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Sed0018689 (gene) of Chayote v1 genome

Gene IDSed0018689
OrganismSechium edule (Chayote v1)
Descriptionmitochondrial import inner membrane translocase subunit Tim9-like
Genome locationLG02:44685417..44688904
RNA-Seq ExpressionSed0018689
SyntenySed0018689
Gene Ontology termsNA
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38573.1 Tim10/DDP family zinc finger [Parasponia andersonii]4.3e-4091.4Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+ LPEEDKL+M++MIDQLQIRDSLRMYNSLVERCFTDC+D FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_004137789.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus]3.5e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMA+MIDQLQIRDSLRMYNSLVERCFTDC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022145535.1 mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia]2.1e-4295.7Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLP+EDKLKMASMIDQLQIRDSLRMYNSLVERCFTDC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022934857.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata]3.5e-4295.7Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMA+MIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_042940042.1 mitochondrial import inner membrane translocase subunit Tim9 [Carya illinoinensis]1.3e-3990.32Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLE LPEEDK++M++MI+QLQIRDSLRMYNSLVERCFTDCVD FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

TrEMBL top hitse value%identityAlignment
A0A0A0LFK3 zf-Tim10_DDP domain-containing protein1.7e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMA+MIDQLQIRDSLRMYNSLVERCFTDC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A5D3DN53 Mitochondrial import inner membrane translocase subunit Tim91.7e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMA+MIDQLQIRDSLRMYNSLVERCFTDC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1CUR4 mitochondrial import inner membrane translocase subunit Tim9-like1.0e-4295.7Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLP+EDKLKMASMIDQLQIRDSLRMYNSLVERCFTDC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1F3Y8 mitochondrial import inner membrane translocase subunit Tim91.7e-4295.7Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMA+MIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1IZ98 mitochondrial import inner membrane translocase subunit Tim91.7e-4295.7Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMA+MIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

SwissProt top hitse value%identityAlignment
O74700 Mitochondrial import inner membrane translocase subunit TIM93.1e-1747.44Show/hide
Query:  LEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L  +++ +   +++Q Q++D +R+Y++LVERCFTDCV++F    LT +E+TC+ +C+EKFLKHS RVG RF E N
Subjt:  LEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

P57745 Mitochondrial import inner membrane translocase subunit Tim91.8e-1748.72Show/hide
Query:  LEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ + + +I+  Q++D +R+Y++LVERCFTDCV++F    LT +E+TC+ RC+EKFLKHS RVG+RF E N
Subjt:  LEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q9XGX7 Mitochondrial import inner membrane translocase subunit Tim91.5e-4084.95Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK ML DL+GLPEEDK++MA+M+DQLQIRDSLRMYNSLVERCFTDCVD F+RK+L KQEE+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX8 Mitochondrial import inner membrane translocase subunit Tim91.2e-4086.02Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK ML DL+ LPEEDKLKMASMI+QLQIRDSLRMYN+LVERCFTDCVD+F+RK+L KQEETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX9 Mitochondrial import inner membrane translocase subunit TIM97.2e-3882.8Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD  M+A L+GLPEEDK KMASMIDQLQ+RDSLRMYNSLVERCF DCVD+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Arabidopsis top hitse value%identityAlignment
AT3G46560.1 Tim10/DDP family zinc finger protein5.1e-3982.8Show/hide
Query:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD  M+A L+GLPEEDK KMASMIDQLQ+RDSLRMYNSLVERCF DCVD+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGGGCATGCTCGCTGATTTGGAGGGTCTTCCCGAAGAAGACAAGCTCAAAATGGCCTCCATGATCGACCAGCTCCAGATCCGCGACAGTCTGAGAATGTACAA
CTCATTGGTCGAGAGATGCTTCACGGATTGCGTAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCCTGAAGC
ACTCAATGCGCGTCGGTATGAGATTCGCCGAGCTCAATCAAGGAGCTGCCACCTCCGATTAA
mRNA sequenceShow/hide mRNA sequence
CTTGAAGGACCATTTAGCAACAAAATTTATTGCTTCCCGAAGCTACAAATTCTGGTAATTGCGGCGATACAAATAACCCAACGAGAAGCTAAAACCCTAAACCCCTTTTT
GCTTTCGTTGGAATCGAAGATGGACAAGGGCATGCTCGCTGATTTGGAGGGTCTTCCCGAAGAAGACAAGCTCAAAATGGCCTCCATGATCGACCAGCTCCAGATCCGCG
ACAGTCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTCACGGATTGCGTAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAGGAAACATGTGTACGTAGGTGT
GCCGAGAAGTTCCTGAAGCACTCAATGCGCGTCGGTATGAGATTCGCCGAGCTCAATCAAGGAGCTGCCACCTCCGATTAAAGTCGCATCAGAGGATGCTCAGACATATG
CTCGAGACTTTCAGTTTCACATCTGGTTTACGTATGTGTCTTCCATATTCTTGAGCAGTTCTTTAATTTTCTGCATTTTATTATGTTTCTTCCCTTTATGTTGCAACTGG
ATTTAAGTTTGCCTTTCATCTCCATCAGGATGATAACTTTTTCACTCAAGCATGTAAGGCATACAATCGAAGCTGGTTTAACTTAGTTTTTTTTTTCTCTTTTGGTAATA
GTGCCTTTTTCTTCATTCTCATAACCAATTTGAAAGAAAATGATTGGAGATCAAATCTTCAACGGTTAGATGAACATAAATTCGTTG
Protein sequenceShow/hide protein sequence
MDKGMLADLEGLPEEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD