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Sed0018686 (gene) of Chayote v1 genome

Gene IDSed0018686
OrganismSechium edule (Chayote v1)
DescriptionCoiled-coil domain-containing protein 16
Genome locationLG06:37367298..37372107
RNA-Seq ExpressionSed0018686
SyntenySed0018686
Gene Ontology termsGO:0033260 - nuclear DNA replication (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0044773 - mitotic DNA damage checkpoint (biological process)
GO:0048478 - replication fork protection (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606988.1 Zinc finger protein 830, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKKDKRIDSPL+RYNEL+QPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

KAG7017962.1 Zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2792.54Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVMFY
        MDA+AKRKALFRAKLNAQKK+KRIDSPL+RYNELDQPVCRVCDIVLKSEAYWDAHQSSR+HHEVM Y
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVMFY

XP_004148048.1 zinc finger protein 830 [Cucumis sativus]5.3e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKKDKRIDSPL+RYNELDQPVCRVCD+VLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

XP_022143522.1 zinc finger protein 830 [Momordica charantia]2.4e-2692.31Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDAEAKRKALFR+KLNAQKKDKRIDSPL+RYNELDQPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

XP_022983328.1 zinc finger protein 830-like [Cucurbita maxima]6.9e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKK+KRIDSPL+RYNELDQPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

TrEMBL top hitse value%identityAlignment
A0A0A0LM08 Coiled-coil domain-containing protein 162.6e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKKDKRIDSPL+RYNELDQPVCRVCD+VLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

A0A6J1CQX3 Coiled-coil domain-containing protein 161.1e-2692.31Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDAEAKRKALFR+KLNAQKKDKRIDSPL+RYNELDQPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

A0A6J1GB85 Coiled-coil domain-containing protein 163.3e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKKDKRIDSPL+RYNEL+QPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

A0A6J1J7G2 Coiled-coil domain-containing protein 163.3e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKK+KRIDSPL+RYNELDQPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

A0A6J1KAT8 Coiled-coil domain-containing protein 163.3e-2690.77Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AKRKALFRAKLNAQKKDKRIDSPL+RYNEL+QPVCRVCDIVLKSEAYWDAHQSSR+HHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

SwissProt top hitse value%identityAlignment
Q63ZM9 Zinc finger protein 8308.2e-0639.34Show/hide
Query:  AEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE
        A+ + + L +AK       KRI+SPL +YN L    C VC+ ++KSE  W AH   ++H E
Subjt:  AEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE

Q6DJ13 Zinc finger protein 8304.8e-0642.86Show/hide
Query:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE
        + L +AK       KRI+SPL +YN L   +C VC+I +KSE  W AH   ++H E
Subjt:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE

Q8R1N0 Zinc finger protein 8309.1e-0537.5Show/hide
Query:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE
        + L R K       KRI+SP  +YN L Q  C +C+  +KSE  W  H   ++H E
Subjt:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE

Q96NB3 Zinc finger protein 8302.0e-0435.71Show/hide
Query:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE
        + L + K       KRI+SP  +YN L Q  C +C+  +KSE  W  H   ++H E
Subjt:  KALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHE

Q9M8S7 Protein ABA AND ROS SENSITIVE 15.1e-2475.38Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AK+KA+FR+KLNA+KKD RIDSPL+RYNE DQPVCRVC++VLKSE+ WD HQ+SRKHHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

Arabidopsis top hitse value%identityAlignment
AT3G02860.1 zinc ion binding3.6e-2575.38Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AK+KA+FR+KLNA+KKD RIDSPL+RYNE DQPVCRVC++VLKSE+ WD HQ+SRKHHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM

AT3G02860.2 zinc ion binding3.6e-2575.38Show/hide
Query:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM
        MDA+AK+KA+FR+KLNA+KKD RIDSPL+RYNE DQPVCRVC++VLKSE+ WD HQ+SRKHHE +
Subjt:  MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGAAGCGAAGCGAAAGGCATTGTTTCGTGCGAAATTGAACGCCCAGAAGAAGGATAAGCGCATCGATTCTCCTCTCCTAAGGTACAATGAACTGGACCAACC
TGTCTGTAGGGTGTGTGATATTGTCTTGAAATCAGAGGCTTACTGGGATGCACACCAGTCCTCTCGTAAGCATCATGAGGTGATGTTTTACAGTTTCAATATTCTTATAT
TGTTCAATGGCGCATTTGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGAAGGAAGGAGTTTAGAGTGAGTTAGGTCTGGAAGGACGAAGAAACAACGATCAAATGGATGCTGAAGCGAAGCGAAAGGCATTGTTTCGTGCGAAATTGAAC
GCCCAGAAGAAGGATAAGCGCATCGATTCTCCTCTCCTAAGGTACAATGAACTGGACCAACCTGTCTGTAGGGTGTGTGATATTGTCTTGAAATCAGAGGCTTACTGGGA
TGCACACCAGTCCTCTCGTAAGCATCATGAGGTGATGTTTTACAGTTTCAATATTCTTATATTGTTCAATGGCGCATTTGATTTTTGACGTTGAAAATAAGAGTTTCTAT
TGCCTGTAGTTTGTTTTTTATGGTAAAAATGAAAGAATACAAGGACGTATATTAAAATAAACCCTAAAGAAACGGAGGAGATCGGCACTAGCTACGAAAGTGTCGACATT
GTAGATAAAGAAAACCAAGACCATAAATGCAAAAAAGACAAGATTCTATTGCTTGTAGTTTGAAAACATAACACAATCTTGAAGGAATAACTATTTATTTTCGTGTGCCC
TTTGTTTTGTTCTTTCGATTCTTTTTTCAGTGAAAGTTTGGTATTTCAAAAATAAAATAAGGAATTGCTATTTATTTGGATATTTAGTTTATTCCTCTCAAGGCTCTTTA
TATTCAACAAAATCTCCTCTTCAGAAAAAGGGAGAGCGTACAGATTGTTATCAAAGTTAGAAACATCCCAACTAATGGTGATAGTTCTCTTTGGCACAAAGCTAGAGTGT
AGACCGTTTTCATAGGTGGTCTCCCTTGTTTGCTTGGACTGTTTTTTATGACCCTTTGTTTTGTTTTATCTTTTCATTCTTTTTTCATTATAAGGTTGGTTTACAATATA
AAAAAGAAACCCTTTTCAAACTTCTTGGATTGATAACTTACTTTCATCCTAAAGGATTAACATGCCACATGAACGACCATAGGCTTTCCACAGAAGAGAGAAAAAAGGGG
GAAGGGGGCATATCCAAATTTGGTTTTCAATTGCTGTAGATAGGAAACTTAAAGCCCTAAATCCTAATCCGATGGAAGGTTGAAATAGAGAGGGAACAAAAATAGATAAC
AAAATCACAATCAATGTAGTATCAACCATTGGTGTTATGTTATGTCACTGAATTGCCCATTTTTTAGCATCTTTGATGGAGAAGGAGATACCATTTAAGGATGTATGAAA
TATGAATGAAAAGAAATGAACTTATCATTTTTCTAGTTTATTTTTCAAATTTTTACTGACACGGATGAAGATGGAGTGATAGAGGAGAACTCGAATGATTCTGTAATACC
TGAAATGTGGTTATGGGATTGTGGATTGGTGGATTGAGAGGTTTGTGTTATTTCTCTGATATTTCTTCTAAGGTGGGTGAAGGGAAAGCGTGGGTTCGAAATTAGTTCTT
CGTTGTAGAGATTGATAATGTTGATGTCCTGTTTTTTAGTGGGAGCTTATACGAAGCTTAAGAGTTCTAAAGAGGCGTTAAGTTACAGGTTTGGAAGAGTCTAATTGGGG
GTGATTGTAACAATTCATGAGCGGGCTTGCAATTGGTCCACCATCTGAGAGTTAAGTAGTCCCAAACCTTGGAGTTCTATTGTTCTTCATTTGTGAATAAGTTACGTTAG
TGTGAATTTCACCTTTTTTTTTGTGTACCTTGTGTGCATAGGTGCGGGAAGATTCAGAATCGGGCAACACGACAGAAAGTTTCCTCGTCAACAGTTTGAGCAAAGAACAA
GGAATGAAGTAATATAAGAAAAGACAATTCAGCAAAGACAAGGCAGAACAAGAAAGGCTTAGTGTCTCAACACTCTTCAGTGACATAATATAACACCATGTTTTCACTAC
CCTTGTAAAAGTATCAATTTCGATTTTCCTGTAATCCAAAAAATAGAGACAACAAAGTAAGATGAATTCGTACAGGATATGCTTGGCTTTGGGATAATTACTGTTACGCT
ATGGTTAATTGAGGAGGTGATTCTAAGTTCACCTTTTTACAAGAAATACAAAGTTTGGATGGGACTCCGTTTTCTT
Protein sequenceShow/hide protein sequence
MDAEAKRKALFRAKLNAQKKDKRIDSPLLRYNELDQPVCRVCDIVLKSEAYWDAHQSSRKHHEVMFYSFNILILFNGAFDF