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Sed0018728 (gene) of Chayote v1 genome

Gene IDSed0018728
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:7767741..7768666
RNA-Seq ExpressionSed0018728
SyntenySed0018728
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600791.1 hypothetical protein SDJN03_06024, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4581.15Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MEDPNMLAADCI ICCCCECLALQI LLLLLKLP KL+RKTRE AKR  R  +KE KM   VMSGY+DE+RG+SN  CMRNEGDGL LSCCMEEIE+VME
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWGKANSISD
        DL EKGEFGFGSFWGK NSISD
Subjt:  DLHEKGEFGFGSFWGKANSISD

KAG7017145.1 hypothetical protein SDJN02_22257, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-4164.94Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLAL I+LLLLLKLPCKL+RKTR+ AKR  R  EKE KMV       EDE+RG SNG CMR+E DGL LSCCMEEIERVM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT
        DLHEKGEFGFGSFWG K NS+S       G CR+       D+  +L +VI +T
Subjt:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT

KAG7031430.1 hypothetical protein SDJN02_05470, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-4577.27Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MEDPNMLAADCI ICCCCECLALQI LLLLLKLP KL+RKTRE AKR  R  +KE KM   VMSGY+DELRG+SN  CMRNEGDGL LSCCMEEIE+VME
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCR
        DL EKGEFGFGSFWGK NSIS       G CR
Subjt:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCR

XP_022928895.1 uncharacterized protein LOC111435666 [Cucurbita moschata]1.8e-4165.58Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLAL I+LLLLLKLPCKL+RKTR+ AKR  R  EKE KMV       EDE+RGISNG CMR+E DGL LSCCMEEIERVM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT
        DLHEKGEFGFGSFWG K NS+S       G CR+       D+  +L +VI +T
Subjt:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT

XP_023551308.1 uncharacterized protein LOC111809163 [Cucurbita pepo subsp. pepo]1.2e-4070.59Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLAL I+LLLLLKLPCKL+RKTR+ AKR  R  EKE KMV       EDE+RGISNG CMR+E DGL LSCCMEEIERVM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREHD
        DLHEKGEFGFGSFWG K NS+S       G CR+ +
Subjt:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREHD

TrEMBL top hitse value%identityAlignment
A0A0A0LKX5 Uncharacterized protein1.5e-3868.42Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLALQI+LLL LKLP KL+RKTRE AK+  R  EKE KMV +   G  +E+RGISNG CMRNE  GL LSCCMEEIE+VM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCRE
        DLHEKGEFGFGSFWG  N+ S       G CR+
Subjt:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCRE

A0A1S3C4I0 uncharacterized protein LOC1034969241.6e-4062.5Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLALQI+LLLLLKLPCKL+RKTRE AK+     EKE KMV +      +ELRGISNG CMRNE  GL LSCCMEEIE+VM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCREH-----DIVARLFKVILTT
        DLHEKGEFGFGSFWG  N       + +G CR+      ++  +L +VI +T
Subjt:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCREH-----DIVARLFKVILTT

A0A5D3B961 Uncharacterized protein1.6e-4062.5Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLALQI+LLLLLKLPCKL+RKTRE AK+     EKE KMV +      +ELRGISNG CMRNE  GL LSCCMEEIE+VM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCREH-----DIVARLFKVILTT
        DLHEKGEFGFGSFWG  N       + +G CR+      ++  +L +VI +T
Subjt:  DLHEKGEFGFGSFWGKANSISDDPESHNGQCREH-----DIVARLFKVILTT

A0A6J1ESS6 uncharacterized protein LOC1114356668.7e-4265.58Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLAL I+LLLLLKLPCKL+RKTR+ AKR  R  EKE KMV       EDE+RGISNG CMR+E DGL LSCCMEEIERVM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT
        DLHEKGEFGFGSFWG K NS+S       G CR+       D+  +L +VI +T
Subjt:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREH------DIVARLFKVILTT

A0A6J1HXD6 uncharacterized protein LOC1114689063.6e-4069.85Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME
        MED N LAADCIVICCCC+CLAL I+LLLLLKLPCKL+RKTR+ AKR  R  EKE KMV       EDE+RG SNG CMR+E DGL LSCCMEEIERVM+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVME

Query:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREHD
        DLHEKGEFGFGSFWG K NS+S       G CR+ +
Subjt:  DLHEKGEFGFGSFWG-KANSISDDPESHNGQCREHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26140.1 unknown protein9.3e-1235.59Show/hide
Query:  EDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVMED
        ED    AADC+V+ CCC+CL LQ+ + +  K+P KL +K ++  KRI       GK ++  M   ++E     NG       +G   S C E+I+R++++
Subjt:  EDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVMED

Query:  LHEKGEFGFGSFWGKANS
        L     F FGSFW   +S
Subjt:  LHEKGEFGFGSFWGKANS

AT1G68700.1 unknown protein3.4e-0635.37Show/hide
Query:  RRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVMEDLHEKGEFGFGSFWGKANSISDDPESHNGQ
        RR G K+ +  E V+   +D+ R          E  G  +S CME++E ++++L  KGEF FGSFW + +S ++D +  N Q
Subjt:  RRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVMEDLHEKGEFGFGSFWGKANSISDDPESHNGQ

AT3G25597.1 unknown protein1.4e-1542.86Show/hide
Query:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKR--IRRHGEKEGKMVE-RVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIER
        MED N  AADC+V+ CCC CL LQI + + L LP KL++ TR+   +  I R  ++ G   E R  +  + E R  S  + M  EG G     C+EE+E+
Subjt:  MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKR--IRRHGEKEGKMVE-RVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIER

Query:  VMEDLHEKGEFGFGSFWGK
        V+E+  + GEF FGSFWG+
Subjt:  VMEDLHEKGEFGFGSFWGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCCGAACATGCTAGCAGCCGACTGTATTGTCATTTGCTGTTGTTGCGAATGCCTGGCGCTGCAGATCGTTCTCCTATTATTACTCAAGCTTCCATGTAAACT
CTTACGAAAGACGAGAGAACTCGCCAAAAGAATACGAAGACATGGAGAAAAAGAAGGAAAGATGGTTGAGCGAGTAATGAGTGGTTATGAAGATGAGCTTAGAGGAATTA
GTAATGGAATATGTATGAGGAATGAAGGAGATGGGTTGCGTTTGAGTTGTTGTATGGAAGAGATTGAGAGAGTGATGGAGGATTTACATGAGAAGGGAGAGTTTGGTTTT
GGAAGCTTTTGGGGAAAGGCTAATTCAATTTCAGATGACCCGGAGAGCCACAACGGGCAGTGCAGAGAACACGACATTGTTGCCCGGTTATTTAAGGTCATATTGACCAC
TAGGCCACTTCATGATGCTTGTATAAGCGAAAGTGAAAGTGATCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCCGAACATGCTAGCAGCCGACTGTATTGTCATTTGCTGTTGTTGCGAATGCCTGGCGCTGCAGATCGTTCTCCTATTATTACTCAAGCTTCCATGTAAACT
CTTACGAAAGACGAGAGAACTCGCCAAAAGAATACGAAGACATGGAGAAAAAGAAGGAAAGATGGTTGAGCGAGTAATGAGTGGTTATGAAGATGAGCTTAGAGGAATTA
GTAATGGAATATGTATGAGGAATGAAGGAGATGGGTTGCGTTTGAGTTGTTGTATGGAAGAGATTGAGAGAGTGATGGAGGATTTACATGAGAAGGGAGAGTTTGGTTTT
GGAAGCTTTTGGGGAAAGGCTAATTCAATTTCAGATGACCCGGAGAGCCACAACGGGCAGTGCAGAGAACACGACATTGTTGCCCGGTTATTTAAGGTCATATTGACCAC
TAGGCCACTTCATGATGCTTGTATAAGCGAAAGTGAAAGTGATCGTTAG
Protein sequenceShow/hide protein sequence
MEDPNMLAADCIVICCCCECLALQIVLLLLLKLPCKLLRKTRELAKRIRRHGEKEGKMVERVMSGYEDELRGISNGICMRNEGDGLRLSCCMEEIERVMEDLHEKGEFGF
GSFWGKANSISDDPESHNGQCREHDIVARLFKVILTTRPLHDACISESESDR