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Sed0018727 (gene) of Chayote v1 genome

Gene IDSed0018727
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:5980013..5980578
RNA-Seq ExpressionSed0018727
SyntenySed0018727
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595568.1 hypothetical protein SDJN03_12121, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1384.31Show/hide
Query:  MSSSRFGNTIPILICVALRKPSLVFRDVSLFLVDLIAAAAAAVRLSRSLPP
        MSSSRFGNTIPIL+CVALRKPSLVFRDVSLF++DLIA AA+A+R SRSL P
Subjt:  MSSSRFGNTIPILICVALRKPSLVFRDVSLFLVDLIAAAAAAVRLSRSLPP
KAG6603548.1 hypothetical protein SDJN03_04157, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1362.5Show/hide
Query:  MSSSRFGNTIPILICVALRKPSLVFRDVSLFLVDLIAAAAAAVRLSRSLPPPPVTLAERYSPISLMIVRHNR
        MSSSRFG++I IL+CVALRK SL+FR VS+ + DLIA AA+A+R SR    P V L+ERYS +SLMI+R++R
Subjt:  MSSSRFGNTIPILICVALRKPSLVFRDVSLFLVDLIAAAAAAVRLSRSLPPPPVTLAERYSPISLMIVRHNR
TrEMBL top hitse value%identityAlignment
A0A0A0KXR7 Uncharacterized protein5.4e-0450.67Show/hide
Query:  RFGNTIPILIC-VALRKPSLVFRDVSLFLVDLIAAAAAAVRLSR-----SLPPPPVTLAE-RYSPISLMIVRHNR
        RFGNTIPIL+  V LRK  L+FR  S F+ DLIA A++A+R  R     SL     +  + RYSP+SLMI+R +R
Subjt:  RFGNTIPILIC-VALRKPSLVFRDVSLFLVDLIAAAAAAVRLSR-----SLPPPPVTLAE-RYSPISLMIVRHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTTCAAGATTTGGGAATACGATCCCCATTCTCATCTGCGTGGCTCTCCGAAAACCCTCCCTCGTTTTTCGCGACGTCTCGCTCTTCCTCGTCGATCTCATCGC
CGCCGCCGCCGCCGCCGTCCGGCTGTCCCGCTCCCTTCCCCCGCCGCCCGTCACCCTCGCCGAGAGGTACTCTCCGATCTCCTTGATGATCGTTCGCCATAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAAATAGAAAGGGAAAAGGGTAGAGTAGTAAATAACCAATGGGTAGAGCACCTCGAAACTAACGCAGAGAGTAGAGAAAGAAAGTTGAAAAAAAAAGTGAAAAACAA
AGAGATTTGGGAATGTCGTCTTCAAGATTTGGGAATACGATCCCCATTCTCATCTGCGTGGCTCTCCGAAAACCCTCCCTCGTTTTTCGCGACGTCTCGCTCTTCCTCGT
CGATCTCATCGCCGCCGCCGCCGCCGCCGTCCGGCTGTCCCGCTCCCTTCCCCCGCCGCCCGTCACCCTCGCCGAGAGGTACTCTCCGATCTCCTTGATGATCGTTCGCC
ATAACCGTTGATCTCTGTTTCCTCTCCTCTTCTTCATTCGATCTTCGCGTTTACTGTTTTTCGTCAATCTGTGTTGTTTGCTTTTTCTGCAAGTTTATGGAGATTTAGGT
CTGAATGCTTTTGTGATCTGATGGAACCAATCGATTGTGGTTTTCTGATCTGATTTCGATTTACAGGATGAACCCATTTCTGTTTCGATCTCATCGATTATTGTTTAATT
AAAAGAACTTTAGATA
Protein sequenceShow/hide protein sequence
MSSSRFGNTIPILICVALRKPSLVFRDVSLFLVDLIAAAAAAVRLSRSLPPPPVTLAERYSPISLMIVRHNR