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Sed0018735 (gene) of Chayote v1 genome

Gene IDSed0018735
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:34811836..34815098
RNA-Seq ExpressionSed0018735
SyntenySed0018735
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2314103.1 hypothetical protein GH714_022257 [Hevea brasiliensis]4.9e-1952.17Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD
        MSTLK +T+K             GA   + F+++ P  L+SKK D +T + C   KEAAEAVK+ A+EVR+TS+FI +  +STA+SVS MTKE T+KVSD
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD

Query:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI
        A       AENI EKAKD+VSGA+GTAK+TTE +K+ I
Subjt:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI

RXH78485.1 hypothetical protein DVH24_002003 [Malus domestica]6.3e-1951.08Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNG---ALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK
        MS++K   TKLST         NG   +L  + F+      ++SKK D+E  DAC KTKEAA+AVK+ AKEVR+T +F+ +TV +TAKS++KM KE    
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNG---ALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK

Query:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD
            TEKVT+TAE +T K K TVSGAWG AK+TTE++KD
Subjt:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD

XP_015887495.1 uncharacterized protein LOC107422546 [Ziziphus jujuba]2.2e-1952.21Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD
        MSTLK  T K+S  F  +  K N    HKA +++    L+  K D++  D C KTKEAAEAV++ AKEVRET +F+ +TV +TAK V+KMTKE       
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD

Query:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD
        AT+KV++TA N TEKAK TVSGA G AK+ TE++KD
Subjt:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD

XP_021635998.1 uncharacterized protein At4g13230 [Hevea brasiliensis]1.7e-1952.9Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD
        MSTLK +TTK             GA   + F+++ P  L+SKK D +T + C   KEAAEAVK+ A+EVR+TS+FI +  +STA+SVS MTKE T+KVSD
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD

Query:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI
        A       AENI EKAKD+VSGA+GTAK+TTE +K+ I
Subjt:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI

XP_022138632.1 uncharacterized protein LOC111009748 [Momordica charantia]1.4e-4277.3Show/hide
Query:  MSTLKQYTTKLST-LFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVS
        MSTLK +T KLS  LFT    K N + GHKAFISSYPTL KSK  DEETVDAC KTKEAAEAVKESA+EVRETS+F+ +TVASTAK VSKMTKEVT KVS
Subjt:  MSTLKQYTTKLST-LFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVS

Query:  DATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFIDK
        +  EK+TKTAENITEKAKDTVSGAWGTAK+TT ++KDFIDK
Subjt:  DATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFIDK

TrEMBL top hitse value%identityAlignment
A0A498I8V5 Uncharacterized protein3.1e-1951.08Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNG---ALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK
        MS++K   TKLST         NG   +L  + F+      ++SKK D+E  DAC KTKEAA+AVK+ AKEVR+T +F+ +TV +TAKS++KM KE    
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNG---ALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK

Query:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD
            TEKVT+TAE +T K K TVSGAWG AK+TTE++KD
Subjt:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD

A0A6A6MP76 Uncharacterized protein2.3e-1952.17Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD
        MSTLK +T+K             GA   + F+++ P  L+SKK D +T + C   KEAAEAVK+ A+EVR+TS+FI +  +STA+SVS MTKE T+KVSD
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD

Query:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI
        A       AENI EKAKD+VSGA+GTAK+TTE +K+ I
Subjt:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFI

A0A6J1CBN9 uncharacterized protein LOC1110097486.8e-4377.3Show/hide
Query:  MSTLKQYTTKLST-LFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVS
        MSTLK +T KLS  LFT    K N + GHKAFISSYPTL KSK  DEETVDAC KTKEAAEAVKESA+EVRETS+F+ +TVASTAK VSKMTKEVT KVS
Subjt:  MSTLKQYTTKLST-LFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVS

Query:  DATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFIDK
        +  EK+TKTAENITEKAKDTVSGAWGTAK+TT ++KDFIDK
Subjt:  DATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKDFIDK

A0A6P4A219 uncharacterized protein LOC1074225461.1e-1952.21Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD
        MSTLK  T K+S  F  +  K N    HKA +++    L+  K D++  D C KTKEAAEAV++ AKEVRET +F+ +TV +TAK V+KMTKE       
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSD

Query:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD
        AT+KV++TA N TEKAK TVSGA G AK+ TE++KD
Subjt:  ATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD

M5Y331 Uncharacterized protein5.2e-1948.92Show/hide
Query:  MSTLKQYTTKLSTLFTLSIAKPNGA---LGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK
        MS+LK    KLS           GA   L  + F+++    L+SKK D+E  DAC KTKEAA+AVK+ AKEVR T +F+ +TV  T K+++KM K     
Subjt:  MSTLKQYTTKLSTLFTLSIAKPNGA---LGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEK

Query:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD
          D TEK+++TA+NIT+K K TVSGAWG AK+TTE++KD
Subjt:  VSDATEKVTKTAENITEKAKDTVSGAWGTAKSTTEVLKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04670.1 unknown protein3.7e-1742.42Show/hide
Query:  YTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSDATEKVT
        Y +KL  +   +         ++ F+S+ P  L+ K    E  + C K KEAAEAVKE AK+V+ET+++I +  ++TA  V+KMTK       D TEKVT
Subjt:  YTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSDATEKVT

Query:  KTAENITEKAKDTVSGAWGTAKSTTEVLKDFI
        +T + ITEKAK +VSG  GTAK+ T+++K+ I
Subjt:  KTAENITEKAKDTVSGAWGTAKSTTEVLKDFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTTTGAAACAGTACACCACAAAGCTTTCTACTTTGTTTACACTCTCAATAGCAAAACCCAATGGTGCTTTGGGCCACAAAGCCTTCATCTCCTCTTATCCTAC
ACTTTTAAAATCAAAGAAGGTGGATGAAGAGACAGTGGATGCATGTAACAAAACTAAAGAAGCAGCAGAAGCAGTGAAGGAAAGTGCTAAAGAAGTGAGGGAAACAAGTA
AATTCATTGGAGAAACTGTGGCTTCCACTGCCAAATCTGTATCAAAAATGACTAAAGAAGTAACAGAGAAGGTGTCTGATGCAACAGAGAAAGTAACAAAAACAGCAGAG
AACATAACAGAGAAAGCAAAGGACACTGTTTCAGGAGCATGGGGGACTGCAAAGAGCACTACTGAAGTTCTTAAAGATTTCATTGACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACTTTGAAACAGTACACCACAAAGCTTTCTACTTTGTTTACACTCTCAATAGCAAAACCCAATGGTGCTTTGGGCCACAAAGCCTTCATCTCCTCTTATCCTAC
ACTTTTAAAATCAAAGAAGGTGGATGAAGAGACAGTGGATGCATGTAACAAAACTAAAGAAGCAGCAGAAGCAGTGAAGGAAAGTGCTAAAGAAGTGAGGGAAACAAGTA
AATTCATTGGAGAAACTGTGGCTTCCACTGCCAAATCTGTATCAAAAATGACTAAAGAAGTAACAGAGAAGGTGTCTGATGCAACAGAGAAAGTAACAAAAACAGCAGAG
AACATAACAGAGAAAGCAAAGGACACTGTTTCAGGAGCATGGGGGACTGCAAAGAGCACTACTGAAGTTCTTAAAGATTTCATTGACAAGTAA
Protein sequenceShow/hide protein sequence
MSTLKQYTTKLSTLFTLSIAKPNGALGHKAFISSYPTLLKSKKVDEETVDACNKTKEAAEAVKESAKEVRETSKFIGETVASTAKSVSKMTKEVTEKVSDATEKVTKTAE
NITEKAKDTVSGAWGTAKSTTEVLKDFIDK