; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018757 (gene) of Chayote v1 genome

Gene IDSed0018757
OrganismSechium edule (Chayote v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationLG11:31750111..31750854
RNA-Seq ExpressionSed0018757
SyntenySed0018757
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601820.1 hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4771.05Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARR P     P+K + DH KD +R+NTLKDLFVSSPPYD         VA   
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT

Query:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        IR++ PV +  D  +G  TGW PGSPRPGWTGFR+KYLLRKTWRP+LAGIPE
Subjt:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-4771.05Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARR P     P+K + DH KD +R+NTLKDLFVSSPPYD         VA   
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT

Query:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        IR++ PV +  D  +G  TGW PGSPRPGWTGFR+KYLLRKTWRP+LAGIPE
Subjt:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

XP_022963063.1 uncharacterized protein LOC111463373 [Cucurbita moschata]1.8e-4569.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARR P     P+K + DH KD +R+NTLKDLFVSSPPYD         VA   
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT

Query:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        IR++ PV +  D  +G T+ W PGSPRPGWTGFR KYLLRKTWRP+LA IPE
Subjt:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

XP_022971824.1 uncharacterized protein LOC111470493 [Cucurbita maxima]2.5e-4772.48Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPTIRS
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARRR   P+K + DH KD +R+NTLKDLFVSSPPYD         VA   IR+
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPTIRS

Query:  LAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        + PV +  D  +G  TGW PGSPRPGWTGFR+KYLLRKTWRP+LAGIPE
Subjt:  LAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]4.2e-4771.05Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARR P     P+K + DH KD +R+NTLKDLFVSSPPYD         VA   
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT

Query:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        IR++ PV +  D  +G  TGW PGSPRPGWTGFR+KYLLRKTWRP+LAGIPE
Subjt:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein2.3e-4367.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPY---------DAVAPP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR S RR P     PE    D  K  +R+NTLKDLFVSSPPY          AV  P
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPY---------DAVAPP

Query:  TIRSLAPV--RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        T R++ PV  ++  +  VGS  GW PGSPRPGWTGFR+KYLLRKTWRPVL GIPE
Subjt:  TIRSLAPV--RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

A0A5D3BMD8 Uncharacterized protein2.0e-4267.52Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP----PSPEKIKPDHNKDFNRTNTLKDLFVSSPPY---------DAVA
        MASLLKFKLLPTH CGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR S RR P      PE  K D +K  +R+NTLKDLFVSSPPY          AV 
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP----PSPEKIKPDHNKDFNRTNTLKDLFVSSPPY---------DAVA

Query:  PPTIRSLAPV--RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
         PT ++  PV  ++  + RVGS  GW PGSPRPGWTGFR+KYLLRKTWRPVL GIPE
Subjt:  PPTIRSLAPV--RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

A0A6J1DFV6 uncharacterized protein LOC1110200643.1e-4369.48Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD---------AVAPP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR S RR P     P+K K DH  D  R+NTLKDLFVSSPPYD         A    
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD---------AVAPP

Query:  TIRSLAPV-RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
           +L PV ++  D  VGS TGW PGSPRP WTGFR+KYLLRKTWRPVLAGIPE
Subjt:  TIRSLAPV-RQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

A0A6J1HGM7 uncharacterized protein LOC1114633738.6e-4669.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARR P     P+K + DH KD +R+NTLKDLFVSSPPYD         VA   
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRP---PSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPT

Query:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        IR++ PV +  D  +G T+ W PGSPRPGWTGFR KYLLRKTWRP+LA IPE
Subjt:  IRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

A0A6J1I9M9 uncharacterized protein LOC1114704931.2e-4772.48Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPTIRS
        MASLLKFKLLPTHCGVAQSPTLSPRTSPL+ LRRRKTTLRMLLTR SARRR   P+K + DH KD +R+NTLKDLFVSSPPYD         VA   IR+
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYD--------AVAPPTIRS

Query:  LAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        + PV +  D  +G  TGW PGSPRPGWTGFR+KYLLRKTWRP+LAGIPE
Subjt:  LAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown2.1e-1240.37Show/hide
Query:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPS-----PEKIKPDHNKDFNRTNTLKDLFVSSPPYDAVA------PPTI
        SL KFKLL THC  VA+SPT     SP++ LRRRK TLR+LLTR S R R P       E  K D       +  L DLFVSSPP++           T 
Subjt:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPS-----PEKIKPDHNKDFNRTNTLKDLFVSSPPYDAVA------PPTI

Query:  RSLAPVRQVADARVGSTTGW----------LPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
          +   R V    V +  G+            GS RP  +      LLR++WRPVL  IPE
Subjt:  RSLAPVRQVADARVGSTTGW----------LPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

AT1G68430.1 unknown protein3.9e-1442Show/hide
Query:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYDAVAPPTIRSLAPVR
        MA+L +FK L T CGV AQSPT   SPRTSPL+ LRR+KTTL+MLL+  S  RR   P  +   H+KD      LKDLFVSS   +       R     +
Subjt:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYDAVAPPTIRSLAPVR

Query:  Q------VADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
        +       A     S          P W GF  K LL++ WRP L  I E
Subjt:  Q------VADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE

AT5G16200.1 50S ribosomal protein-related1.1e-0833.92Show/hide
Query:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTN-----------TLKDLFVS--SPPY-
        ++ L KFKL   H       A SPT+SP  SP+  LRRRK TLRML  + S  RR    + ++     D N  N            L++L V+  SPPY 
Subjt:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTN-----------TLKDLFVS--SPPY-

Query:  ------------DAVAPPTIRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE
                      ++P  + S    R++   R GS+     GS +     FR + +LRK WRPVL  IPE
Subjt:  ------------DAVAPPTIRSLAPVRQVADARVGSTTGWLPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCTTCTCAAATTCAAGCTCCTCCCCACCCACTGCGGCGTCGCTCAGAGCCCCACCTTAAGCCCCAGAACCAGCCCGCTCCTCCTCCTCCGCCGCCGCAAAAC
CACCCTCCGGATGCTCCTCACCCGCCGCTCCGCCCGCCGCCGCCCCCCCTCGCCGGAAAAGATCAAACCAGACCACAACAAGGACTTCAATCGGACCAACACCTTGAAGG
ATTTGTTCGTTTCTTCGCCGCCGTACGATGCGGTTGCGCCGCCGACGATCCGGAGTTTGGCGCCGGTTCGTCAGGTGGCGGATGCTCGGGTTGGATCGACCACCGGTTGG
CTTCCTGGTTCTCCTAGACCGGGATGGACCGGTTTCCGATTTAAGTACTTGCTCCGGAAAACCTGGCGGCCGGTGCTTGCCGGCATCCCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
AAGAAAGAGGAGAAACAAAAACCCAAAAAAAACCCAATTCCCAACGCCATTGCACAAAATCCTTTTCAAATTCCTTTCATCAATCATTACCGTTTTTCAAAATCACAAAC
CTCTCTATTTGTGTCTGTAACTCCAAACTACCAAAAATCCACAGCGCCGATTCGATTCCATGGCGTCGCTTCTCAAATTCAAGCTCCTCCCCACCCACTGCGGCGTCGCT
CAGAGCCCCACCTTAAGCCCCAGAACCAGCCCGCTCCTCCTCCTCCGCCGCCGCAAAACCACCCTCCGGATGCTCCTCACCCGCCGCTCCGCCCGCCGCCGCCCCCCCTC
GCCGGAAAAGATCAAACCAGACCACAACAAGGACTTCAATCGGACCAACACCTTGAAGGATTTGTTCGTTTCTTCGCCGCCGTACGATGCGGTTGCGCCGCCGACGATCC
GGAGTTTGGCGCCGGTTCGTCAGGTGGCGGATGCTCGGGTTGGATCGACCACCGGTTGGCTTCCTGGTTCTCCTAGACCGGGATGGACCGGTTTCCGATTTAAGTACTTG
CTCCGGAAAACCTGGCGGCCGGTGCTTGCCGGCATCCCTGAGTAACTGGTGCTTTTTTTTTTGTTTTTGTTTTTTTTTTATAATTGGTTTTGGAAATTATATATCTGATC
TAATATTTATCTCTTTTTTTAGTGCAGTTTTTATTTTGTTTTATTTACTTAAAATAGTGGGAAGGATTAAGATCTTAATCAAGG
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHCGVAQSPTLSPRTSPLLLLRRRKTTLRMLLTRRSARRRPPSPEKIKPDHNKDFNRTNTLKDLFVSSPPYDAVAPPTIRSLAPVRQVADARVGSTTGW
LPGSPRPGWTGFRFKYLLRKTWRPVLAGIPE