLIFSLS+ HPT G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKCKCKDK
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_022971966.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita maxima]

4.7e-34

75.96

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHK--SDNNGSVVS--------KDDAYYLLSWKCKCKDK
        MAL NSLFLILPLIFSLS+  PT G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q  K   +NNG VVS        KDDAYYLLSWKCKCKDK
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHK--SDNNGSVVS--------KDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

2.5e-35

75.23

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Query:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC
        MAL NSLFLILPLIFSLS+ HPT      G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

3.5e-37

78.85

Show/hide

Query:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK
        MAL NSLFLILPLIFSLS+ HPT G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKCKCKDK
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZ19 Epidermal patterning factor-like protein

1.7e-37

78.85

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK
        MAL NSLFLILPLIFSLS+ HPT G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKCKCKDK
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

1.2e-35

75.23

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Query:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC
        MAL NSLFLILPLIFSLS+ HPT      G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q HK D  NNG VVS        KDDAYYLLSWKC
Subjt:  MALKNSLFLILPLIFSLSLCHPT-----LGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSD--NNGSVVS--------KDDAYYLLSWKC

Query:  KCKDKYFQP
        KCKDKYFQP
Subjt:  KCKDKYFQP

A0A6J1HB97 Epidermal patterning factor-like protein

1.1e-33

73.79

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHE-NSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSVVS--------KDDAYYLLSWKCKCKDKY
        MALK+SL LILPLIFSLSL HPT G+E +SKQKELVIGSRPP+CFNKCLNC PCVAALVI+Q HK  +N +  S        +DDAYYLLSWKCKCKDKY
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHE-NSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSVVS--------KDDAYYLLSWKCKCKDKY

Query:  FQP
        FQP
Subjt:  FQP

A0A6J1I4N2 Epidermal patterning factor-like protein

2.3e-34

75.96

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHK--SDNNGSVVS--------KDDAYYLLSWKCKCKDK
        MAL NSLFLILPLIFSLS+  PT G+E+SKQKEL IGSRPPKCFNKCLNC PCVAALVI+Q  K   +NNG VVS        KDDAYYLLSWKCKCKDK
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHK--SDNNGSVVS--------KDDAYYLLSWKCKCKDK

Query:  YFQP
        YFQP
Subjt:  YFQP

A0A6J1JFP8 Epidermal patterning factor-like protein

5.6e-33

71.84

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Query:  MALKNSLFLILPLIFSLSLCHPTLGHE-NSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSV--------VSKDDAYYLLSWKCKCKDKY
        MALK+SL LILPLIFSLSL HPT G+E +S+QKELVIGSRPP+CFNKCLNC PCVAALVI+Q HK  +N +           +DDAYYLLSWKCKCKDKY
Subjt:  MALKNSLFLILPLIFSLSLCHPTLGHE-NSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSV--------VSKDDAYYLLSWKCKCKDKY

Query:  FQP
        FQP
Subjt:  FQP

SwissProt top hits

e value

%identity

Alignment

P43212 Polygalacturonase

6.2e-05

33.33

Show/hide

Query:  HENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP
        ++   +  +++GSRPP C NKC  C PC A LVI  +H+             YY   W C    K + P
Subjt:  HENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

4.1e-09

37.65

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Query:  LIFSLSLCHPTLGHENSKQ--KELVIGSRPPKCFNKCLNCMPCVAALV-INQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP
        + FSL   H   G    +Q  KE V+GS PP C  KC NC PC+  L  I   H  D++       + YY + W C+C+D+ F+P
Subjt:  LIFSLSLCHPTLGHENSKQ--KELVIGSRPPKCFNKCLNCMPCVAALV-INQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

8.9e-04

28.1

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Query:  ALKNSLFLILPLIFSL-------SLCHPTLGHENSKQKELV-----IGSRPPKCFNKCLNCMPCVAALV-----------INQ-----LHKSDNNGSVVS
        A+  S  L+LPLI  L       S   P +    S Q  L+     +GS PP C N+C NC PC+A  V           +N      +    +  +V+ 
Subjt:  ALKNSLFLILPLIFSL-------SLCHPTLGHENSKQKELV-----IGSRPPKCFNKCLNCMPCVAALV-----------INQ-----LHKSDNNGSVVS

Query:  KDDAYYLLSWKCKCKDKYFQP
        +   Y  + WKC C   ++ P
Subjt:  KDDAYYLLSWKCKCKDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

2.9e-10

37.65

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Query:  LIFSLSLCHPTLGHENSKQ--KELVIGSRPPKCFNKCLNCMPCVAALV-INQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP
        + FSL   H   G    +Q  KE V+GS PP C  KC NC PC+  L  I   H  D++       + YY + W C+C+D+ F+P
Subjt:  LIFSLSLCHPTLGHENSKQ--KELVIGSRPPKCFNKCLNCMPCVAALV-INQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP

AT5G10310.1 unknown protein

6.4e-05

28.1

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Query:  ALKNSLFLILPLIFSL-------SLCHPTLGHENSKQKELV-----IGSRPPKCFNKCLNCMPCVAALV-----------INQ-----LHKSDNNGSVVS
        A+  S  L+LPLI  L       S   P +    S Q  L+     +GS PP C N+C NC PC+A  V           +N      +    +  +V+ 
Subjt:  ALKNSLFLILPLIFSL-------SLCHPTLGHENSKQKELV-----IGSRPPKCFNKCLNCMPCVAALV-----------INQ-----LHKSDNNGSVVS

Query:  KDDAYYLLSWKCKCKDKYFQP
        +   Y  + WKC C   ++ P
Subjt:  KDDAYYLLSWKCKCKDKYFQP

Sequences

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CDS sequence

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ATGGCTTTAAAAAACTCTCTCTTTCTCATTCTTCCTCTCATATTCTCCCTATCTCTTTGTCACCCCACATTAGGGCATGAAAATTCAAAGCAGAAGGAATTGGTGATTGG
GTCAAGGCCACCAAAGTGCTTCAACAAATGCTTAAATTGTATGCCATGTGTTGCTGCTTTGGTTATTAATCAGCTCCATAAGAGTGATAATAATGGTAGTGTCGTTTCTA
AAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGTATTTTCAACCTTAG

mRNA sequence

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TTTGAAACTCCAAATCCCTTCTCTCAATCTCTCTCTCTCCCACACAAATCACTCAAAATATGGCTTTAAAAAACTCTCTCTTTCTCATTCTTCCTCTCATATTCTCCCTA
TCTCTTTGTCACCCCACATTAGGGCATGAAAATTCAAAGCAGAAGGAATTGGTGATTGGGTCAAGGCCACCAAAGTGCTTCAACAAATGCTTAAATTGTATGCCATGTGT
TGCTGCTTTGGTTATTAATCAGCTCCATAAGAGTGATAATAATGGTAGTGTCGTTTCTAAAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGT
ATTTTCAACCTTAGAAACAAAAACATGTTAATATCTCCCATTCTTCCCTTC

Protein sequence

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MALKNSLFLILPLIFSLSLCHPTLGHENSKQKELVIGSRPPKCFNKCLNCMPCVAALVINQLHKSDNNGSVVSKDDAYYLLSWKCKCKDKYFQP

Sed0018633 (gene) of Chayote v1 genome