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Sed0018759 (gene) of Chayote v1 genome

Gene IDSed0018759
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationLG08:1894506..1896050
RNA-Seq ExpressionSed0018759
SyntenySed0018759
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]8.2e-1467.8Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFLKL
        TGPGPY V PP  D MQHGQ+QPY   VPPQGETK + VPP  +TK RGDGFCRG   L
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFLKL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]7.4e-1574.55Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG
        TGPGPY VAPPM D MQHGQ+QPY   VPPQGETK + VPP  +TK RGDGFCRG
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1351.16Show/hide
Query:  MYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFL---------------------------KLTQVIYWVSMNM
        M D MQHGQSQPYS+ +PPQGETKFQ V PPRET S+GDGFCRG L                           +LTQVI+WV ++M
Subjt:  MYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFL---------------------------KLTQVIYWVSMNM

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2056.7Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFL---------------------------KLTQVIYWVSMNM
        TGPGPYPVAPPM D MQHGQSQPYS+ +PPQGETKFQ V PPRET S+GDGFCRG L                           +LTQVI+WV ++M
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFL---------------------------KLTQVIYWVSMNM

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]1.4e-1883.64Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG
        TGPGPYPVAPPM D MQHGQSQPYS+ +PPQGETK QIV PPRET S+GDGFCRG
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein3.6e-1574.55Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG
        TGPGPY VAPPM D MQHGQ+QPY   VPPQGETK + VPP  +TK RGDGFCRG
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG

A0A5A7UV38 Uncharacterized protein4.0e-1467.8Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFLKL
        TGPGPY V PP  D MQHGQ+QPY   VPPQGETK + VPP  +TK RGDGFCRG   L
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFLKL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like7.0e-1983.64Show/hide
Query:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG
        TGPGPYPVAPPM D MQHGQSQPYS+ +PPQGETK QIV PPRET S+GDGFCRG
Subjt:  TGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCCTCGTTCCTTCATTTGACTTCACACATATTCCCCTTGAGGCAGTTGAGCAGTATTAAAAATGTTTTTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGGT
CTCTTGCTATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGTATGATCAAATGCAACATGGTCAGTCTCAGCCATACTCTACAACTGTACCTCCTCAAGGAGAAA
CCAAGTTTCAAATTGTACCTCCTCCAAGGGAAACCAAGTCTAGGGGTGATGGGTTTTGCAGAGGATTTTTGAAATTGACACAAGTAATCTACTGGGTTTCCATGAACATG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCCTCGTTCCTTCATTTGACTTCACACATATTCCCCTTGAGGCAGTTGAGCAGTATTAAAAATGTTTTTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGGT
CTCTTGCTATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGTATGATCAAATGCAACATGGTCAGTCTCAGCCATACTCTACAACTGTACCTCCTCAAGGAGAAA
CCAAGTTTCAAATTGTACCTCCTCCAAGGGAAACCAAGTCTAGGGGTGATGGGTTTTGCAGAGGATTTTTGAAATTGACACAAGTAATCTACTGGGTTTCCATGAACATG
TAG
Protein sequenceShow/hide protein sequence
MFASFLHLTSHIFPLRQLSSIKNVFCCYAVGVIILVVSCYTGPGPYPVAPPMYDQMQHGQSQPYSTTVPPQGETKFQIVPPPRETKSRGDGFCRGFLKLTQVIYWVSMNM