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Sed0018708 (gene) of Chayote v1 genome

Gene IDSed0018708
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:1591257..1592380
RNA-Seq ExpressionSed0018708
SyntenySed0018708
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]4.3e-0534.78Show/hide
Query:  GRGRF--LWEVAVAVLLVSAILCSNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA
        GR  F  L  V V V+ ++ +  S  C  + + +    +YGG    E++       I+  + RF    G K +T  T   N   CNNG GNQ G CGG A
Subjt:  GRGRF--LWEVAVAVLLVSAILCSNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA

Query:  SNTQDCNKYANNGPC
        +N Q CN+Y    PC
Subjt:  SNTQDCNKYANNGPC
KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]7.9e-0738.26Show/hide
Query:  MGRGRFLWEVAVAVLLVSAILC-SNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA
        MG     W VAVA L+V+ ILC SN   A+++G  R  +  G + +EL++          + RF +F+  KV TD+T N    SC NG GN  G C G+ 
Subjt:  MGRGRFLWEVAVAVLLVSAILC-SNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA

Query:  SNTQDCNKYANNGPC
        +N + CN YA    C
Subjt:  SNTQDCNKYANNGPC
TrEMBL top hitse value%identityAlignment
A0A5D3BNE4 Uncharacterized protein2.1e-0534.78Show/hide
Query:  GRGRF--LWEVAVAVLLVSAILCSNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA
        GR  F  L  V V V+ ++ +  S  C  + + +    +YGG    E++       I+  + RF    G K +T  T   N   CNNG GNQ G CGG A
Subjt:  GRGRF--LWEVAVAVLLVSAILCSNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTA

Query:  SNTQDCNKYANNGPC
        +N Q CN+Y    PC
Subjt:  SNTQDCNKYANNGPC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGGTCGTTTTCTGTGGGAAGTAGCAGTGGCAGTGCTGCTGGTAAGCGCGATCCTTTGTTCGAACAAATGCGAAGCAGCAGCGATGGGGGTGGCTCGGGGAGG
TAGCTACGGCGGAAACATGGCGTTGGAGTTGATGATGGTGGGCAGCCAAGTTGATATATTTCCTCTGCTACCTCGGTTTCGCGACTTTGAAGGAGACAAAGTCATAACAG
ACCAAACCAGCAACCAGAATGCCAGTTCTTGTAACAACGGGGCCGGAAACCAAAACGGCGCCTGCGGCGGCACTGCTAGTAACACACAAGACTGCAACAAATATGCCAAC
AATGGCCCCTGTCCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
AACATAAACTTTGAAACAAAAAAAGAAAAAGAGAAAGAATAAGCCAAAGCAAAAGCACAAAAGCAAAACCATAATGGAGAGAAAGAGCAACATTCCCCCATGAAAAATAT
TGAGTCAAACTCACATTTCCATCTAGAATCTTAGACTACTCGGTTCATTACCAATTAATTTTGAAATAGTTGCTACAACCTCGTTTGATAACGATTTTGTTTCTATTTGT
TGACCGGTGGCCACTATAAGTAACACAGCTTCCCATTCCATCAACAAAGCACCCTCTGAGTAAAGCTTGAAAGAAAAAGAAAGAGGAAGAAATGGGTCGTGGTCGTTTTC
TGTGGGAAGTAGCAGTGGCAGTGCTGCTGGTAAGCGCGATCCTTTGTTCGAACAAATGCGAAGCAGCAGCGATGGGGGTGGCTCGGGGAGGTAGCTACGGCGGAAACATG
GCGTTGGAGTTGATGATGGTGGGCAGCCAAGTTGATATATTTCCTCTGCTACCTCGGTTTCGCGACTTTGAAGGAGACAAAGTCATAACAGACCAAACCAGCAACCAGAA
TGCCAGTTCTTGTAACAACGGGGCCGGAAACCAAAACGGCGCCTGCGGCGGCACTGCTAGTAACACACAAGACTGCAACAAATATGCCAACAATGGCCCCTGTCCTGCTT
AGCCTTTAACCTACATTCCCACTGTTTCTGTGTATGTTGTTTGTTTAATCATTTCTCTGTTTCTCTGTTTTGTGTTTCTTATGATGTGGTCCTCTGTTTATTGTGGAGTT
AATATTTTTGTGGCTTTGGTTTTGGTTTGTGTGTGTGTCAAACAAGAACAATAACATTGTTCATCTTCTTCTCTACATCAATGTATCTCCCCAAATGTGTTTGTCATTCT
TTTGCTCATTTATGTTTCTTTTTCTCTGCTAACTATGCAGAATTTTTGTTCCCGGTGGTTGGACTCTCAATACTAATACATTAAATTGTAAAAAATAATTTTATTCATTA
ACTTTACGCCACCATCGACTGAACCCATATATTTTGTTCGGAATTTCTTAGATGAAATGTTAAGAACCAGTTATGTTAGACTACGAATGACTCAGTTTGGGATCTCGTTG
ACTGGTCAACGAGTCGGAGTCTAG
Protein sequenceShow/hide protein sequence
MGRGRFLWEVAVAVLLVSAILCSNKCEAAAMGVARGGSYGGNMALELMMVGSQVDIFPLLPRFRDFEGDKVITDQTSNQNASSCNNGAGNQNGACGGTASNTQDCNKYAN
NGPCPA