; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018671 (gene) of Chayote v1 genome

Gene IDSed0018671
OrganismSechium edule (Chayote v1)
DescriptionAlba domain-containing protein
Genome locationLG08:31142130..31144201
RNA-Seq ExpressionSed0018671
SyntenySed0018671
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586319.1 hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4580.56Show/hide
Query:  TMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        T +I+   +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  TMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVE
        KSEKFDSLM+A   AT   EA AGG      GEEKK   E   E
Subjt:  KSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVE

XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]4.9e-4682.99Show/hide
Query:  ATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        AT+++S  T +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK
        LGKSEKFDSLM+A   ATA PE     A  AAA EEKKAE E+K E+
Subjt:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]7.5e-4781.76Show/hide
Query:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+++S  T +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK
        VLGKSEKFDSLM+A   ATA PE      A AAAGEE+K   E K E+
Subjt:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK

XP_022143158.1 uncharacterized protein At2g34160 [Momordica charantia]2.4e-4582.14Show/hide
Query:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MAT+++S   +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE
        LGKSEKFDSLM+AA             AA  AA EEKKAE
Subjt:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]4.4e-4784.29Show/hide
Query:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MAT+++S   +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE
        LGKSEKFDSLM+AA       E  A GA  AAA EEKKAE
Subjt:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein2.4e-4682.99Show/hide
Query:  ATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        AT+++S  T +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK
        LGKSEKFDSLM+A   ATA PE     A  AAA EEKKAE E+K E+
Subjt:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK

A0A1S3C2U1 uncharacterized protein At2g341603.7e-4781.76Show/hide
Query:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+++S  T +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK
        VLGKSEKFDSLM+A   ATA PE      A AAAGEE+K   E K E+
Subjt:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK

A0A5D3D4G4 Alba DNA/RNA-binding protein3.7e-4781.76Show/hide
Query:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MAT+++S  T +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATMSISEVT-STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK
        VLGKSEKFDSLM+A   ATA PE      A AAAGEE+K   E K E+
Subjt:  VLGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK

A0A6J1CQ10 uncharacterized protein At2g341601.2e-4582.14Show/hide
Query:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MAT+++S   +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE
        LGKSEKFDSLM+AA             AA  AA EEKKAE
Subjt:  LGKSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAE

A0A6J1HLL6 uncharacterized protein At2g34160-like1.5e-4580.56Show/hide
Query:  TMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        T +I+   +TE+QKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  TMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVE
        KSEKFDSLM+A   AT   EA AGG      GEEKK   E   E
Subjt:  KSEKFDSLMSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVE

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.9e-3778.85Show/hide
Query:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        +T+SQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MSAA
        M+AA
Subjt:  MSAA

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein2.6e-3772.57Show/hide
Query:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        + ++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD L
Subjt:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MSAAAGATAGPEA
        M+AA       EA
Subjt:  MSAAAGATAGPEA

AT2G34160.1 Alba DNA/RNA-binding protein1.4e-3878.85Show/hide
Query:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        +T+SQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  STESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MSAA
        M+AA
Subjt:  MSAA

AT3G04620.1 Alba DNA/RNA-binding protein1.2e-4272.03Show/hide
Query:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        +A  + +   + E+ KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIV
Subjt:  MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMSAAA-GATAGPEAGAGGAATAAAGEEKKAEAE
        LGKS+KFDSL+     G T   EA A   A+  A EE  A  E
Subjt:  LGKSEKFDSLMSAAA-GATAGPEAGAGGAATAAAGEEKKAEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGATGTCCATATCGGAAGTCACCAGTACTGAATCTCAGAAGAAGAACAGAATTCAGGTTTCCAATACCAAGAAACCGCTCTTCTTTTACGTCAATCTTGCTAA
GAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACTGTTGTCACAATTGCTGAGATTTTAAAGAACAATGGGCTGGCTACAGAGA
AGAAAGTTTTGACATCTACAGTGGGTATGAAGGATGAGAACAAAGGCCGATTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTG
ATGAGTGCGGCGGCGGGCGCCACAGCTGGGCCAGAGGCTGGTGCTGGTGGTGCTGCTACTGCAGCTGCTGGTGAAGAGAAAAAAGCAGAGGCTGAAACCAAGGTGGAGAA
GTAG
mRNA sequenceShow/hide mRNA sequence
GCCAGTTCCATATTTTCCCGCTCATCTCAAAATTTTCCCGAGAAAATTACCAGAGAGAAAATCTGTTTCTTTGTTTGGTTGATCTGCGAGAGGAAGAGAAAAATATAGTG
TGAGAGATTGAGTGTGGAAACAAGCTCTAGAAATGGCGACGATGTCCATATCGGAAGTCACCAGTACTGAATCTCAGAAGAAGAACAGAATTCAGGTTTCCAATACCAAG
AAACCGCTCTTCTTTTACGTCAATCTTGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACTGTTGTCACAATTGCTGA
GATTTTAAAGAACAATGGGCTGGCTACAGAGAAGAAAGTTTTGACATCTACAGTGGGTATGAAGGATGAGAACAAAGGCCGATTGGTTCAGAAAGCCAAGATTGAGATTG
TTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATGAGTGCGGCGGCGGGCGCCACAGCTGGGCCAGAGGCTGGTGCTGGTGGTGCTGCTACTGCAGCTGCTGGTGAAGAG
AAAAAAGCAGAGGCTGAAACCAAGGTGGAGAAGTAGAAATTTGAATCTGAGAATGTTACATTGTTGTTGTTTAAAGAATCAAAACGCAATACTATTAGGAATTGCTCTCT
CTAGTATTCTTGTTTTTCAACAGTCACAGTTTTGAATGAGTTGCCATGCCCCTCATCACCCCCCCCCCCCCCAAGAAAAACCAATTTTCTTTCTGTGTTGCATTTGTTAC
TTCATGTTCATCTAATGAAGTGAATCTTTGAAATGGTATATGCTCTTTTGGTGTTA
Protein sequenceShow/hide protein sequence
MATMSISEVTSTESQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
MSAAAGATAGPEAGAGGAATAAAGEEKKAEAETKVEK