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Sed0018714 (gene) of Chayote v1 genome

Gene IDSed0018714
OrganismSechium edule (Chayote v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationLG08:29143353..29154639
RNA-Seq ExpressionSed0018714
SyntenySed0018714
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935010.1 uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]5.7e-2590.91Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

XP_022935012.1 uncharacterized protein LOC111442002 isoform X2 [Cucurbita moschata]5.7e-2590.91Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

XP_022984013.1 uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]3.7e-2489.39Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

XP_023528840.1 uncharacterized protein LOC111791650 isoform X1 [Cucurbita pepo subsp. pepo]4.4e-2592.42Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML LQRAFRTIH+TVDAPQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

XP_023528842.1 uncharacterized protein LOC111791650 isoform X3 [Cucurbita pepo subsp. pepo]2.8e-2490.91Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML L RAFRTIH+TVDAPQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

TrEMBL top hitse value%identityAlignment
A0A6J1DMU7 uncharacterized protein LOC111021468 isoform X21.3e-2284.62Show/hide
Query:  LGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        + L RAFRTIH+TV+AP++TSFALRAPK+VEVKFADGS+FNLSAEF+RIYSPAVDAKVRSIGGEK
Subjt:  LGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

A0A6J1F4E2 uncharacterized protein LOC111442002 isoform X22.8e-2590.91Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X12.8e-2590.91Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

A0A6J1J985 uncharacterized protein LOC111482460 isoform X21.8e-2489.39Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X11.8e-2489.39Show/hide
Query:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVRSIGGEK
Subjt:  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).2.4e-1355Show/hide
Query:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK
Subjt:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).7.0e-1344.83Show/hide
Query:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK-----DCISTSLAEPPCPQGVGVVAAV
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK       +    AEP    GV +  +V
Subjt:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK-----DCISTSLAEPPCPQGVGVVAAV

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).2.4e-1355Show/hide
Query:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK
Subjt:  RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTAGGTTTGCAAAGAGCTTTCCGGACGATCCATTCCACCGTCGATGCTCCACAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTAGAGGTTAAATTTGC
AGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCGTGAGAATATATAGCCCAGCTGTTGATGCCAAGGTCCGGTCAATTGGGGGTGAAAAGGATTGTATCAGTACTTCCC
TCGCAGAGCCACCTTGTCCTCAAGGTGTTGGGGTAGTAGCGGCGGTGGCTGCGGAGGCAGCAGTGGCATCGGTGACGGTGGTGCGTCGGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATTAACAATCCTCACCAAAATCTCCATCAAACGAAGCTATGATAACTCTTTCATATAAAACTTCATCCTAAGGACCCAAATCTCCAATTTCTAATCATTCAAAGGCCCAA
CAGATTGTCATCCAAGGAACCACTAACAATATTCACTGATTTTTAAAGTGAAAAGAAAATTTTATTATAAAATAGAGGATCTTGCAAGATTTGAGAATGAACTTGCAATT
GAATCGAATGGAGGAATGATGTTAGGTTTGCAAAGAGCTTTCCGGACGATCCATTCCACCGTCGATGCTCCACAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGT
AGAGGTTAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCGTGAGAATATATAGCCCAGCTGTTGATGCCAAGGTCCGGTCAATTGGGGGTGAAAAGGATT
GTATCAGTACTTCCCTCGCAGAGCCACCTTGTCCTCAAGGTGTTGGGGTAGTAGCGGCGGTGGCTGCGGAGGCAGCAGTGGCATCGGTGACGGTGGTGCGTCGGTGGTAG
TGGTGGAGGTGGTGGCGACAGTGGTGACGGTGGCAGTGGCAGCAGTGGTGGTGGTGCGTCGATGGCAGCGGCGGTGGTGCAGTGGTGAAAGCGGAGGTGGTGGCGGAGGC
AGCGGTGATGGCGGCGGAGGTGGCGGCGGCAATGTCAGAGGTGGTGGCGGTGGCGGTGGCGGGGTCAAAACCCTAGACGTCACTTTAACTTGAATTGACTTCATCTTCTC
TGATTGTTTTTCTTTTTCTTCCATAATAATTTCCTCTTTGAGCTCTCTAAGAGAATTATTTAGGTCACTGCACCTCTTCCCTAGCTGATAATATGAGTGGTTCAGCCTTG
ATGGACTTTCTCCTTTCAAACTCAAAGTCGGTAAGGGATAATTTCTTTACTTTTCTATCAATGATATCAAGTTCACCTTGTATCTTCAAAATCAATTCTTTATGGTGGCC
AAAATTGCGATGGTTTCTCCACTTTTAAGTTGTTTTTTTTAAAGACTTTGAGTTTCATAATAAAGCCATGACCAGGCCAGCACTGTAGCCAATTCTTCATAAAGTCTGAG
AAGGAACCATGAGTCAATAAGCATTCATGAAACGTTATGGGGTGGGTCCCCAAACTTCTTTTCCCAGAGAGGCCAATTGGGATCAAGAGAGTCCAATAGGGAAATGATCC
AAGCATAATGTCTCAAGCCTTCTAGCTGTAATATGGCCAAACTTTAAGGAAATTTCTTCTGCTAATAAAAACTTACTGCTGAATTGTGTTAAATCATCAATCAACCCAAA
AGCTTAAGCTGGTGGGTTGGAGTAAATTTAATTATATCTACCAACACTCTCCATCACTTGTGGGTTTAAAAATTTGAAAAATGCCCTGGAAGTGAAATTCAATTTTAATT
TGGGAGGAAATAACTTAGCAGAGATTCGAACTCAGGACATCCTGCTTTGATAAGAAATTAATTTTATAATTGAGAATAAAATTTCATTATACTTTCACACTTTTACTATT
GAGGAAGGGGTTTATTTTATAGAGAAAAAACCCAACAAATAATTAACAAGATTCTCCTAAAAATATAGGATACAAAATAAATTGAGAATTTTAAGGAAATAACCAACACC
TATTGATCAATGAGAAAGTTGGTTCGCATCTGAGGTTAGACCAAGTGAACTTCCCATTACATAAAACAAATCCAGTAGGTTCTACAATGAAAGAGTTGAA
Protein sequenceShow/hide protein sequence
MMLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEKDCISTSLAEPPCPQGVGVVAAVAAEAAVASVTVVRRW