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Sed0018779 (gene) of Chayote v1 genome

Gene IDSed0018779
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:33439078..33439986
RNA-Seq ExpressionSed0018779
SyntenySed0018779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600765.1 hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2551.97Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------
        MENSA SRICT +Q  E       SSWTSS+DDLL FD         Q++A  S   DDDL+DTATSPP  +I S                         
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------

Query:  ----KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
            KGK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  ----KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

KAG7031402.1 hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2552.67Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------
        MENSA SRICT +Q  E       SSWTSS+DDLL FD         Q++A  S   DDDL+DTATSPP  +I S                         
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------

Query:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
          KGK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

XP_011652737.2 uncharacterized protein LOC105435073 [Cucumis sativus]1.4e-1945.71Show/hide
Query:  MENSASSRICTCEQEGEATSL-HQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI
        MENSA+SRIC+  +E     + H+  SW  +SS+DDLL FD                           Q SASS  +       DDDLEDTATSPP  +I
Subjt:  MENSASSRICTCEQEGEATSL-HQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI

Query:  TS----------------------KGKGSDGYGENEDRI-EVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF
         S                      KG GS+ YGE EDRI EVGFVGRDNN   CST LKNIGLCLVP+SMA+NYF
Subjt:  TS----------------------KGKGSDGYGENEDRI-EVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF

XP_022941575.1 uncharacterized protein LOC111446888 [Cucurbita moschata]1.1e-2452Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------
        MENSA SRICT +Q  +       SSWTSS+DDLL FD         Q++A  S   DDDL+DTATSPP  +I S                         
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------

Query:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
          KGK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

XP_022989755.1 uncharacterized protein LOC111486825 [Cucurbita maxima]4.1e-2451.33Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFDQSSASS-----SEVF-----DDDLEDTATSPPRLAITS------------------------
        MENSA S+ICT +Q  +       SSWTSS+DDLL FD S  +S     + VF     DDDL+DTATSPP  +I S                        
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFDQSSASS-----SEVF-----DDDLEDTATSPPRLAITS------------------------

Query:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
          +GK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

TrEMBL top hitse value%identityAlignment
A0A0A0L2F7 Uncharacterized protein6.6e-2045.71Show/hide
Query:  MENSASSRICTCEQEGEATSL-HQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI
        MENSA+SRIC+  +E     + H+  SW  +SS+DDLL FD                           Q SASS  +       DDDLEDTATSPP  +I
Subjt:  MENSASSRICTCEQEGEATSL-HQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI

Query:  TS----------------------KGKGSDGYGENEDRI-EVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF
         S                      KG GS+ YGE EDRI EVGFVGRDNN   CST LKNIGLCLVP+SMA+NYF
Subjt:  TS----------------------KGKGSDGYGENEDRI-EVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF

A0A1S3CKU1 uncharacterized protein LOC1035016011.5e-1945.14Show/hide
Query:  MENSASSRICTCEQEGEA-TSLHQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI
        MENSA+SRIC+  +E     + H+  SW  +SS+DDLL FD                           Q+SASS  +       DDDLEDTATSPP  +I
Subjt:  MENSASSRICTCEQEGEA-TSLHQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI

Query:  TS----------------------KGKGSDGYGENEDR-IEVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF
         S                      KGKGS+ YGE EDR I+VG VGRDNN   CST LKNIGLCLVP+SMA+NYF
Subjt:  TS----------------------KGKGSDGYGENEDR-IEVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF

A0A5D3BKS2 Putative CTD small phosphatase-like protein 21.5e-1945.14Show/hide
Query:  MENSASSRICTCEQEGEA-TSLHQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI
        MENSA+SRIC+  +E     + H+  SW  +SS+DDLL FD                           Q+SASS  +       DDDLEDTATSPP  +I
Subjt:  MENSASSRICTCEQEGEA-TSLHQGSSW--TSSIDDLLFFD---------------------------QSSASSSEV------FDDDLEDTATSPPRLAI

Query:  TS----------------------KGKGSDGYGENEDR-IEVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF
         S                      KGKGS+ YGE EDR I+VG VGRDNN   CST LKNIGLCLVP+SMA+NYF
Subjt:  TS----------------------KGKGSDGYGENEDR-IEVGFVGRDNN---CSTWLKNIGLCLVPLSMAVNYF

A0A6J1FU25 uncharacterized protein LOC1114468885.2e-2552Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------
        MENSA SRICT +Q  +       SSWTSS+DDLL FD         Q++A  S   DDDL+DTATSPP  +I S                         
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFD---------QSSASSSEVFDDDLEDTATSPPRLAITS-------------------------

Query:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
          KGK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

A0A6J1JN91 uncharacterized protein LOC1114868252.0e-2451.33Show/hide
Query:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFDQSSASS-----SEVF-----DDDLEDTATSPPRLAITS------------------------
        MENSA S+ICT +Q  +       SSWTSS+DDLL FD S  +S     + VF     DDDL+DTATSPP  +I S                        
Subjt:  MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFDQSSASS-----SEVF-----DDDLEDTATSPPRLAITS------------------------

Query:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG
          +GK  + +GE EDRIEVGFVGRDNNCST LKNIGLCLVP+SMA+NYFG
Subjt:  --KGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAVNYFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACTCGGCCAGCTCCCGAATCTGCACGTGCGAGCAGGAGGGCGAAGCGACATCGTTACACCAGGGCAGTAGCTGGACTTCCTCTATTGATGATCTCCTCTTCTT
TGACCAAAGTTCTGCTAGTTCATCGGAGGTCTTCGATGATGATCTTGAAGATACTGCCACTTCTCCTCCTCGTCTTGCCATAACTTCCAAGGGAAAAGGAAGTGATGGAT
ATGGGGAGAATGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAACAACTGTAGCACATGGCTGAAGAATATTGGTCTTTGTTTAGTTCCTTTATCTATGGCTGTC
AATTATTTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACTCGGCCAGCTCCCGAATCTGCACGTGCGAGCAGGAGGGCGAAGCGACATCGTTACACCAGGGCAGTAGCTGGACTTCCTCTATTGATGATCTCCTCTTCTT
TGACCAAAGTTCTGCTAGTTCATCGGAGGTCTTCGATGATGATCTTGAAGATACTGCCACTTCTCCTCCTCGTCTTGCCATAACTTCCAAGGGAAAAGGAAGTGATGGAT
ATGGGGAGAATGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAACAACTGTAGCACATGGCTGAAGAATATTGGTCTTTGTTTAGTTCCTTTATCTATGGCTGTC
AATTATTTTGGTTAA
Protein sequenceShow/hide protein sequence
MENSASSRICTCEQEGEATSLHQGSSWTSSIDDLLFFDQSSASSSEVFDDDLEDTATSPPRLAITSKGKGSDGYGENEDRIEVGFVGRDNNCSTWLKNIGLCLVPLSMAV
NYFG